CK932734

Overview
NameCK932734
Unique NameCK932734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20
Identity = 65/180 (36.11%), Postives = 101/180 (56.11%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLW------SSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELV 563
            IEN  NRQVTFSKRR+GL KKA E+++LCDA+V+++I SS  K  EY S  +  +++L+ Y + L  D        S     +LE+     +V  +L+K  R  MGE L+ L+L+EL  LE  +   +K I   K+Q +   I+  ++K + +Q  N +L    I   ++   H E +L+
Sbjct:   11 IENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEY-STDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARV-EVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKK-IKEREKNTVHQEVQLI 187          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.283e-19
Identity = 66/166 (39.76%), Postives = 93/166 (56.02%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEK---------MLENLGAVEQVNRILKK--QIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            I+NAT RQVTFSKRR GLFKKA EL++LCDA V+++I SST K  E+ S S   K++L+      R +L S + EK         ++EN         I  K  ++RQ  GE L  L +EEL  LE+ +  GL  + E K   +  +I+  ++K   +  ENK L+
Sbjct:   11 IDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSS--MKEVLE------RHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLR 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.189e-19
Identity = 71/208 (34.13%), Postives = 109/208 (52.40%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK--------------TLRIDLWS-SHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ----DGF-----IINAKEEDPHYEYELVDNGEHCDSDF 593
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+  K +E+ S S++  + L+ YQK               L ++L S   Y K+ E   A+++  R L       +GE L  L+ +EL  LE+ +   LK I   + Q +  Q+N  + K R + + NK+L+    DG+     +   +EE  HY        +H  + F
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNL-------LGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQMPLQLNPNQEEVDHYGRHHHQQQQHSQAFF 210          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.189e-19
Identity = 62/167 (37.13%), Postives = 92/167 (55.09%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLY-----------QKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQD 509
            IE+A  RQVTFSKRR GLFKKA EL++LCDA V++++ SST K   + S S    +++D Y           Q +L ++L  S Y  + E L            ++RQ  GE L  L+++EL  LE+++  GL  +   KDQ    QI+  +RK   + +EN  L++
Sbjct:   11 IESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS--MNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEA-------SLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRN 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.859e-19
Identity = 60/165 (36.36%), Postives = 100/165 (60.61%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSH------YEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFI 518
            IENAT+RQVTFSKRRNGL KKA EL++LCDA+V+++I S  +K +E+ S S      ++ YQ+ ++ ++ ++H       +   E  G  +++ + L+   R+ +GE ++  ++EEL  LE  +   L  I   K Q+L  +I   K + R + KENK L++ ++
Sbjct:   11 IENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAA--TIERYQRRIK-EIGNNHKRNDNSQQARDETSGLTKKIEQ-LEISKRKLLGEGIDACSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWL 171          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.734e-19
Identity = 54/156 (34.62%), Postives = 88/156 (56.41%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKT--LRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN T RQVTFSKRR GL KK REL+ILCDA + +++ S+T K  E+ S      QL+D Y  T  LR+       E++   +  + +    L+ ++R   G  L  +   EL GLE+ +   +  + E K++++ +Q+    RK R ++++N ++
Sbjct:   11 IENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNM 166          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.876e-19
Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHY-EKMLENL--GAVEQVNRI--LKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQD 509
            IENAT+RQVTFSKRRNGL KKA EL++LCDA+VS++I S   K +E+   S+  +  +D Y +  +  + +    E+ +++L   A   + +I  L+   R+ +GE +   ++EEL  +EQ +   +K I   K QV   QI   K+K + +  EN+ L +
