CK932734

Overview
NameCK932734
Unique NameCK932734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.958e-16
Identity = 53/162 (32.72%), Postives = 95/162 (58.64%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ SS  + +EY   + + K  ++ Y+K +  +  +    ++  N    +Q +  L++QI       RQ MGE++  ++ +EL  LE  +   +  I   K+++L  +I+  +++   +  +N+ L+
Sbjct:   27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNNSVKGTIERYKKAISDNSNTGSVAEI--NAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILR 184          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 53/162 (32.72%), Postives = 95/162 (58.64%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ SS  + +EY   + + K  ++ Y+K +  +  +    ++  N    +Q +  L++QI       RQ MGE++  ++ +EL  LE  +   +  I   K+++L  +I+  +++   +  +N+ L+
Sbjct:   27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNNSVKGTIERYKKAISDNSNTGSVAEI--NAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLR 184          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 55/185 (29.73%), Postives = 103/185 (55.68%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELVDNGE 575
            IEN+TNRQVTF KRRNGL KKA EL++LCDA+V++++ S+  + +EY   +   +  ++ Y+K       +S  +++  N    +Q +  L++QI       R  MG+SL+ L+++EL  +E  +   +  I   K ++L  +I   ++  R ++ +N+++     +   E    + +++V   E
Sbjct:   11 IENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY--ANNNIRSTIERYKKACSDSTNTSTVQEI--NAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQK--REIELDNENIYLRTKVAEVERYQQHHHQMVSGSE 189          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.046e-16
Identity = 52/167 (31.14%), Postives = 87/167 (52.10%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKT------------LRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V+++I S+  + +EY + S   +  ++ Y+K                  +     K+   +  ++ +NR +       +GESL  L  +EL  LE  +  G+  +   K ++L  +I   +++   +Q +N  L+
Sbjct:   26 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNS--VRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHI-------LGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLR 183          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.590e-16
Identity = 51/160 (31.87%), Postives = 88/160 (55.00%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLR-----IDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN TNRQVTF KRRNGL KKA EL++LCDA+V+++I S+  + +EY + S   +  ++ Y+K          +  ++ +   +    + +  R ++   R  +GESL  L  +EL  LE  +  G+  +   K+++L  +I   +++   +Q  N  L+
Sbjct:   26 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNS--VRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLR 183          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.607e-16
Identity = 55/161 (34.16%), Postives = 95/161 (59.01%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLY------QKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IENA +RQVTFSKRR GL KKA EL++LCDA+V++++ S + K  E+   ST+ K+ L  Y           I+  + + E+  E     ++++ + +K +  + G+ LN L+L+EL  LE+ +   L  + E K+ +L +Q+   + K +  + EN++L+
Sbjct:   11 IENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF--SSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQ-GKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETLR 168          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15
Identity = 52/163 (31.90%), Postives = 92/163 (56.44%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK--------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506
            IEN TNRQVTF KRR+GL KKA EL++LCDA+V++++ SS  + +EY   + + K+ ++ Y+K        +   ++ + HY+   +    ++Q    L+   R  +G+++  +   EL  LE  +  GL  I   K+++L  +I   +R+   +Q +N  L+
