CK932734

Overview
NameCK932734
Unique NameCK932734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23
Identity = 61/160 (38.12%), Postives = 98/160 (61.25%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRI------LKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IENATNRQVTFSKRR GL KKA EL +LCDA+V ++I SST K  EY SP+ + ++L++ YQ      + ++H+E++  +     ++ R+      L   IR+  G+ L++LTL ++  LEQ +   +  +   K Q+L +Q++  +RK   ++ +N  L
Sbjct:   11 IENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ-----TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFL 165          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23
Identity = 69/184 (37.50%), Postives = 105/184 (57.07%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVN-----RILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYE 557
            IEN  NRQVTFSKRR+GL KKA E+++LCDA+V+++I S+  K +EY + S   K +L+ Y++        S+ EK+L +  +  Q N     R LK ++       +  MGE L  L L+EL  LEQ + + LK I   K Q++   IN  +RK + +Q+ENK LQ   +   K +    +++
Sbjct:   11 IENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDK-ILERYER-------YSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWD 186          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.115e-22
Identity = 68/184 (36.96%), Postives = 105/184 (57.07%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVN-----RILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYE 557
            IEN  NRQVTFSKRR+GL KKA E+++LCDA+V+++I S+  K ++Y + S   K +L+ Y++        S+ EK+L +  +  Q N     R LK ++       +  MGE L  L L+EL  LEQ + + LK I   K Q++   IN  +RK + +Q+ENK LQ   +   K +    +++
Sbjct:   11 IENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDK-ILERYER-------YSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWD 186          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.762e-22
Identity = 54/133 (40.60%), Postives = 81/133 (60.90%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVL 440
            IENA NR VTFSKRRNGL KKA+E+T+LCDAKV+++I +S  K  +Y  PS     +LD YQK     LW + +E +   +  +++ N  L+ ++R   GE +  L L+ L  +E  I  GL  + + + ++L
Sbjct:   11 IENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEIL 143          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.712e-22
Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKT----LRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            I+N+T+RQVTFSKRRNG+FKKA+EL ILCDA+V ++I SST + +EY   ST+ K ++D Y K+      +   +S  +       ++ Q    L++  RQ MGE L+ L ++EL  LE  +   L+ +   KD VL  +I+   RK   V +EN  L
Sbjct:   11 IDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY--SSTSMKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMEL 166          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.791e-21
Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLE---NLGAVEQVN--RILKK------QIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            I+N+T RQVTFSKRR GLFKKA EL++LCDA V+++I SST K  +Y   S++ KQ+L+      R DL S + EK+ +    L  VE  N  R+ K+      ++RQ  GE L  L +EEL  LE+ +  GL  + E K   + R+IN  ++K   + +EN+ L+
Sbjct:   11 IDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDY--SSSSMKQILE------RRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLR 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.054e-21
Identity = 62/175 (35.43%), Postives = 94/175 (53.71%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDL------------WSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAK 530
            IEN  NRQVTFSKRRNGL KKA E+++LCDA+V+ ++ S   K +EY + S   K +L+ Y++    +             W   Y K+   +  +++ ++ L       MGE L  L L+EL  LEQ +   LK I   K  ++   I+  ++K R +Q+ENK+LQ   +   K
