CK932734

Overview
NameCK932734
Unique NameCK932734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWS----SHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTFSKRRNGL KKA EL++LCDA+V+++I SS  K +E+ S   T  + L+ YQ        S    S  +     +  ++     L++  R  +GE L  L+++EL  LE+ +   L    + K Q++  Q+   +RK R + + N+ L+
Sbjct:   11 IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGIT--KTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLK 167          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLY---QKTL------RIDLW---SSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKEN----KSLQDGFIINAKEEDPHYEYELV-DNGEHCDS 587
            I+N   RQVTFSKRR GLFKKA EL+ILCDA+V +++ S+T K  ++   ST+ +Q++D Y    KTL      ++DL    SS   ++ E L            ++RQ  GE L+ L +E+L  LE+ +  GL  + + K + +  +I+  +RK   + +EN    + LQ   +   +E  P  + E+V + G+  +S
Sbjct:   30 IDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQF--ASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAET-------SLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEMQPGPDSEIVYEEGQSSES 219          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 55/182 (30.22%), Postives = 94/182 (51.65%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDL-WSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIIN---------AKEEDPHYEYE 557
            IEN T+RQVTFSKRR GL KK  EL++LCDA++ ++I SS  K  EY S   +  Q++  Y +T    L    +  ++ + +  + +    L+  +++  G+ L+    EEL  LE+ +   L  I   K +++ +Q+   K+  + ++KEN  +    + N            ED H+ +E
Sbjct:   14 IENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKENHDMYQWLMNNQMYKQESAAMDHEDHHHHHE 195          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17
Identity = 52/159 (32.70%), Postives = 91/159 (57.23%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK----TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTF+KRRNGL KKA EL++LCDA++++LI S+  K +E+ S  +   + +D Y+K    T+  +  +   +   ++   ++    IL+   R  +GE L+++ + EL  LE+ +   L+ I   K + +  Q++  K K   + + N+ L+
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLR 169          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.785e-17
Identity = 53/160 (33.12%), Postives = 88/160 (55.00%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEY--ISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGF 515
            IEN  NRQVTFSKRRNGL KKA EL++LCDA+V+++I SS  K +E+  +   +T ++    Y  +L  +      +   + +  ++     L +  R  +GE L ++ ++EL  LE+ +   L    + K QV+  ++   ++K R +   NK L+  F
Sbjct:   11 IENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKF 170          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16
Identity = 59/163 (36.20%), Postives = 91/163 (55.83%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK----TLRID-----LWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+VS+++ S+  K +E+ S S   K  L+ YQK    ++ ++        + Y + L+  G  E     L++Q R  +GE L  L  +EL  LE+ +   LK +   K Q +  Q++  + K   +   N++L
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLK-TLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYEN----LQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRAL 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16
Identity = 61/179 (34.08%), Postives = 99/179 (55.31%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK--------------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ---DGFIINA 527
            +EN  NRQVTF+KRRNGL KKA EL++LCDA+V++++ S+  K +E+ S S+  K  L+ YQK               L ++L  S  ++ L+     E     L++  R  MGE L  L+ ++L  LE+ +   LK I   + Q +  Q+   +RK   + + N++L+   +G+ IN+
Sbjct:   11 VENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLK-TLERYQKCNYGAPEGNVTSKEALVLEL--SSQQEYLKLKARYES----LQRSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRMEGYQINS 182          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.328e-16
