CK932734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 54/161 (33.54%), Postives = 93/161 (57.76%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTL---RIDLWSSHYEKMLE-NLGAVEQVNRILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKE-NKSLQD 509 IEN +RQVTF KRR GL KKAREL++LCDA V ++I SS K HE ++ + L++ YQ + +++ + +++ E + + + +L++ +R G ++TL++L LE+ + + I K Q++ ++I F R G+ KE N+ LQ+ Sbjct: 11 IENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHE-LATNGNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQ-FLRNKEGILKEANEMLQE 169
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.120e-14 Identity = 52/162 (32.10%), Postives = 92/162 (56.79%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKM--LENLGAVEQVNRILKKQIRQRMGESLND-LTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFI 518 IEN +RQVTF KRR GL KKAREL+ILC+A + I+I S+ K ++ ++ + T ++L++ Y+ + ++M + ++Q +L+K +R G N+ +T+EEL LE+ + + I K Q++ ++I K K ++ N+ LQ+ + Sbjct: 11 IENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYD-LATTGTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIV 171
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.120e-14 Identity = 52/162 (32.10%), Postives = 92/162 (56.79%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKM--LENLGAVEQVNRILKKQIRQRMGESLND-LTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFI 518 IEN +RQVTF KRR GL KKAREL+ILC+A + I+I S+ K ++ ++ + T ++L++ Y+ + ++M + ++Q +L+K +R G N+ +T+EEL LE+ + + I K Q++ ++I K K ++ N+ LQ+ + Sbjct: 11 IENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYD-LATTGTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIV 171
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.056e-14 Identity = 58/197 (29.44%), Postives = 104/197 (52.79%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRI------LKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSLQDGFIINAKEEDPHYEYELVDN---GEHCDSDFGFQN 605 IEN RQVTFSKR++GL KKA EL++LCDA+VS++I S+ K +E+ + + ++ Y + + +L + + + + G ++V ++ L + R +GE L ++++EL LE+ + L + K QV+ Q+ +RK R + N L+ + ++ D +L+ N C +DF Q+ Sbjct: 11 IENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF--SNVGVGRTIERYYR-CKDNLLDN--DTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLK----LETEDHDFKGFQDLLLNPVLTAGCSTDFSLQS 198
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.795e-13 Identity = 45/160 (28.12%), Postives = 90/160 (56.25%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSHYEKMLENLGAVEQVNRILKKQ-----IRQRMGES-LNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503 IEN ++RQVTFSKRRNGL +KAR+L+ILC++ +++L+ S + K ++ S +K ID + H+ LE L E+ L + ++ ++ ES +++ +++ L LE+ + L + K +++ ++ + ++ +++EN++L Sbjct: 11 IENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSK----------IIDRYEIHHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREENQTL 160
BLAST of CK932734 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.163e-12 Identity = 54/166 (32.53%), Postives = 86/166 (51.81%), Query Frame = 3 Query: 42 IENATNRQVTFSKRRNGLFKKARELTILCDAKVSILICSSTAKAHEYISPSTTTKQLLDLYQKTLRIDLWSSH----YEKMLE--NLGAVEQVN------RILKKQIRQRMGESLNDLTLEELTGLEQDILDGLKIIHECKDQVLARQINTFKRKVRGVQKENKSL 503 IEN +RQVTF KRR GL KKA+EL++LCDA++ ++I S K E ++ T + ++D Y K SS ++ L+ NL +++N +L+K I G + LEEL LE+ + + I K V+ ++I + + K ++ NK L Sbjct: 11 IENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFE-LATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYL 175 The following BLAST results are available for this feature:
BLAST of CK932734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932734 ID=CK932734; Name=CK932734; organism=Citrus sinensis; type=EST; length=815bpback to top |