Sbjct:   11 IENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDK-ILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHL-------MGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQK 177          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.054e-21
Identity = 55/154 (35.71%), Postives = 93/154 (60.39%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN++NRQVT+SKRRNG+ KKA+E+++LCDA+VS++I +S+ K HE+   ST+   +LD Y K     LW + +E +   +  V++ N  ++ ++R   GE +  L   EL  LE  + +GL  I   ++ +L       ++K + +++E   L
Sbjct:   11 IENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF--SSTSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLL----RMMRKKTQSMEEEQDQL 158          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.054e-21
Identity = 73/209 (34.93%), Postives = 111/209 (53.11%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK--------------TLRIDLWS-SHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ----DGF----IINAKEEDPHYEYELVDNGEHCDSDFGF 599
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+  K +E+ S S+  +  L+ YQK               L ++L S   Y K+ E   A+++  R L       +GE L  L+ +EL  LE+ +   LK I   + Q +  Q+N  + K R + + NK+L+    DG+     +N  +ED H +Y   D  +  +S   F
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIR-TLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNL-------LGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLRLRLADGYQMPLQLNPNQEDHHVDYGRHDQQQQQNSHHAF 211          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20
Identity = 63/159 (39.62%), Postives = 96/159 (60.38%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAV----EQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IENA +RQVTFSKRR+GL KKAREL++LCDA+V++++ S + K  EY   ST  KQ L  Y      +  SS   K  E+   V    +Q++++ +K + Q  G+ LN LT +EL  LEQ +   L  + E K+++L  Q+   + K +  + EN++L+
Sbjct:   11 IENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY--SSTGMKQTLSRYG-----NHQSSSASKAEEDCAEVDILKDQLSKLQEKHL-QLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLR 161          
The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAD29_ORYSJ9.495e-2338.13MADS-box transcription factor 29 OS=Oryza sativa s... [more]
MAD14_ORYSJ9.495e-2337.50MADS-box transcription factor 14 OS=Oryza sativa s... [more]
MAD14_ORYSI2.115e-2236.96MADS-box transcription factor 14 OS=Oryza sativa s... [more]
PIST_ARATH2.762e-2240.60Floral homeotic protein PISTILLATA OS=Arabidopsis ... [more]
MAD27_ORYSJ4.712e-2240.51MADS-box transcription factor 27 OS=Oryza sativa s... [more]
JOIN_SOLLC1.791e-2141.57MADS-box protein JOINTLESS OS=Solanum lycopersicum... [more]
MAD15_ORYSJ3.054e-2135.43MADS-box transcription factor 15 OS=Oryza sativa s... [more]
GLOB_TOBAC3.054e-2135.71Floral homeotic protein GLOBOSA OS=Nicotiana tabac... [more]
AGL9_SINAL3.054e-2134.93Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
AGL15_ARATH1.161e-2039.62Agamous-like MADS-box protein AGL15 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bp
GGGGGGGGAAAATGGGTAGAGGAAAGATGGAGATGAAGAGGATTGAGAAC
GCAACGAACAGGCAGGTGACATTCTCAAAGAGACGAAATGGGCTTTTCAA
GAAAGCTCGTGAACTCACCATTCTCTGTGATGCCAAGGTTTCCATTCTCA
TCTGTTCAAGCACTGCTAAGGCCCATGAATACATCAGCCCTTCCACTACA
ACAAAGCAATTGCTTGATTTGTATCAGAAGACTTTAAGAATCGATCTTTG
GAGCTCTCATTATGAGAAAATGCTAGAGAATCTGGGGGCTGTGGAACAAG
TGAATAGGATTCTGAAGAAGCAAATTAGGCAGAGGATGGGTGAAAGCTTG
AACGATCTGACCTTGGAGGAATTGACTGGTCTTGAGCAAGATATCCTTGA
TGGTTTAAAGATTATTCATGAATGCAAGGATCAGGTGCTCGCGAGACAGA
TTAATACTTTCAAGAGAAAGGTAAGGGGTGTGCAAAAAGAGAACAAAAGT
CTTCAGGATGGATTTATCATTAATGCTAAAGAGGAGGATCCGCACTATGA
GTATGAGTTAGTTGATAACGGTGAGCATTGTGATTCTGATTTTGGATTCC
AAAATGAAGGTCCTGGCATATTTGCTTTACGCTTGCAGCCTAACTAAGCC
TAAAGTACCCAGTGGACGAAGACTGAGTAGCATGTGAGATGACTTAGCAT
TATCAATACATTAAGTTACCAACACACTATAAGTATGAGAATTTGATGAA
GTGTTTTAAATATGGTAAGAATCACCTTGTTTTAGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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