CK932786

Overview
NameCK932786
Unique NameCK932786
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: YSNF1_PLAF7 (Uncharacterized protein PF14_0397 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0397 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.661e-14
Identity = 40/126 (31.75%), Postives = 76/126 (60.32%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGME--DEAGVPSYLQPDKEPD 372
            +K++YE  ++      FN+DQ+ +A++ ++ +  T  ALK+ +K LK  +K V I  I+ LQD++ D ++ + EI   L  SY++P ++DE E+  EL  +E  +  E  ++  + SY++ DK+ +
Sbjct:   64 KKKVYENNKESTMGIQFNIDQIKYANDNVQLSIDTYKALKNTSKVLKKNIKKVNINKIEKLQDDLFDYIEDTKEIGNILSSSYDIPLNLDEQEIDAELALIEDSILDENVEQDNIASYIEDDKKEE 189          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: SNF7_KLULA (Vacuolar-sorting protein SNF7 OS=Kluyveromyces lactis GN=SNF7 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.398e-13
Identity = 46/160 (28.75%), Postives = 85/160 (53.12%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEADMGMEDEAGVPSYLQPDKEPDL------DAELNLPTAPSGHASAQHDRPQAEDELGL 462
            +K++YE Q D L +Q  +LDQ  ++ E      +T+ A+K     +K + K + +  +D+  DE+ + ++++ EI E + +   + D++DEDEL  EL+ LE++  ++ E   P   Q  ++P +      D +L+ P   S  A  + D  + EDE  L
Sbjct:   66 KKKLYESQLDKLQSQIDSLDQQLYSIENANLNLETLKAMKQGASAMKNIHKGLDLDKVDDTMDEIREQVELNQEISEAISKPLILQDELDEDELDQELELLESE-NLQKEHIAPVPQQQIQQPSIDLPSVPDVKLSTPELNSAQAD-EEDEEEDEDERAL 223          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: VP322_ARATH (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.651e-12
Identity = 38/104 (36.54%), Postives = 53/104 (50.96%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALEAD 312
            +KR+YEGQ + L N    +       EG K   +T+ AL+S    +K M K   I D+D   DE+ +  +   +IQE L        D DEDEL  ELD LE++
Sbjct:   65 RKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESE 168          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: VPS60_YEAST (Vacuolar protein-sorting-associated protein 60 OS=Saccharomyces cerevisiae GN=VPS60 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 46/144 (31.94%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVP--DDIDEDELMGELDAL-EADMGM---EDEAG--VPSYLQP--------DKEPDLDAE 384
            +++  E  +D L +Q++++ Q    ++ +++   T+ ALK  N  +K     + I  + ++QDEM+DL++   E+QE L  + N    DDI + EL  ELDAL + D  +   E+  G  +PSYL          D+EP+LD E
Sbjct:   76 KRKQLENMKDSLDSQSWSMTQAQLTNDNLQNTMITINALKQTNNAMKAQYGKINIDKLQDMQDEMLDLIEQGDELQEVLAMNNNSGELDDISDAELDAELDALAQEDFTLPTSENSLGNDMPSYLLGANAPPAFIDEEPNLDTE 219          
BLAST of CK932786 vs. ExPASy Swiss-Prot
Match: VP321_ARATH (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana GN=VPS32.1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11
Identity = 44/142 (30.99%), Postives = 67/142 (47.18%), Query Frame = 1
Query:    1 QKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMMKTVKIQDIDNLQDEMMDLMDVSHEIQETLGRSYNVPDDIDEDELMGELDALE-ADMGMEDEAGVPSYLQPDKEPDLDAELNLPTAPSGHASA 423
            +KR+YE Q + L N    +       EG K   +T+ AL++    +K M K   I D+D   DE+ +  +   +IQE L   +   +D DEDEL  ELD LE A++  +    VP ++    +P        PTA     +A
Sbjct:   66 RKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSAPFGA-NDFDEDELEAELDELEGAELEEQLLQPVPIHVPQGNKPARAPAQKQPTAEEDELAA 206          
The following BLAST results are available for this feature:
BLAST of CK932786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
YSNF1_PLAF71.661e-1431.75Uncharacterized protein PF14_0397 OS=Plasmodium fa... [more]
SNF7_KLULA2.398e-1328.75Vacuolar-sorting protein SNF7 OS=Kluyveromyces lac... [more]
VP322_ARATH2.651e-1236.54Vacuolar protein sorting-associated protein 32 hom... [more]
VPS60_YEAST4.522e-1231.94Vacuolar protein-sorting-associated protein 60 OS=... [more]
VP321_ARATH6.530e-1130.99Vacuolar protein sorting-associated protein 32 hom... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_D03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932786 ID=CK932786; Name=CK932786; organism=Citrus sinensis; type=EST; length=611bp
CAAAAGCGAATGTATGAAGGTCAGCGTGATATGCTTTACAATCAGACATT
CAACCTTGATCAAGTTGCATTTGCTTCGGAGGGTATTAAAGATGCACAAC
AAACTATGACAGCTTTGAAAAGCGCCAACAAGGAGTTGAAGGGAATGATG
AAAACCGTGAAGATTCAAGACATAGATAACTTGCAAGATGAGATGATGGA
CCTGATGGATGTGAGCCATGAAATTCAAGAGACGCTTGGTAGAAGTTATA
ATGTTCCTGATGACATTGACGAGGACGAACTCATGGGTGAACTTGATGCT
CTGGAAGCAGACATGGGAATGGAAGATGAAGCCGGAGTTCCCTCTTATCT
TCAACCCGACAAGGAACCTGATTTGGATGCAGAGCTCAACTTGCCTACAG
CACCTAGTGGTCATGCATCAGCACAGCATGACAGACCACAGGCTGAGGAT
GAACTGGGTTTACCTTCTGTCCCTCAGGCGTCCATCCGTGGTTAGGGATT
TACTGGCTGTGTCTATGCGTGTGTGCATCAGGCAGAATCAGATGGAGCTT
GTCATTGTATACTGATTGTGCAGAAACCGCTTTTATTCATGTAGTTATTC
AATTGATACTG
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