CK932738

Overview
NameCK932738
Unique NameCK932738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_MACFA (40S ribosomal protein S11 OS=Macaca fascicularis GN=RPS11 PE=2 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 4.768e-47
Identity = 91/154 (59.09%), Postives = 113/154 (73.38%), Query Frame = 2
Query:  104 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 562
            QTE+A+ KQP +F +               R++K+IGLGFKTP+EA+EGTYIDKKCPFTG VSIRGRIL+G     KM RTI++RR+YLH+++KY R+EKRH N+  H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV  A    G KK F
Sbjct:    5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_HUMAN (40S ribosomal protein S11 OS=Homo sapiens GN=RPS11 PE=1 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 4.768e-47
Identity = 91/154 (59.09%), Postives = 113/154 (73.38%), Query Frame = 2
Query:  104 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 562
            QTE+A+ KQP +F +               R++K+IGLGFKTP+EA+EGTYIDKKCPFTG VSIRGRIL+G     KM RTI++RR+YLH+++KY R+EKRH N+  H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV  A    G KK F
Sbjct:    5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_BOVIN (40S ribosomal protein S11 OS=Bos taurus GN=RPS11 PE=2 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 4.768e-47
Identity = 91/154 (59.09%), Postives = 113/154 (73.38%), Query Frame = 2
Query:  104 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 562
            QTE+A+ KQP +F +               R++K+IGLGFKTP+EA+EGTYIDKKCPFTG VSIRGRIL+G     KM RTI++RR+YLH+++KY R+EKRH N+  H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV  A    G KK F
Sbjct:    5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_DICDI (40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.091e-46
Identity = 93/153 (60.78%), Postives = 111/153 (72.55%), Query Frame = 2
Query:  104 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 562
            Q EKAF KQ   F +               R++K+IGLG++TP++A+EGTYIDKKCPFT  VSIRG IL GT  S KM RT++VRRNYLH++KKY R+EKRHSNIPAH+SP F VKEGD V IGQCRPLSKTVRFNV+K   + +S    KAF
Sbjct:    5 QAEKAFQKQQVSFKNRFQLKASKGKEGI--RYYKNIGLGYRTPKDAIEGTYIDKKCPFTSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAFNVKEGDSVTIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_YEAST (40S ribosomal protein S11 OS=Saccharomyces cerevisiae GN=RPS11A PE=1 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 2.003e-45
Identity = 88/153 (57.52%), Postives = 113/153 (73.86%), Query Frame = 2
Query:  104 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 562
            Q+E+AF KQP +F +               R++K+ GLGFKTP+ A+EG+YIDKKCPFTG VSIRG+IL GT  S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD V +GQCRP+SKTVRFNV+KV  + ++G A K F
Sbjct:    8 QSERAFQKQPHIFNNPKVKTSKRT-----KRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_SCHPO (40S ribosomal protein S11 OS=Schizosaccharomyces pombe GN=rps11a PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.003e-45
Identity = 86/141 (60.99%), Postives = 105/141 (74.47%), Query Frame = 2
Query:  104 QTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 526
            Q+E+AF KQP +F ++              R++K +GLGFKTP EA+ G Y+DKKCPF G VSIRGRIL GT  S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ EGD V +GQCRPLSKTVRFNVL+V+
Sbjct:    8 QSERAFQKQPHIFQNAKKGAG--------RRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 140          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_DROPS (40S ribosomal protein S11 OS=Drosophila pseudoobscura pseudoobscura GN=RpS11 PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.073e-42
Identity = 91/157 (57.96%), Postives = 109/157 (69.43%), Query Frame = 2
Query:   95 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 562
            MA+Q E+AF KQ  V L+               R ++ +GLGFKTPREA++GTYIDKKCP+TG V IRGRIL G     KM RTI++RR+YLHFV+KY R+EKRH N+  H SP FR V+ GD V IG+CRPLSKTVRFNVLKV       GAKK+F
