CK932736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1_RAT (Proteasome subunit beta type-1 OS=Rattus norvegicus GN=Psmb1 PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15 Identity = 58/216 (26.85%), Postives = 98/216 (45.37%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEP-----------------DELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 706 +NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G+ + +D AG G+ AM +P ++ D V +S+ +RD +G + IVT I+E + R D Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDPVGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1B_CARAU (Proteasome subunit beta type-1-B OS=Carassius auratus GN=psmb1-B PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.289e-15 Identity = 53/209 (25.36%), Postives = 101/209 (48.33%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESL----------YGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 706 +NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D +G+ + +D AG + ++ + E + + + ++ + V +S+ +RD +G + I+T I+E I+ R D Sbjct: 31 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQ--RDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 237
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1A_CARAU (Proteasome subunit beta type-1-A OS=Carassius auratus GN=psmb1-A PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.289e-15 Identity = 53/209 (25.36%), Postives = 101/209 (48.33%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESL----------YGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 706 +NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D +G+ + +D AG + ++ + E + + + ++ + V +S+ +RD +G + I+T I+E I+ R D Sbjct: 32 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQ--RDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1_BOVIN (Proteasome subunit beta type-1 OS=Bos taurus GN=PSMB1 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.699e-15 Identity = 58/216 (26.85%), Postives = 96/216 (44.44%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKP-----------------DMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 706 +NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G+ + +D AG G+ AM +P + D V +S+ +RD +G V IVT I+ + R D Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQ--RDSFKAG-------GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIRGETVPLRKD 241
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1_ORYSJ (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica GN=PBF1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.136e-14 Identity = 55/213 (25.82%), Postives = 89/213 (41.78%), Query Frame = 2 Query: 107 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFK-------------PDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 706 E NG VA+ G + +A+D RL V + D +I ++ D+ + SG D + L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T D++G+ E + GT + + K + E + V S+ +RD +G + ++ K + R D Sbjct: 10 ENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYE-RTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1_ARATH (Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14 Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = 2 Query: 113 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 484 NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L + L R +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D++G+ E Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYE 137
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1_DROME (Proteasome subunit beta type-1 OS=Drosophila melanogaster GN=Pros26 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13 Identity = 55/211 (26.07%), Postives = 94/211 (44.55%), Query Frame = 2 Query: 107 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMF-----------KPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKGRMD 706 E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L + R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D IG E A + GTAG L + K + + S +S+ +RD +G + I+T I+ R L R D Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKA-TYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13 Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 2 Query: 116 GSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 673 G+ V + K+ A++RR +G + ATD +I KI + + ++G D+Q+L + L LY++R + E A+L + +L+ RF P+ Q ++ G+ DE+ I ++D G + FV G+ YG E + ++ DE + +A+ S+++RD SG G V VT E Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATD--KIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGV-DENGAKIYSLDPSGGM-IPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTEEE 192
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1_SCHPO (Probable proteasome subunit beta type-1 OS=Schizosaccharomyces pombe GN=pam1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13 Identity = 47/125 (37.60%), Postives = 64/125 (51.20%), Query Frame = 2 Query: 113 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 484 NG VA+ G +A D R V I T FQ R+ ++ D L IG SG D+ L +R+ R LY ER M ++ A +V LLY KRF PY+ +AG+ E K I + D +G+ E Sbjct: 12 NGGTTVAIAGDGFAILAGDTR-SVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDPVGSYE 135
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB1_PETHY (Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13 Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 2 Query: 113 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 484 NG VA+ G + IA+D R+ + D+ +I K+ D+ + SG D + L + L R +YQ + + M L+S LY KRF PY+ V+ GL E K + T D++G+ E Sbjct: 14 NGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYE 137 The following BLAST results are available for this feature:
BLAST of CK932736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932736 ID=CK932736; Name=CK932736; organism=Citrus sinensis; type=EST; length=771bpback to top |