CK932734

Overview
NameCK932734
Unique NameCK932734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18
Identity = 60/164 (36.59%), Postives = 99/164 (60.37%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQ---------KTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN T+RQVTFSKRRNGL KKA EL++LCDA+V++++ S   + +E+ S + + ++ +D Y+         KT++ D+     +   + LG  +++   L +  R+ +GE+L   ++EEL GLE  +   L  I   K ++L RQI   K K R + K+N++L+
Sbjct:   11 IENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS-APSLQKTIDRYKAYTKDHVNNKTIQQDI----QQVKDDTLGLAKKL-EALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLR 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 60/175 (34.29%), Postives = 94/175 (53.71%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLY----------QKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEE 536
            I+N+T+RQVTFSKRRNGL KKA+EL+ILCDA+V +++ SST + +E+   ST  K ++D Y            T  I +W      + + L         L++  +Q MGE L+ L + +L GLE  +   L+ I   KD +L  +I     K   + +EN  L     + ++++
Sbjct:   11 IDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF--SSTNMKTVIDRYTNAKEELLGGNATSEIKIWQREAASLRQQL-------HNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQK 176          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 51/157 (32.48%), Postives = 90/157 (57.32%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPST-TTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQD 509
            IEN T RQ TF KRR+GLFKKAREL +LCDA + +L+ S++ K + ++SP+  + ++ ++ Y+ T    +W+   ++    L  V  +  +L+KQ+R    +   + T+  L  LE ++   ++ +   KD+ +  +I   +  +RG Q+E   L D
Sbjct:   11 IENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYGLCD 167          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18
Identity = 60/164 (36.59%), Postives = 90/164 (54.88%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKT----LRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFII 521
            I+N  NRQVTFSKRR GL KKAREL ILCDA V +++ S T + +++   S++ K +++ YQ+      R+    S  +     +  + Q  + L    RQ +GE +++ T+ +L  L+  +   L  I   KDQ+LA +I     K   VQKEN  L+  F I
Sbjct:   11 IDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF--SSSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNI 172          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+  K +E+ S  + TK  L+ YQK       ++   +  E L A       LK ++       R  +GE L+ L ++EL  LE+ +   LK +   + + L  Q+   +RK + V + N+ L+
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTK-TLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 171          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+  K +E+ S  + TK  L+ YQK       ++   +  E L A       LK ++       R  +GE L+ L ++EL  LE+ +   LK +   + + L  Q+   +RK + V + N+ L+
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTK-TLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 171          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18
Identity = 55/166 (33.13%), Postives = 91/166 (54.82%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDL------------WSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN  NRQVTFSKRR GL KKA E+++LCDA+V++++ S   K  EY S  +  +++L+ Y++    +             WS  Y ++   +        +L++  R  +GE L  ++ +EL  LEQ +   LK I   K+Q++   IN  ++K + +Q++N  L
Sbjct:   11 IENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-STDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKI-------ELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSML 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18
Identity = 59/164 (35.98%), Postives = 99/164 (60.37%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQ---------KTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN T+RQVTFSKRRNGL KKA EL++LCDA+V++++ S   + +E+ S + + ++ +D Y+         KT++ D+     +   + LG  +++   L +  R+ +GE+L   ++EEL GLE  +   L  I   K ++L +QI   K K R + K+N++L+
Sbjct:   11 IENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS-APSLQKTIDRYKAYTKDHVNNKTIQQDI----QQVKDDTLGLAKKL-EALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18
Identity = 55/160 (34.38%), Postives = 90/160 (56.25%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTL-----RIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ S+  + +EY + S   K  ++ Y+K          +  ++ +   +    + Q    ++K  R  MGESL  LT+ +L GLE  +  G+  I   K+++L  +I   ++K   +   N+ L+
Sbjct:   27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNS--VKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLR 184          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18
Identity = 54/166 (32.53%), Postives = 92/166 (55.42%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRID------------LWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN  NRQVTFSKRR+GL KKA E+++LCDA+V +++ S+  K  EY + S   +++L+ Y++    +             W+  + K+   L        +L++  +  +GE L  L+++EL  LE  +   LK I   K+Q++   I+  ++K R +Q++N  L
Sbjct:   11 IENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS-CMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARL-------EVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQL 168          
The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAD56_ORYSI1.086e-1836.59MADS-box transcription factor 56 OS=Oryza sativa s... [more]
MAD57_ORYSJ1.419e-1834.29MADS-box transcription factor 57 OS=Oryza sativa s... [more]
MAD32_ORYSJ1.419e-1832.48MADS-box transcription factor 32 OS=Oryza sativa s... [more]
MAD25_ORYSJ1.419e-1836.59MADS-box transcription factor 25 OS=Oryza sativa s... [more]
MADS7_ORYSJ1.853e-1836.42MADS-box transcription factor 7 OS=Oryza sativa su... [more]
MADS7_ORYSI1.853e-1836.42MADS-box transcription factor 7 OS=Oryza sativa su... [more]
AP1_ARATH1.853e-1833.13Floral homeotic protein APETALA 1 OS=Arabidopsis t... [more]
MAD56_ORYSJ2.420e-1835.98MADS-box transcription factor 56 OS=Oryza sativa s... [more]
AG_PANGI2.420e-1834.38Floral homeotic protein AGAMOUS OS=Panax ginseng G... [more]
AGL8_SOLLC2.420e-1832.53Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bp
GGGGGGGGAAAATGGGTAGAGGAAAGATGGAGATGAAGAGGATTGAGAAC
GCAACGAACAGGCAGGTGACATTCTCAAAGAGACGAAATGGGCTTTTCAA
GAAAGCTCGTGAACTCACCATTCTCTGTGATGCCAAGGTTTCCATTCTCA
TCTGTTCAAGCACTGCTAAGGCCCATGAATACATCAGCCCTTCCACTACA
ACAAAGCAATTGCTTGATTTGTATCAGAAGACTTTAAGAATCGATCTTTG
GAGCTCTCATTATGAGAAAATGCTAGAGAATCTGGGGGCTGTGGAACAAG
TGAATAGGATTCTGAAGAAGCAAATTAGGCAGAGGATGGGTGAAAGCTTG
AACGATCTGACCTTGGAGGAATTGACTGGTCTTGAGCAAGATATCCTTGA
TGGTTTAAAGATTATTCATGAATGCAAGGATCAGGTGCTCGCGAGACAGA
TTAATACTTTCAAGAGAAAGGTAAGGGGTGTGCAAAAAGAGAACAAAAGT
CTTCAGGATGGATTTATCATTAATGCTAAAGAGGAGGATCCGCACTATGA
GTATGAGTTAGTTGATAACGGTGAGCATTGTGATTCTGATTTTGGATTCC
AAAATGAAGGTCCTGGCATATTTGCTTTACGCTTGCAGCCTAACTAAGCC
TAAAGTACCCAGTGGACGAAGACTGAGTAGCATGTGAGATGACTTAGCAT
TATCAATACATTAAGTTACCAACACACTATAAGTATGAGAATTTGATGAA
GTGTTTTAAATATGGTAAGAATCACCTTGTTTTAGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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