Identity = 65/184 (35.33%), Postives = 95/184 (51.63%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQR--MGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELVDNGEHCDS 587
            IEN  +RQVTF+KRRNGL KKA EL++LCDA+V+++I S   +  E+ S S   K  L+ Y+        ++  E  +     ++   R+   Q  QR  +GE L  L+++EL  LE  I   LK I   K+Q L  Q+   K K + +Q  NK L+      + E   H  ++  D G H  S
Sbjct:   11 IENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYK-TLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQ--DGGGHSGS 191          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.328e-16
Identity = 65/184 (35.33%), Postives = 95/184 (51.63%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQR--MGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELVDNGEHCDS 587
            IEN  +RQVTF+KRRNGL KKA EL++LCDA+V+++I S   +  E+ S S   K  L+ Y+        ++  E  +     ++   R+   Q  QR  +GE L  L+++EL  LE  I   LK I   K+Q L  Q+   K K + +Q  NK L+      + E   H  ++  D G H  S
Sbjct:   11 IENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYK-TLERYRSCNYNSQDAAAPENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQ--DGGGHSGS 191          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16
Identity = 58/166 (34.94%), Postives = 91/166 (54.82%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK-----------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN  NRQVTF+KRRNGL KKA EL++LCDA+V+++I S+  K +E+ S  + T+  L+ YQK               +L  S   + L+    VE     L++  R  +GE L  L ++EL  LE+ +   L+ I   + Q +  Q+   +R+ + + + NK L+
Sbjct:   11 IENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTR-TLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVEN----LQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLR 171          
The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MADS6_ORYSJ4.564e-1735.85MADS-box transcription factor 6 OS=Oryza sativa su... [more]
MAD47_ORYSJ4.564e-1734.17MADS-box transcription factor 47 OS=Oryza sativa s... [more]
FBP24_PETHY4.564e-1730.22MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24... [more]
AGL3_ARATH4.564e-1732.70Agamous-like MADS-box protein AGL3 OS=Arabidopsis ... [more]
AGL6_ARATH7.785e-1733.13Agamous-like MADS-box protein AGL6 OS=Arabidopsis ... [more]
SEP2_ARATH1.017e-1636.20Developmental protein SEPALLATA 2 OS=Arabidopsis t... [more]
MTF1_PEA1.017e-1634.08MADS-box transcription factor 1 OS=Pisum sativum G... [more]
MADS1_ORYSJ1.328e-1635.33MADS-box transcription factor 1 OS=Oryza sativa su... [more]
MADS1_ORYSI1.328e-1635.33MADS-box transcription factor 1 OS=Oryza sativa su... [more]
MADS8_ORYSJ2.265e-1634.94MADS-box transcription factor 8 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bp
GGGGGGGGAAAATGGGTAGAGGAAAGATGGAGATGAAGAGGATTGAGAAC
GCAACGAACAGGCAGGTGACATTCTCAAAGAGACGAAATGGGCTTTTCAA
GAAAGCTCGTGAACTCACCATTCTCTGTGATGCCAAGGTTTCCATTCTCA
TCTGTTCAAGCACTGCTAAGGCCCATGAATACATCAGCCCTTCCACTACA
ACAAAGCAATTGCTTGATTTGTATCAGAAGACTTTAAGAATCGATCTTTG
GAGCTCTCATTATGAGAAAATGCTAGAGAATCTGGGGGCTGTGGAACAAG
TGAATAGGATTCTGAAGAAGCAAATTAGGCAGAGGATGGGTGAAAGCTTG
AACGATCTGACCTTGGAGGAATTGACTGGTCTTGAGCAAGATATCCTTGA
TGGTTTAAAGATTATTCATGAATGCAAGGATCAGGTGCTCGCGAGACAGA
TTAATACTTTCAAGAGAAAGGTAAGGGGTGTGCAAAAAGAGAACAAAAGT
CTTCAGGATGGATTTATCATTAATGCTAAAGAGGAGGATCCGCACTATGA
GTATGAGTTAGTTGATAACGGTGAGCATTGTGATTCTGATTTTGGATTCC
AAAATGAAGGTCCTGGCATATTTGCTTTACGCTTGCAGCCTAACTAAGCC
TAAAGTACCCAGTGGACGAAGACTGAGTAGCATGTGAGATGACTTAGCAT
TATCAATACATTAAGTTACCAACACACTATAAGTATGAGAATTTGATGAA
GTGTTTTAAATATGGTAAGAATCACCTTGTTTTAGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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