Sbjct:   53 IENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY--SNNSVKETIERYKKANSDTSNASTVAEINAQHYQ---QEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLK 210          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15
Identity = 50/151 (33.11%), Postives = 81/151 (53.64%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVN-------RILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKV 473
            IEN  +RQVTFSKRR GL KKA E+ +LCD  V+ ++ S+      Y S  TT +++L+ Y +   +   ++  E+  E  G++   +         LKK  R  MG+ L+ LTL+++  LE  I   L  I   K+++L  +    ++K+
Sbjct:   11 IENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKI 161          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15
Identity = 58/166 (34.94%), Postives = 92/166 (55.42%), Query Frame = 3
Query:   42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK--------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGF 515
            IEN  NRQVTF+KRR  L KKA EL++LCDA+V+++I S+  K +E+ S ST+  + L+ YQK        T+      S  ++ L+    VE     L++  R  +GE L  L  +EL  LE+ +   L+ I   + Q +  Q+   +R+ + + + NK+L+  F
Sbjct:   11 IENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-STSMLKTLEKYQKCNFGSPESTIISRETQSSQQEYLKLKNRVE----ALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRF 171          
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.287e-15
Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3
Query:   90 GLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRI------LKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503
            GL KKAREL ILCDA++ ++I SS+ K  E+ SP  + ++++D YQK       S +   + +N     ++ R+      L+  +R   GE L  LT+ E+  LEQ +   +  +   K+Q+L +Q++  +RK   ++++N+ L
Sbjct:    2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKL------SGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNREL 139          
The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
AG_ARATH2.958e-1632.72Floral homeotic protein AGAMOUS OS=Arabidopsis tha... [more]
AG_BRANA3.864e-1632.72Floral homeotic protein AGAMOUS OS=Brassica napus ... [more]
AGL11_ARATH3.864e-1629.73Agamous-like MADS-box protein AGL11 OS=Arabidopsis... [more]
AGL5_ARATH5.046e-1631.14Agamous-like MADS-box protein AGL5 OS=Arabidopsis ... [more]
AGL1_ARATH6.590e-1631.88Agamous-like MADS-box protein AGL1 OS=Arabidopsis ... [more]
AGL15_BRANA8.607e-1634.16Agamous-like MADS-box protein AGL15 OS=Brassica na... [more]
MAD58_ORYSJ1.124e-1531.90MADS-box transcription factor 58 OS=Oryza sativa s... [more]
MAD20_ORYSJ1.124e-1533.11MADS-box transcription factor 20 OS=Oryza sativa s... [more]
AGL9_ARADE1.918e-1534.94Agamous-like MADS-box protein AGL9 homolog OS=Aran... [more]
AP32_ASAEU7.287e-1531.94MADS-box protein AeAP3-2 (Fragment) OS=Asarum euro... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bp
GGGGGGGGAAAATGGGTAGAGGAAAGATGGAGATGAAGAGGATTGAGAAC
GCAACGAACAGGCAGGTGACATTCTCAAAGAGACGAAATGGGCTTTTCAA
GAAAGCTCGTGAACTCACCATTCTCTGTGATGCCAAGGTTTCCATTCTCA
TCTGTTCAAGCACTGCTAAGGCCCATGAATACATCAGCCCTTCCACTACA
ACAAAGCAATTGCTTGATTTGTATCAGAAGACTTTAAGAATCGATCTTTG
GAGCTCTCATTATGAGAAAATGCTAGAGAATCTGGGGGCTGTGGAACAAG
TGAATAGGATTCTGAAGAAGCAAATTAGGCAGAGGATGGGTGAAAGCTTG
AACGATCTGACCTTGGAGGAATTGACTGGTCTTGAGCAAGATATCCTTGA
TGGTTTAAAGATTATTCATGAATGCAAGGATCAGGTGCTCGCGAGACAGA
TTAATACTTTCAAGAGAAAGGTAAGGGGTGTGCAAAAAGAGAACAAAAGT
CTTCAGGATGGATTTATCATTAATGCTAAAGAGGAGGATCCGCACTATGA
GTATGAGTTAGTTGATAACGGTGAGCATTGTGATTCTGATTTTGGATTCC
AAAATGAAGGTCCTGGCATATTTGCTTTACGCTTGCAGCCTAACTAAGCC
TAAAGTACCCAGTGGACGAAGACTGAGTAGCATGTGAGATGACTTAGCAT
TATCAATACATTAAGTTACCAACACACTATAAGTATGAGAATTTGATGAA
GTGTTTTAAATATGGTAAGAATCACCTTGTTTTAGCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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