CK932734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.958e-16 Identity = 53/162 (32.72%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ SS + +EY + + K ++ Y+K + + + ++ N +Q + L++QI RQ MGE++ ++ +EL LE + + I K+++L +I+ +++ + +N+ L+ Sbjct: 27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNNSVKGTIERYKKAISDNSNTGSVAEI--NAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILR 184
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16 Identity = 53/162 (32.72%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN TNRQVTF KRRNGL KKA EL++LCDA+V++++ SS + +EY + + K ++ Y+K + + + ++ N +Q + L++QI RQ MGE++ ++ +EL LE + + I K+++L +I+ +++ + +N+ L+ Sbjct: 27 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--SNNSVKGTIERYKKAISDNSNTGSVAEI--NAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLR 184
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16 Identity = 55/185 (29.73%), Postives = 103/185 (55.68%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQI-------RQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELVDNGE 575 IEN+TNRQVTF KRRNGL KKA EL++LCDA+V++++ S+ + +EY + + ++ Y+K +S +++ N +Q + L++QI R MG+SL+ L+++EL +E + + I K ++L +I ++ R ++ +N+++ + E + +++V E Sbjct: 11 IENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY--ANNNIRSTIERYKKACSDSTNTSTVQEI--NAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQK--REIELDNENIYLRTKVAEVERYQQHHHQMVSGSE 189
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.046e-16 Identity = 52/167 (31.14%), Postives = 87/167 (52.10%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKT------------LRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN TNRQVTF KRRNGL KKA EL++LCDA+V+++I S+ + +EY + S + ++ Y+K + K+ + ++ +NR + +GESL L +EL LE + G+ + K ++L +I +++ +Q +N L+ Sbjct: 26 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNS--VRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHI-------LGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLR 183
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.590e-16 Identity = 51/160 (31.87%), Postives = 88/160 (55.00%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLR-----IDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN TNRQVTF KRRNGL KKA EL++LCDA+V+++I S+ + +EY + S + ++ Y+K + ++ + + + + R ++ R +GESL L +EL LE + G+ + K+++L +I +++ +Q N L+ Sbjct: 26 IENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNS--VRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLR 183
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.607e-16 Identity = 55/161 (34.16%), Postives = 95/161 (59.01%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLY------QKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IENA +RQVTFSKRR GL KKA EL++LCDA+V++++ S + K E+ ST+ K+ L Y I+ + + E+ E ++++ + +K + + G+ LN L+L+EL LE+ + L + E K+ +L +Q+ + K + + EN++L+ Sbjct: 11 IENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF--SSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQ-GKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETLR 168
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15 Identity = 52/163 (31.90%), Postives = 92/163 (56.44%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK--------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQ 506 IEN TNRQVTF KRR+GL KKA EL++LCDA+V++++ SS + +EY + + K+ ++ Y+K + ++ + HY+ + ++Q L+ R +G+++ + EL LE + GL I K+++L +I +R+ +Q +N L+ Sbjct: 53 IENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEY--SNNSVKETIERYKKANSDTSNASTVAEINAQHYQ---QEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLK 210
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.124e-15 Identity = 50/151 (33.11%), Postives = 81/151 (53.64%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVN-------RILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKV 473 IEN +RQVTFSKRR GL KKA E+ +LCD V+ ++ S+ Y S TT +++L+ Y + + ++ E+ E G++ + LKK R MG+ L+ LTL+++ LE I L I K+++L + ++K+ Sbjct: 11 IENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKKI 161
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.918e-15 Identity = 58/166 (34.94%), Postives = 92/166 (55.42%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQK--------TLRIDLWSSHYEKMLENLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGF 515 IEN NRQVTF+KRR L KKA EL++LCDA+V+++I S+ K +E+ S ST+ + L+ YQK T+ S ++ L+ VE L++ R +GE L L +EL LE+ + L+ I + Q + Q+ +R+ + + + NK+L+ F Sbjct: 11 IENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-STSMLKTLEKYQKCNFGSPESTIISRETQSSQQEYLKLKNRVE----ALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRF 171
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.287e-15 Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 90 GLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRI------LKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503 GL KKAREL ILCDA++ ++I SS+ K E+ SP + ++++D YQK S + + +N ++ R+ L+ +R GE L LT+ E+ LEQ + + + K+Q+L +Q++ +RK ++++N+ L Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKL------SGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNREL 139 The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bpback to top |