Sbjct:    1 MADQNERAFQKQFGVNLNRKVKPGVTKKKIL--RRYRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIVTIGECRPLSKTVRFNVLKV---NKGQGAKKSF 152          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_DROYA (40S ribosomal protein S11 OS=Drosophila yakuba GN=RpS11 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.708e-42
Identity = 92/157 (58.60%), Postives = 109/157 (69.43%), Query Frame = 2
Query:   95 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 562
            MA+Q E+AF KQ  V L+               R  + +GLGFKTPREA++GTYIDKKCP+TG V IRGRIL G    AKM RTI++RR+YLHFV+KY R+EKRH N+  H SP FR V+ GD V IG+CRPLSKTVRFNVLKV       GAKK+F
Sbjct:    1 MADQNERAFQKQFGVNLNRKVKPGITKKKLL--RRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_DROME (40S ribosomal protein S11 OS=Drosophila melanogaster GN=RpS11 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.708e-42
Identity = 92/157 (58.60%), Postives = 109/157 (69.43%), Query Frame = 2
Query:   95 MAEQTEKAFLKQPKVFLSSXXXXXXXXXXXXXNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 562
            MA+Q E+AF KQ  V L+               R  + +GLGFKTPREA++GTYIDKKCP+TG V IRGRIL G    AKM RTI++RR+YLHFV+KY R+EKRH N+  H SP FR V+ GD V IG+CRPLSKTVRFNVLKV       GAKK+F
Sbjct:    1 MADQNERAFQKQFGVNLNRKVKPGITKKKLL--RRSRDVGLGFKTPREAIDGTYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV---SKGQGAKKSF 152          
BLAST of CK932738 vs. ExPASy Swiss-Prot
Match: RS11_ANOGA (40S ribosomal protein S11 OS=Anopheles gambiae GN=RpS11 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.878e-42
Identity = 81/125 (64.80%), Postives = 98/125 (78.40%), Query Frame = 2
Query:  194 RFWKSIGLGFKTPREAVEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFT 565
            R   SIGLGFKTP+EA+ GTYIDKKCPFTG +SIRGRIL G     KM+RTI++RR+YLHF++KY R+EKRH N+  H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV       G+KK F+
Sbjct:   30 RMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDIVTVGECRPLSKTVRFNVLKV---SKMAGSKKKFS 151          
The following BLAST results are available for this feature:
BLAST of CK932738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
RS11_MACFA4.768e-4759.0940S ribosomal protein S11 OS=Macaca fascicularis G... [more]
RS11_HUMAN4.768e-4759.0940S ribosomal protein S11 OS=Homo sapiens GN=RPS11... [more]
RS11_BOVIN4.768e-4759.0940S ribosomal protein S11 OS=Bos taurus GN=RPS11 P... [more]
RS11_DICDI3.091e-4660.7840S ribosomal protein S11 OS=Dictyostelium discoid... [more]
RS11_YEAST2.003e-4557.5240S ribosomal protein S11 OS=Saccharomyces cerevis... [more]
RS11_SCHPO2.003e-4560.9940S ribosomal protein S11 OS=Schizosaccharomyces p... [more]
RS11_DROPS2.073e-4257.9640S ribosomal protein S11 OS=Drosophila pseudoobsc... [more]
RS11_DROYA2.708e-4258.6040S ribosomal protein S11 OS=Drosophila yakuba GN=... [more]
RS11_DROME2.708e-4258.6040S ribosomal protein S11 OS=Drosophila melanogast... [more]
RS11_ANOGA7.878e-4264.8040S ribosomal protein S11 OS=Anopheles gambiae GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_B08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932738 ID=CK932738; Name=CK932738; organism=Citrus sinensis; type=EST; length=746bp
GGGGCCGCGCTTGATTTAGGGTTTTCTGCATTGTGTTAGCCACCTCCGCC
CAGTGCGTTCATCATCCTCAACAACTCAGCCCCGAAATCCAGCCATGGCG
GAGCAGACCGAGAAGGCGTTTTTGAAGCAGCCCAAGGTGTTTCTCAGCTC
GAAGAAGGCAGGAAAAGGAAAGAGGCCAGGAAAGGGAGGGAATCGATTCT
GGAAGAGCATAGGCTTGGGATTCAAGACTCCCAGAGAGGCAGTTGAAGGG
ACTTACATCGATAAGAAGTGTCCGTTCACCGGCACTGTTTCCATCAGGGG
TCGTATCCTTGCTGGTACTTGCCACAGTGCTAAGATGAACAGAACCATCA
TCGTTAGGCGTAACTACCTTCACTTTGTGAAGAAATATCAGAGGTATGAG
AAGAGGCACTCTAACATTCCAGCACACATCTCACCTTGTTTCCGTGTGAA
AGAGGGAGACCATGTTATCATTGGCCAGTGCAGGCCTTTGTCAAAGACGG
TCAGGTTTAATGTCTTGAAAGTGATACCTGCTGGGTCTTCTGGTGGTGCA
AAGAAGGCATTCACGGCGATGTGAGTTGGAGTCCGCTGTTTCCAACATTA
AATTTTTGCTACTTTTGTTCCATGGGACTTTGTTATTTGGATTTTTGCAT
TGGGAATTAAATCCTTTTATGTCCTAATATATATTTTCTAGAGAAGTTAA
TTTTTCCTTTTGCTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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