CK932734

Overview
NameCK932734
Unique NameCK932734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20
Identity = 66/162 (40.74%), Postives = 94/162 (58.02%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSH------YEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQD 509
            IENAT+RQVTFSKRRNGL KKA EL++LCDA+V+++I S   K +E+ S S+  K  ++ YQK ++ DL S+H       +   E  G   ++   L+   R+ MGE L+  ++EEL  LE  +   L  I   K Q+L  +    K K R +  ENK L +
Sbjct:   11 IENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPK-TVERYQKRIQ-DLGSNHKRNDNSQQSKDETYGLARKIEH-LEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLME 169          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.516e-20
Identity = 68/206 (33.01%), Postives = 112/206 (54.37%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTT-----KQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELVDNGEHCDSDFGFQNEGPGIFALRLQPN 644
            IEN+TNRQVTFSKRR G+ KKARE+ +LCDA+V ++I SS  K  +Y +P TT+      ++L+ YQ      LW   ++ +   +  V++ N  ++ ++R   GE LN L  +EL  +E+ + +G       +D+++       KR  + ++ E+K L   F ++ +E +       ++ G H D D  F    P  F  R+QP+
Sbjct:   11 IENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQA---NLRDKMMDHW-RMHKRNEKMLEDEHKML--AFRVHQQEVELSGGIRELELGYHHD-DRDFAASMP--FTFRVQPS 207          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 55/154 (35.71%), Postives = 93/154 (60.39%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN++NRQVT+SKRRNG+ KKA+E+++LCDA+VS++I +S+ K HE+   ST+   +LD Y K     L  + +E +   +  V++ N  ++ ++R   GE +  L   EL  LE  + +GL  I   +++VL       ++K + +++E   L
Sbjct:   11 IENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF--SSTSLVDILDQYHKLTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVL----RMMRKKTQSMEEEQDQL 158          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 61/148 (41.22%), Postives = 91/148 (61.49%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTL----RIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKV 473
            I+NAT+RQVTFSKRR+GLFKKAREL+ILCDA+V +L+ SST++ +++ S S   K +++ Y +T     +    SS  +   +   ++ Q    L++  RQ +G+ L+ L +E+L  LE  +   LK I   KD V+  QI    RKV
Sbjct:   11 IDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSS--MKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKV 156          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 59/160 (36.88%), Postives = 95/160 (59.38%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK-----TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTFSKRRNGL KKA E+++LCDA V++++ S+  K +E+ S S + + +L+ YQ+        ++  +   E   +  G ++     L+K  RQ +GE L+ LT++EL  LE  +   LK I   K+Q+L   I+  ++K + ++ +N  LQ
Sbjct:   11 IENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHS-SMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ 169          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 59/160 (36.88%), Postives = 95/160 (59.38%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK-----TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTFSKRRNGL KKA E+++LCDA V++++ S+  K +E+ S S + + +L+ YQ+        ++  +   E   +  G ++     L+K  RQ +GE L+ LT++EL  LE  +   LK I   K+Q+L   I+  ++K + ++ +N  LQ
Sbjct:   11 IENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHS-SMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ 169          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 59/168 (35.12%), Postives = 92/168 (54.76%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDL--------------WSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN  NRQVTFSKRR GL KKA+E+++LCDA+VS+++ S   K  EY S S   K +L+ Y++    +               WS  Y ++   +        +L++  R  +GE L  ++L++L  LEQ +   LK I   K+Q++   +N  +RK + +Q+EN  L
