CK932736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB9_MUSMB (Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 48/198 (24.24%), Postives = 95/198 (47.98%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE--IKERILKG 697 + G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q + ++ +L+ L E A++V + Y+ R ++AG + + ++G + + F ++G+ +YG +A +KP M P+E + A+ +++RD S GG +Y+VT T + R++ G Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSS--GGVIYLVTITAAGVDHRVILG 210
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB9_MUSSI (Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 48/198 (24.24%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE--IKERILKG 697 + G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q + ++ +L+ L E A++V + Y+ R ++AG + + ++G + + F + G+ +YG +A +KP M P+E + A+ +++RD S GG +Y+VT T + R++ G Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSS--GGVIYLVTITAAGVDHRVILG 210
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB9_MUSDU (Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 48/198 (24.24%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE--IKERILKG 697 + G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q + ++ +L+ L E A++V + Y+ R ++AG + + ++G + + F + G+ +YG +A +KP M P+E + A+ +++RD S GG +Y+VT T + R++ G Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSS--GGVIYLVTITAAGVDHRVILG 210
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB9_MOUSE (Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 48/198 (24.24%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE--IKERILKG 697 + G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q + ++ +L+ L E A++V + Y+ R ++AG + + ++G + + F + G+ +YG +A +KP M P+E + A+ +++RD S GG +Y+VT T + R++ G Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSS--GGVIYLVTITAAGVDHRVILG 210
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 44/195 (22.56%), Postives = 96/195 (49.23%), Query Frame = 2 Query: 116 GSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKG 697 G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + + F+ + ++ E + AS++ L Y + + AG + P + T+ ++G L++ F + G+ +YG +A +KPDM +E + + AL ++ RD +SG H+ ++T ++ ++ G Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEEGVEHVVIPG 208
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.369e-12 Identity = 44/195 (22.56%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 116 GSALVAMVGKNCFAIASDRRLGVQLQTIATD-FQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTEIKERILKG 697 G+ ++A+ I SD R + +++ ++ ++HDR+F ++G D+Q + + F+ + ++ E + AS++ L Y + + AG + P + T+ ++G L++ F + G+ +YG +A +KPDM +E + AL ++ RD +SG H+ ++T ++ ++ G Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGVAHLVVITEEGVEHVVIPG 208
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12 Identity = 47/198 (23.74%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE--IKERILKG 697 + G+ ++A+ + SD R+ + F ++S +H R++ LSG A D+Q + ++ +L+ L E A++V + Y+ R ++AG + + ++G + + F + G+ +YG +A +KP M P+E + A+ +++RD S GG +Y+VT T + R++ G Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYR-EDLLAHLMVAGWDQHEGGQV--YGTMGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSS--GGVIYLVTITADGVDHRVILG 210
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSB9_MUSPL (Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11 Identity = 47/198 (23.74%), Postives = 93/198 (46.97%), Query Frame = 2 Query: 110 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPT--EIKERILKG 697 + G+ ++A+ + SD R+ + F ++S +H R+F LSG A D+Q + ++ +L+ L E A++V + Y+ R ++AG + + ++G + + F + G+ +YG +A +KP M +E + A+ +++RD S GG +Y+VT T + R++ G Sbjct: 18 HTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSS--GGVIYLVTITVAGVDHRVILG 210
BLAST of CK932736 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.468e-11 Identity = 51/189 (26.98%), Postives = 94/189 (49.74%), Query Frame = 2 Query: 107 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRRKLYQLREERDMKPETXASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVAGTAGESLYGACEAMFKPDMEPDELFETVSQALLSSVDRDCLSGWGGHVYIVTPTE 673 ++ G+ V +V + +A+DRR + A + +I KI + L I +G D L + L KLY + + M + A+L++ +L R PY ++ G ++KP + ++D +G K +V AG+ E Y ++ ++ D++ E + +A+ S++ RD SG G + +VT TE Sbjct: 7 KFKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGF--DEKPRLYSVDMMGGITEDK-YVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDG--IMVVTITE 190 The following BLAST results are available for this feature:
BLAST of CK932736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932736 ID=CK932736; Name=CK932736; organism=Citrus sinensis; type=EST; length=771bpback to top |