CK932734

Overview
NameCK932734
Unique NameCK932734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_PETHY (Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.196e-18
Identity = 59/163 (36.20%), Postives = 92/163 (56.44%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLR--------IDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ SS  + +EY + S   K  ++ Y+K            +  + +Y++    L A  Q+   L+ Q R  +GESL  L L +L  LEQ I  G+  I   K+++L  +I   +++   +   N+ L+
Sbjct:   27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS--VKATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRA--QIGN-LQNQNRNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLR 184          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.569e-17
Identity = 55/159 (34.59%), Postives = 90/159 (56.60%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK----TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+V++++ S+  K +E+ S S   K  L+ YQ+    +L     S   E   +    ++    +L++  R  +GE L +L+ +EL  LE  +   L+ I   K Q +  Q+   ++K   + + N++L+
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNK-TLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALK 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQL---------LDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  +RQVTF+KRRNGL KKA EL++LCDA+V+++I S+  +  E+ + S   K L         L+  + +  ++   S+Y++ L+    VE     L+   R  +GE L  L+L+EL  LE  I   L  I   K+Q L  Q+   KRK + +Q  NK L+
Sbjct:   11 IENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVE----FLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLK 170          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 61/164 (37.20%), Postives = 91/164 (55.49%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQL---------LDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  +RQVTF+KRRNGL KKA EL++LCDA+V+++I S+  +  E+ + S   K L         L+  + +  ++   S+Y++ L+    VE     L+   R  +GE L  L+L+EL  LE  I   L  I   K+Q L  Q+   KRK + +Q  NK L+
Sbjct:   11 IENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVE----FLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLK 170          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 74/217 (34.10%), Postives = 108/217 (49.77%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPS--------TTTKQLLDLYQKTLRIDL------------WSSHYEKMLENL--GAVEQVNRILKK---QIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGF--IINAKEEDPHYEYELVDNGEHCDSDFGFQNEG 611
            IE+A  RQVTFSKRR GLFKKA EL +LCDA V++++ SST K  ++ S +        TT  + L    K   IDL             S  Y  +L  L       +N  L +   Q+RQ  GE L  L++EEL  +E+++  GL+ +   KDQ   ++I+  +RK   + +EN  L+D    +  A    P  E  L ++G+  +S     N G
Sbjct:   11 IESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPTAGLAVPDTENVLTEDGQSSESVMTALNSG 227          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 58/168 (34.52%), Postives = 92/168 (54.76%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLR--------IDLWSSHY-----EKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN T+RQVTF KRRNGL KKA EL ILCDA++++++ SS  + +E+ S   +T+  ++ Y+K           ID+ S  Y      KM   +  ++  NR L       +GES+ ++T +EL  LE  +  G+  I   K ++L  +I   +++   +Q EN  L+
Sbjct:   11 IENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEF-SNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHL-------IGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLR 170          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 56/164 (34.15%), Postives = 98/164 (59.76%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLR---------IDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN T+RQVTF KRRNGL KKA EL++LCDA+V++++ SS  + +EY S +   K  +D Y+K            I++ +  Y +  E+     Q+ ++L+   +  +G+++++L+L+EL  LE  +  G+  I   K+++LA +IN   ++   +Q +N  L+
Sbjct:   11 IENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQ-ESAKLRHQI-QMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLR 171          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17
Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPS---------TTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            I+++T+RQVTFSKRR GL KKA+EL ILCDA+V ++I S+T K +++ S S         T   +  +L      +  W    E + + L +       L++  RQ  G  LN L+++EL  +E  +   L+ I   ++Q+L  +I    RK   V  EN  L
Sbjct:   11 IDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHS-------LQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLEL 166          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17
Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTL---------RIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  +RQVTF+KRRNGL KKA EL+ILCDA+V++++ S   + +++ S S   K  L+ YQ+ +           D   ++Y++ +     VE    IL++  R  +GE L  L   EL  LE  ++  LK I   K QVL  ++   KRK + +Q  N+ L+
Sbjct:   11 IENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLK-TLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVE----ILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLK 169          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17
Identity = 48/154 (31.17%), Postives = 93/154 (60.39%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN ++RQVTFSKRRNGL +KAR+L++LCDA V++L+ S++ K + + S     K +LD Y K    DL +  ++    N G+  ++  ++  ++   +G ++ +++++ L  LE+ +   L +    K +++ + +   K K + +++EN+ L
Sbjct:   11 IENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVK-ILDRYGKQHADDLKALDHQSKALNYGSHYELLELVDSKL---VGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEKEKMLKEENQVL 160          
The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
AG_PETHY9.196e-1836.20Floral homeotic protein AGAMOUS OS=Petunia hybrida... [more]
CMB1_DIACA1.569e-1734.59MADS-box protein CMB1 OS=Dianthus caryophyllus GN=... [more]
MADS5_ORYSJ2.049e-1737.20MADS-box transcription factor 5 OS=Oryza sativa su... [more]
MADS5_ORYSI2.049e-1737.20MADS-box transcription factor 5 OS=Oryza sativa su... [more]
MAD55_ORYSJ2.049e-1734.10MADS-box transcription factor 55 OS=Oryza sativa s... [more]
MAD21_ORYSJ2.049e-1734.52MADS-box transcription factor 21 OS=Oryza sativa s... [more]
MAD13_ORYSJ2.049e-1734.15MADS-box transcription factor 13 OS=Oryza sativa s... [more]
AGL17_ARATH2.049e-1734.36Agamous-like MADS-box protein AGL17 OS=Arabidopsis... [more]
MAD34_ORYSJ2.676e-1736.59MADS-box transcription factor 34 OS=Oryza sativa s... [more]
FLC_ARATH2.676e-1731.17MADS-box protein FLOWERING LOCUS C OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bp
GGGGGGGGAAAATGGGTAGAGGAAAGATGGAGATGAAGAGGATTGAGAAC
GCAACGAACAGGCAGGTGACATTCTCAAAGAGACGAAATGGGCTTTTCAA
GAAAGCTCGTGAACTCACCATTCTCTGTGATGCCAAGGTTTCCATTCTCA
TCTGTTCAAGCACTGCTAAGGCCCATGAATACATCAGCCCTTCCACTACA
ACAAAGCAATTGCTTGATTTGTATCAGAAGACTTTAAGAATCGATCTTTG
GAGCTCTCATTATGAGAAAATGCTAGAGAATCTGGGGGCTGTGGAACAAG
TGAATAGGATTCTGAAGAAGCAAATTAGGCAGAGGATGGGTGAAAGCTTG
AACGATCTGACCTTGGAGGAATTGACTGGTCTTGAGCAAGATATCCTTGA
TGGTTTAAAGATTATTCATGAATGCAAGGATCAGGTGCTCGCGAGACAGA
TTAATACTTTCAAGAGAAAGGTAAGGGGTGTGCAAAAAGAGAACAAAAGT
CTTCAGGATGGATTTATCATTAATGCTAAAGAGGAGGATCCGCACTATGA
GTATGAGTTAGTTGATAACGGTGAGCATTGTGATTCTGATTTTGGATTCC
AAAATGAAGGTCCTGGCATATTTGCTTTACGCTTGCAGCCTAACTAAGCC
TAAAGTACCCAGTGGACGAAGACTGAGTAGCATGTGAGATGACTTAGCAT
TATCAATACATTAAGTTACCAACACACTATAAGTATGAGAATTTGATGAA
GTGTTTTAAATATGGTAAGAATCACCTTGTTTTAGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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