CK932859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_ANAVT (Glycine dehydrogenase [decarboxylating] OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gcvP PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.575e-49 Identity = 88/140 (62.86%), Postives = 108/140 (77.14%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + DLR LK +A IE +D+AKRL+DYGFH PT+SWPV GT+++EPTESES+ ELDR+CDALI+IR+EIA IE GK D HNN+LK APH L+ W PYSRE AAYP SW R KFWP+ GR+D +GDRN +C+ LP Sbjct: 830 ILDLRALKKSANIEIDDIAKRLIDYGFHAPTVSWPVTGTIMVEPTESESQAELDRFCDALIAIRQEIAAIEAGKMDTHNNLLKNAPHTIESLIVGEWLHPYSREQAAYPVSWTREYKFWPSVGRIDAAFGDRNFVCSCLP 969
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_ANASP (Glycine dehydrogenase [decarboxylating] OS=Anabaena sp. (strain PCC 7120) GN=gcvP PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.065e-48 Identity = 86/140 (61.43%), Postives = 107/140 (76.43%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + DLR LK +A IE +D+AKRL+DYGFH PT+SWPV GT+++EPTESES+ ELDR+C+ALI+IR+EIA IE GK DI +N LK APH L+ W PYSRE AAYPA W R KFWP+ GR+D +GDRN +C+ LP Sbjct: 839 ILDLRALKKSANIEIDDIAKRLIDYGFHAPTVSWPVAGTIMVEPTESESQAELDRFCEALIAIRQEIADIEAGKVDIQDNSLKNAPHTVESLIVGEWPHPYSREQAAYPAPWTREHKFWPSVGRIDAAFGDRNFVCSCLP 978
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIN (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans GN=gcvP PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48 Identity = 88/140 (62.86%), Postives = 108/140 (77.14%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + DLR K +AGIE EDVAKRL+DYGFH PTMS+PVPGTL+IEPTESES EELDR+C+A++ I +EI ++NG D +N LK +PH +++ D W Y RE AAYPASWL+ KFWP GRVDNVYGDRNL+C+ LP Sbjct: 820 ILDLRPFKKSAGIEVEDVAKRLIDYGFHAPTMSFPVPGTLMIEPTESESLEELDRFCEAMLLIYQEILDVQNGTLDKTDNPLKNSPHTAAMVTSDRWDHLYPRERAAYPASWLKDHKFWPYVGRVDNVYGDRNLVCSCLP 959
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_BDEBA (Glycine dehydrogenase [decarboxylating] OS=Bdellovibrio bacteriovorus GN=gcvP PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.474e-47 Identity = 86/137 (62.77%), Postives = 105/137 (76.64%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICT 421 + D+R +K T+GI+ DVAKRLMD+GFH PTMS+PV GTL+IEPTESESK+ELDR+ +++++IR+EIA +E GK D NN LK APH +LM W PYSRE A YP WLR KFWP GRVDN YGDRNLIC+ Sbjct: 813 IVDVREIKKTSGIDVTDVAKRLMDFGFHAPTMSFPVAGTLMIEPTESESKKELDRFIESMVTIRKEIAAVETGKMDKENNALKNAPHTAQMLMKPEWNHPYSREEAVYPVEWLRGNKFWPVVGRVDNAYGDRNLICS 949
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIC (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvP PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.514e-47 Identity = 87/140 (62.14%), Postives = 108/140 (77.14%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + DLR K +AGIE EDVAKRL+DYGFH PTMS+PVPGTL+IEPTESES EELDR+C+A++ I +EI +++G D +N LK +PH +++ D W Y RE AAYPASWL+ KFWP GRVDNVYGDRNL+C+ LP Sbjct: 820 ILDLRPFKKSAGIEVEDVAKRLIDYGFHAPTMSFPVPGTLMIEPTESESLEELDRFCEAMLLIYQEILDVQSGTLDKTDNPLKNSPHTAAMVTSDRWDHLYPRERAAYPASWLKDHKFWPYVGRVDNVYGDRNLVCSCLP 959