Sbjct:   11 IENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEF--ASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSE 169          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 60/202 (29.70%), Postives = 109/202 (53.96%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRI-----DLWSSH--YEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIIN----AKEEDPHYEYELVDNGEHCDSDFGFQNEGP 614
            IEN T+RQVTFSKRR+GL KK  EL++LCDA++ +++ S+  K  EY +P  + KQ++D Y K   I     +    H   +++++ L  +++    L+  +++  G+ L+ +  EELT LE+ +   L  +   K ++L  Q+   KR    ++KEN+ +    + N      E + H++ +++   +  +      NE P
Sbjct:   11 IENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEMYHWLMSNQIQRQAEVEHHHQQQVMTELKLVEQQQPLMNEFP 212          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.318e-19
Identity = 64/218 (29.36%), Postives = 117/218 (53.67%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKT--------LRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDP--------HYEYELVDNGEHCDSDFGFQN--EGPGIFALRLQP 641
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ SS  + +EY + S   K  ++ Y+K            ++ + HY++  E+    +Q++ +     R  +G+S+N ++L +L  +E  +  G+  I   K+++L  ++   +++   +Q +N  L+   + N + + P          EY+ + N  +   +F   N  + P  +A +LQP
Sbjct:   11 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS--VKSTVERYKKANSDTSNSGTVAEVNAQHYQQ--ESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERGQQPLNMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQPQHYAHQLQP 224          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.318e-19
Identity = 56/166 (33.73%), Postives = 91/166 (54.82%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDL------------WSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN  NRQVTFSKRR GL KKA E+++LCDA+V++++ S   K  EY S  +  +++L+ Y++    +             WS  Y ++   +        +L++  R  +GE L  ++ +EL  LEQ +   LK I   K+Q++   IN  +RK + +Q++N  L
Sbjct:   11 IENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-STDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKI-------ELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSML 168          
The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
AGL8_SINAL9.825e-2036.11Agamous-like MADS-box protein AGL8 homolog OS=Sina... [more]
SVP_ARATH1.283e-1939.76MADS-box protein SVP OS=Arabidopsis thaliana GN=SV... [more]
SEP3_ARATH2.189e-1934.13Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
MAD22_ORYSJ2.189e-1937.13MADS-box transcription factor 22 OS=Oryza sativa s... [more]
AGL19_ARATH2.859e-1936.36Agamous-like MADS-box protein AGL19 OS=Arabidopsis... [more]
TT16_ARATH3.734e-1934.62Protein TRANSPARENT TESTA 16 OS=Arabidopsis thalia... [more]
SOC1_ARATH4.876e-1937.27MADS-box protein SOC1 OS=Arabidopsis thaliana GN=S... [more]
DEF21_ANTMA6.369e-1929.70MADS-box protein defh21 OS=Antirrhinum majus GN=DE... [more]
MADS3_ORYSJ8.318e-1929.36MADS-box transcription factor 3 OS=Oryza sativa su... [more]
AP1_SINAL8.318e-1933.73Floral homeotic protein APETALA 1 OS=Sinapis alba ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bp
GGGGGGGGAAAATGGGTAGAGGAAAGATGGAGATGAAGAGGATTGAGAAC
GCAACGAACAGGCAGGTGACATTCTCAAAGAGACGAAATGGGCTTTTCAA
GAAAGCTCGTGAACTCACCATTCTCTGTGATGCCAAGGTTTCCATTCTCA
TCTGTTCAAGCACTGCTAAGGCCCATGAATACATCAGCCCTTCCACTACA
ACAAAGCAATTGCTTGATTTGTATCAGAAGACTTTAAGAATCGATCTTTG
GAGCTCTCATTATGAGAAAATGCTAGAGAATCTGGGGGCTGTGGAACAAG
TGAATAGGATTCTGAAGAAGCAAATTAGGCAGAGGATGGGTGAAAGCTTG
AACGATCTGACCTTGGAGGAATTGACTGGTCTTGAGCAAGATATCCTTGA
TGGTTTAAAGATTATTCATGAATGCAAGGATCAGGTGCTCGCGAGACAGA
TTAATACTTTCAAGAGAAAGGTAAGGGGTGTGCAAAAAGAGAACAAAAGT
CTTCAGGATGGATTTATCATTAATGCTAAAGAGGAGGATCCGCACTATGA
GTATGAGTTAGTTGATAACGGTGAGCATTGTGATTCTGATTTTGGATTCC
AAAATGAAGGTCCTGGCATATTTGCTTTACGCTTGCAGCCTAACTAAGCC
TAAAGTACCCAGTGGACGAAGACTGAGTAGCATGTGAGATGACTTAGCAT
TATCAATACATTAAGTTACCAACACACTATAAGTATGAGAATTTGATGAA
GTGTTTTAAATATGGTAAGAATCACCTTGTTTTAGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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