CK932734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWS----SHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN NRQVTFSKRRNGL KKA EL++LCDA+V+++I SS K +E+ S T + L+ YQ S S + + ++ L++ R +GE L L+++EL LE+ + L + K Q++ Q+ +RK R + + N+ L+ Sbjct: 11 IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGIT--KTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLK 167
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLY---QKTL------RIDLW---SSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKEN----KSLQDGFIINAKEEDPHYEYELV-DNGEHCDS 587 I+N RQVTFSKRR GLFKKA EL+ILCDA+V +++ S+T K ++ ST+ +Q++D Y KTL ++DL SS ++ E L ++RQ GE L+ L +E+L LE+ + GL + + K + + +I+ +RK + +EN + LQ + +E P + E+V + G+ +S Sbjct: 30 IDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQF--ASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAET-------SLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEMQPGPDSEIVYEEGQSSES 219
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 55/182 (30.22%), Postives = 94/182 (51.65%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDL-WSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIIN---------AKEEDPHYEYE 557 IEN T+RQVTFSKRR GL KK EL++LCDA++ ++I SS K EY S + Q++ Y +T L + ++ + + + + L+ +++ G+ L+ EEL LE+ + L I K +++ +Q+ K+ + ++KEN + + N ED H+ +E Sbjct: 14 IENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMNNQMYKQESAAMDHEDHHHHHE 195
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 52/159 (32.70%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK----TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN NRQVTF+KRRNGL KKA EL++LCDA++++LI S+ K +E+ S + + +D Y+K T+ + + + ++ ++ IL+ R +GE L+++ + EL LE+ + L+ I K + + Q++ K K + + N+ L+ Sbjct: 11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLR 169
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.785e-17 Identity = 53/160 (33.12%), Postives = 88/160 (55.00%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEY--ISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGF 515 IEN NRQVTFSKRRNGL KKA EL++LCDA+V+++I SS K +E+ + +T ++ Y +L + + + + ++ L + R +GE L ++ ++EL LE+ + L + K QV+ ++ ++K R + NK L+ F Sbjct: 11 IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKF 170
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16 Identity = 59/163 (36.20%), Postives = 91/163 (55.83%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK----TLRID-----LWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503 IEN NRQVTF+KRRNGL KKA EL++LCDA+VS+++ S+ K +E+ S S K L+ YQK ++ ++ + Y + L+ G E L++Q R +GE L L +EL LE+ + LK + K Q + Q++ + K + N++L Sbjct: 11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLK-TLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYEN----LQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRAL 168
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16 Identity = 61/179 (34.08%), Postives = 99/179 (55.31%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK--------------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ---DGFIINA 527 +EN NRQVTF+KRRNGL KKA EL++LCDA+V++++ S+ K +E+ S S+ K L+ YQK L ++L S ++ L+ E L++ R MGE L L+ ++L LE+ + LK I + Q + Q+ +RK + + N++L+ +G+ IN+ Sbjct: 11 VENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLK-TLERYQKCNYGAPEGNVTSKEALVLEL--SSQQEYLKLKARYES----LQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRMEGYQINS 182
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.328e-16 Identity = 65/184 (35.33%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQR--MGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELVDNGEHCDS 587 IEN +RQVTF+KRRNGL KKA EL++LCDA+V+++I S + E+ S S K L+ Y+ ++ E + ++ R+ Q QR +GE L L+++EL LE I LK I K+Q L Q+ K K + +Q NK L+ + E H ++ D G H S Sbjct: 11 IENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYK-TLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQ--DGGGHSGS 191
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.328e-16 Identity = 65/184 (35.33%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQR--MGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELVDNGEHCDS 587 IEN +RQVTF+KRRNGL KKA EL++LCDA+V+++I S + E+ S S K L+ Y+ ++ E + ++ R+ Q QR +GE L L+++EL LE I LK I K+Q L Q+ K K + +Q NK L+ + E H ++ D G H S Sbjct: 11 IENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYK-TLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQ--DGGGHSGS 191
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16 Identity = 58/166 (34.94%), Postives = 91/166 (54.82%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK-----------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+ K +E+ S + T+ L+ YQK +L S + L+ VE L++ R +GE L L ++EL LE+ + L+ I + Q + Q+ +R+ + + + NK L+ Sbjct: 11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTR-TLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVEN----LQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLR 171 The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bpback to top |