CK932734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18 Identity = 60/164 (36.59%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQ---------KTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN T+RQVTFSKRRNGL KKA EL++LCDA+V++++ S + +E+ S + + ++ +D Y+ KT++ D+ + + LG +++ L + R+ +GE+L ++EEL GLE + L I K ++L RQI K K R + K+N++L+ Sbjct: 11 IENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS-APSLQKTIDRYKAYTKDHVNNKTIQQDI----QQVKDDTLGLAKKL-EALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLR 168
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18 Identity = 60/175 (34.29%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLY----------QKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEE 536 I+N+T+RQVTFSKRRNGL KKA+EL+ILCDA+V +++ SST + +E+ ST K ++D Y T I +W + + L L++ +Q MGE L+ L + +L GLE + L+ I KD +L +I K + +EN L + ++++ Sbjct: 11 IDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF--SSTNMKTVIDRYTNAKEELLGGNATSEIKIWQREAASLRQQL-------HNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQK 176
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18 Identity = 51/157 (32.48%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPST-TTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQD 509 IEN T RQ TF KRR+GLFKKAREL +LCDA + +L+ S++ K + ++SP+ + ++ ++ Y+ T +W+ ++ L V + +L+KQ+R + + T+ L LE ++ ++ + KD+ + +I + +RG Q+E L D Sbjct: 11 IENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYGLCD 167
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.419e-18 Identity = 60/164 (36.59%), Postives = 90/164 (54.88%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKT----LRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFII 521 I+N NRQVTFSKRR GL KKAREL ILCDA V +++ S T + +++ S++ K +++ YQ+ R+ S + + + Q + L RQ +GE +++ T+ +L L+ + L I KDQ+LA +I K VQKEN L+ F I Sbjct: 11 IDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF--SSSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKKFNI 172
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18 Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+ K +E+ S + TK L+ YQK ++ + E L A LK ++ R +GE L+ L ++EL LE+ + LK + + + L Q+ +RK + V + N+ L+ Sbjct: 11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTK-TLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 171
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18 Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+ K +E+ S + TK L+ YQK ++ + E L A LK ++ R +GE L+ L ++EL LE+ + LK + + + L Q+ +RK + V + N+ L+ Sbjct: 11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTK-TLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLR 171
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18 Identity = 55/166 (33.13%), Postives = 91/166 (54.82%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDL------------WSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503 IEN NRQVTFSKRR GL KKA E+++LCDA+V++++ S K EY S + +++L+ Y++ + WS Y ++ + +L++ R +GE L ++ +EL LEQ + LK I K+Q++ IN ++K + +Q++N L Sbjct: 11 IENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-STDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKI-------ELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSML 168
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18 Identity = 59/164 (35.98%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQ---------KTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN T+RQVTFSKRRNGL KKA EL++LCDA+V++++ S + +E+ S + + ++ +D Y+ KT++ D+ + + LG +++ L + R+ +GE+L ++EEL GLE + L I K ++L +QI K K R + K+N++L+ Sbjct: 11 IENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFAS-APSLQKTIDRYKAYTKDHVNNKTIQQDI----QQVKDDTLGLAKKL-EALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLR 168
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18 Identity = 55/160 (34.38%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTL-----RIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ S+ + +EY + S K ++ Y+K + ++ + + + Q ++K R MGESL LT+ +L GLE + G+ I K+++L +I ++K + N+ L+ Sbjct: 27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNS--VKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLR 184
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18 Identity = 54/166 (32.53%), Postives = 92/166 (55.42%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRID------------LWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503 IEN NRQVTFSKRR+GL KKA E+++LCDA+V +++ S+ K EY + S +++L+ Y++ + W+ + K+ L +L++ + +GE L L+++EL LE + LK I K+Q++ I+ ++K R +Q++N L Sbjct: 11 IENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS-CMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARL-------EVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQL 168 The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bpback to top |