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.552e-47 Identity = 88/140 (62.86%), Postives = 103/140 (73.57%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + DLR K +AGIE EDVAKRL D FHGPTMSWPVP TL+IEPTESESK ELDR CDALI IREEI +IE GKAD NNVL +PH +++ D W PYSR AA+P +KFWP GR+DNV+GD+NL+C+ P Sbjct: 850 IIDLRMFKESAGIEAEDVAKRLQDMNFHGPTMSWPVPNTLMIEPTESESKYELDRLCDALILIREEIREIETGKADRKNNVLVNSPHTEKVIVADNWNYPYSRSKAAFPTPATVASKFWPTVGRIDNVHGDKNLVCSCPP 989
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPF (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.379e-45 Identity = 87/136 (63.97%), Postives = 107/136 (78.68%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLIC 418 + DLR LK+++GI +DVAKRL+D+GFH PTMS+PV GTL+IEPTESESKEELDR+CDA+I IREEI +ENG D +N LK APH + L+G+ WT PYSRE A YP + L K+WP GRVDNV+GDRNL+C Sbjct: 807 ILDLRPLKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEPTESESKEELDRFCDAMIRIREEIRAVENGTLDKDDNPLKNAPHTAAELVGE-WTHPYSREQAVYPVASLIEGKYWPPVGRVDNVFGDRNLVC 941
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_BORPD (Glycine dehydrogenase [decarboxylating] OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gcvP PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.802e-45 Identity = 83/140 (59.29%), Postives = 106/140 (75.71%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + D+R LK+++GI ED+AKRLMDYGFH PTMS+PV GTL++EPTESE EL+R+ DA+I+IREEIAQ+E G+ D +NVLK APH +L+ + W Y R+ AAYP + LR AK+WP RVDN YGDRNL+C LP Sbjct: 813 ILDVRPLKDSSGISAEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEGLAELERFIDAMIAIREEIAQVERGERDRDDNVLKNAPHTAQMLLAEEWLHDYPRQQAAYPVASLRDAKYWPPVARVDNAYGDRNLVCACLP 952
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_PSEFS (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas fluorescens (strain SBW25) GN=gcvP PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.353e-45 Identity = 86/136 (63.24%), Postives = 108/136 (79.41%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLIC 418 + DLR LK+++GI +DVAKRL+D+GFH PTMS+PV GTL+IEPTESESKEELDR+CDA+I+IREEI +ENG D +N LK APH + L+G+ W+ PYSRE A YP + L K+WP GRVDNV+GDRNL+C Sbjct: 803 ILDLRPLKDSSGISVDDVAKRLIDFGFHAPTMSFPVAGTLMIEPTESESKEELDRFCDAMIAIREEIRAVENGTLDKDDNPLKNAPHTAAELVGE-WSHPYSREQAVYPVASLIEGKYWPPVGRVDNVFGDRNLVC 937
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_PROMM (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvP PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.073e-45 Identity = 81/137 (59.12%), Postives = 107/137 (78.10%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICT 421 + DLR LK +AG+E +D+AKRLMDYGFH PT+SWPV GT+++EPTESES EEL+R+CDA+I+IREE A IE+G+ D NN L+ APH + + + W +PYSR AA+P + R +KFWPA R+DN YGDRNL+C+ Sbjct: 808 ILDLRPLKRSAGLEVDDIAKRLMDYGFHAPTVSWPVAGTVMVEPTESESLEELNRFCDAMIAIREETAAIESGQIDPQNNPLRRAPHTLAAVTAEVWDRPYSRAEAAFPLAEQRQSKFWPAVSRIDNAYGDRNLLCS 944 The following BLAST results are available for this feature:
BLAST of CK932859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932859 ID=CK932859; Name=CK932859; organism=Citrus sinensis; type=EST; length=701bpback to top |