CK932734

Overview
NameCK932734
Unique NameCK932734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18
Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK----------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IE   NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+  K +E+ S S+  K  L+ YQK          + R  L  S  ++ L+  G  E     L++  R  +GE L  L  +EL  LE+ +   LK I   + Q++  Q+  ++RK   + + N++L+
Sbjct:   11 IEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLK-TLERYQKCNYGAPEPNISTREALEISSQQEYLKLKGRYE----ALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLK 170          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.161e-18
Identity = 59/178 (33.15%), Postives = 98/178 (55.06%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLY------QKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYE 557
            IEN  NRQVTFSKRR+GL KKA E+++LCDA+V +++ S+  K  EY + S   ++LL+ Y      +K L     +S     LEN     ++  +L++  +  +GE L  L ++EL  LE  +   LK I   K+Q++   I+  +++ R +Q++N  L        KE +   +++
Sbjct:   11 IENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDS-CMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARL-EVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVEQQNQWD 186          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 60/163 (36.81%), Postives = 93/163 (57.06%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK----TLRID-----LWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+  K +E+ S S   K  LD YQK    ++ ++        + Y + L+  G  E     L++Q R  +GE L  L  +EL  LE+ +   LK +   K Q +  Q++  + K + + + N++L
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLK-TLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYEN----LQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRAL 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLR--------IDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ SS  + +EY + S   K  ++ Y+K            +  + +Y++    L A  Q+   L+ Q R  +GESL  L+L +L  LEQ I  G+  I   K+++L  +I   +++   +   N+ L+
Sbjct:   27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS--VKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRA--QIGN-LQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLR 184          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 59/182 (32.42%), Postives = 99/182 (54.40%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLR--------IDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELV 563
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ S+  + +EY + S   K  ++ Y+K            +  + +Y++    L A  Q+  ++  Q R  MGE+L  + L+EL  LEQ I  G+  I   K+++L  +I   +++   +   N+ L+       + +  H +  L+
Sbjct:   27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNS--VKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRA--QIGNLM-NQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQMNLM 203          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18
Identity = 55/162 (33.95%), Postives = 89/162 (54.94%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTL------RIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQD 509
            IEN  NRQVTFSKRRNGL KKA EL++LCDA+V+++I SS  K +E+   S    + L+ Y             L    ++   + +  ++     L++  R  +GE L  L+++EL  LE+ +   L    + K Q++  Q++  +RK R + + NK L++
Sbjct:   11 IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF--GSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKN 170          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 54/160 (33.75%), Postives = 97/160 (60.62%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGA----VEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQD 509
            IEN T+RQVTFSKRRNGL KKA EL++LCDA+V++++ S   K +E+ S S  T++ ++ Y+   + ++ +   ++ +E + A    + +    L+   R+ +GE L++ ++EEL  LE  +   L  I   K ++L  Q+   + K   ++K+N+ L++
Sbjct:   11 IENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASAS--TQKTIERYRTYTKENIGNKTVQQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREKEMKLRKDNEELRE 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 51/158 (32.28%), Postives = 90/158 (56.96%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQ---KTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDL-TLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IE+AT RQVTFSKRR G  KKA EL +LCDA+V +++ S   K  ++ SP     +L   Y+   +  R+   +   E+M+  +  +      L+  +R++ GE L+ + T++EL+ L+  +   L  +H  KD+++++Q+   +R  + V ++N  L
Sbjct:   11 IEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPVILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFL 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 60/165 (36.36%), Postives = 92/165 (55.76%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK----------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+  K +E+ S S+  K  L+ YQK          + R  L  S  ++ L+     E     L++  R  +GE L  L  +EL  LE+ +   LK I   + Q++  Q+   +RK   + + N++L+
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLK-TLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYE----ALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLK 170          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 54/166 (32.53%), Postives = 91/166 (54.82%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRID------------LWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN  NRQVTFSKRR+GL KKA E+++LCDA+V +++ S+  K  EY + S   ++LL+ Y++    +             W+  + K+   L        +L++  +  +GE L  L ++EL  LE  +   LK I   K+Q++   I+  +++ R +Q++N  L
Sbjct:   11 IENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS-CMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARL-------EVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQL 168          
The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
AGL9_SOLLC3.161e-1836.36Agamous-like MADS-box protein AGL9 homolog OS=Sola... [more]
AGL8_SOLCO3.161e-1833.15Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
SEP1_ARATH4.128e-1836.81Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
AG_TOBAC4.128e-1836.20Floral homeotic protein AGAMOUS OS=Nicotiana tabac... [more]
AG_SOLLC4.128e-1832.42Floral homeotic protein AGAMOUS OS=Solanum lycoper... [more]
MAD17_ORYSJ5.391e-1833.95MADS-box transcription factor 17 OS=Oryza sativa s... [more]
MAD50_ORYSJ7.041e-1833.75MADS-box transcription factor 50 OS=Oryza sativa s... [more]
MAD30_ORYSJ7.041e-1832.28MADS-box transcription factor 30 OS=Oryza sativa s... [more]
AGL9_PETHY7.041e-1836.36Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
AGL8_SOLTU7.041e-1832.53Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bp
GGGGGGGGAAAATGGGTAGAGGAAAGATGGAGATGAAGAGGATTGAGAAC
GCAACGAACAGGCAGGTGACATTCTCAAAGAGACGAAATGGGCTTTTCAA
GAAAGCTCGTGAACTCACCATTCTCTGTGATGCCAAGGTTTCCATTCTCA
TCTGTTCAAGCACTGCTAAGGCCCATGAATACATCAGCCCTTCCACTACA
ACAAAGCAATTGCTTGATTTGTATCAGAAGACTTTAAGAATCGATCTTTG
GAGCTCTCATTATGAGAAAATGCTAGAGAATCTGGGGGCTGTGGAACAAG
TGAATAGGATTCTGAAGAAGCAAATTAGGCAGAGGATGGGTGAAAGCTTG
AACGATCTGACCTTGGAGGAATTGACTGGTCTTGAGCAAGATATCCTTGA
TGGTTTAAAGATTATTCATGAATGCAAGGATCAGGTGCTCGCGAGACAGA
TTAATACTTTCAAGAGAAAGGTAAGGGGTGTGCAAAAAGAGAACAAAAGT
CTTCAGGATGGATTTATCATTAATGCTAAAGAGGAGGATCCGCACTATGA
GTATGAGTTAGTTGATAACGGTGAGCATTGTGATTCTGATTTTGGATTCC
AAAATGAAGGTCCTGGCATATTTGCTTTACGCTTGCAGCCTAACTAAGCC
TAAAGTACCCAGTGGACGAAGACTGAGTAGCATGTGAGATGACTTAGCAT
TATCAATACATTAAGTTACCAACACACTATAAGTATGAGAATTTGATGAA
GTGTTTTAAATATGGTAAGAATCACCTTGTTTTAGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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