CK932856

Overview
NameCK932856
Unique NameCK932856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK932856 vs. ExPASy Swiss-Prot
Match: H3L2_LILLO (Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12
Identity = 46/86 (53.49%), Postives = 51/86 (59.30%), Query Frame = 3 
Query:   78 MARTKQTARKSTGGKAPRKQLATKAARES-APATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 332
            MAR K TAR STGGKAPRKQLA+KA R++  P T GVK+P     G                  RKLPFQ LVR+I QD KT LRF
Sbjct:    1 MARMKHTARMSTGGKAPRKQLASKALRKAPPPPTKGVKQPTTTTSGKWRFARFH----------RKLPFQGLVRKIWQDLKTHLRF 76
The following BLAST results are available for this feature:
BLAST of CK932856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H3L2_LILLO1.526e-1253.49Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004350_F12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932856 ID=CK932856; Name=CK932856; organism=Citrus sinensis; type=EST; length=698bp
GGGGCTCGCCATCTTTCAATTTTCATTCATATTTTAAGATCTCCCAAGAA
AAAAGAAACACTTAATTTCCCAAATCAATGGCCCGCACGAAGCAAACCGC
TCGCAAGTCCACCGGAGGCAAGGCCCCAAGAAAGCAACTGGCGACCAAGG
CGGCAAGGGAATCCGCACCGGCAACCGGAGGAGTGAAGAAGCCTCACAGG
TTCCGTCCAGGAACTGTCGCACTCCGTGAAATCAGGAAGTACCAGAAGAG
CACTGAGCTTCTTATTAGGAAGCTTCCGTTCCAGAGATTGGTGAGGGAAA
TCGCTCAGGATTTCAAGACGGATCTGAGGTTCCAGAGCAGCGCTGTTGCT
GCACTTCAGGAGGCTGCTGAGGCTTATCTTGTTGGGCTGTTCGAGGACAC
CAACCTCTGCGCTATTCATGCTAAGAGGGTCACTATTATGCCCAAGGACA
TTCAGCTTGCTAGGCGGATCAGGGGTGAAAGGGCTTAGGAACTTTCTGAT
TTAATTTATTTTGTTCCTCTTACTGCGATGTTAGTCTTTCGGTCAATATT
TGGGGTTTAGATGAATGTTTGGATGTCTATCCGATGGATTAGATCGGGTC
TAGTATGTATCTAAGGTGTTTGTTAAAATGTTTTCGAGGGTTTTTAATCT
AATAGATAATTAGCCTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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