Sbjct:   11 IENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEK-VLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKI-------ELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSML 170          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20
Identity = 62/159 (38.99%), Postives = 93/159 (58.49%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLW-----SSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            I+++T+RQVTFSKRR GL KKA+EL ILCDA+V ++I SST K +++ S S   K ++D Y K+ +I+       +S  +        + Q    L++  RQ MGE LN L++ EL  LE  I   L+ I   K+Q+L ++I    +K   + +EN  L
Sbjct:   11 IDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSS--MKSVIDRYNKS-KIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDL 166          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20
Identity = 58/143 (40.56%), Postives = 84/143 (58.74%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKM------LENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQI 452
            IEN TNRQVTFSKRR GL KKA EL ILCDA++ +++ S T K +EY SP      + D Y K       S+ +E+M      ++ +  ++  N  L+  +RQ MG+ L  LTL++++ LEQ I   L  +   K Q+L +Q+
Sbjct:   11 IENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAP-----STRFEEMDVQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQL 148          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20
Identity = 61/160 (38.12%), Postives = 93/160 (58.13%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLW------SSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN  NRQVTFSKRR+GL KKA E+++LCDA+V++++ SS  K  EY S  +  +++L+ Y + L  D        S     +LE+     +V  +L+K  R  MGE L+ L+L+EL  LE  +   +K I   K+Q +   I+  ++K + +Q  N SL
Sbjct:   11 IENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEY-STDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARV-EVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSL 168          
The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
AGL14_ARATH1.161e-2040.74Agamous-like MADS-box protein AGL14 OS=Arabidopsis... [more]
MADS4_ORYSJ1.516e-2033.01MADS-box transcription factor 4 OS=Oryza sativa su... [more]
FBP1_PETHY2.586e-2035.71Floral homeotic protein FBP1 OS=Petunia hybrida GN... [more]
MAD23_ORYSJ3.377e-2041.22MADS-box transcription factor 23 OS=Oryza sativa s... [more]
MAD18_ORYSJ3.377e-2036.88MADS-box transcription factor 18 OS=Oryza sativa s... [more]
MAD18_ORYSI3.377e-2036.88MADS-box transcription factor 18 OS=Oryza sativa s... [more]
CAL_ARATH3.377e-2035.12Transcription factor CAULIFLOWER OS=Arabidopsis th... [more]
AGL21_ARATH3.377e-2038.99Agamous-like MADS-box protein AGL21 OS=Arabidopsis... [more]
MAD31_ORYSJ4.410e-2040.56MADS-box transcription factor 31 OS=Oryza sativa s... [more]
AGL8_ARATH4.410e-2038.13Agamous-like MADS-box protein AGL8 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bp
GGGGGGGGAAAATGGGTAGAGGAAAGATGGAGATGAAGAGGATTGAGAAC
GCAACGAACAGGCAGGTGACATTCTCAAAGAGACGAAATGGGCTTTTCAA
GAAAGCTCGTGAACTCACCATTCTCTGTGATGCCAAGGTTTCCATTCTCA
TCTGTTCAAGCACTGCTAAGGCCCATGAATACATCAGCCCTTCCACTACA
ACAAAGCAATTGCTTGATTTGTATCAGAAGACTTTAAGAATCGATCTTTG
GAGCTCTCATTATGAGAAAATGCTAGAGAATCTGGGGGCTGTGGAACAAG
TGAATAGGATTCTGAAGAAGCAAATTAGGCAGAGGATGGGTGAAAGCTTG
AACGATCTGACCTTGGAGGAATTGACTGGTCTTGAGCAAGATATCCTTGA
TGGTTTAAAGATTATTCATGAATGCAAGGATCAGGTGCTCGCGAGACAGA
TTAATACTTTCAAGAGAAAGGTAAGGGGTGTGCAAAAAGAGAACAAAAGT
CTTCAGGATGGATTTATCATTAATGCTAAAGAGGAGGATCCGCACTATGA
GTATGAGTTAGTTGATAACGGTGAGCATTGTGATTCTGATTTTGGATTCC
AAAATGAAGGTCCTGGCATATTTGCTTTACGCTTGCAGCCTAACTAAGCC
TAAAGTACCCAGTGGACGAAGACTGAGTAGCATGTGAGATGACTTAGCAT
TATCAATACATTAAGTTACCAACACACTATAAGTATGAGAATTTGATGAA
GTGTTTTAAATATGGTAAGAATCACCTTGTTTTAGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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