CK932859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEF5 (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.252e-42 Identity = 83/140 (59.29%), Postives = 100/140 (71.43%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + DLR LK GI EDVAKRLMDYGFH PTMS+PVPGTL++EPTESESK ELDR+ +A++SIR EIAQ++ G +N LKGAPH + + G W + YS E A P + R K+WPA RVDNVYGDRNL C +P Sbjct: 811 ILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFIEAMLSIRAEIAQVQEGNWPAEDNPLKGAPHTLADITG-VWERSYSIEQAVLPTAHTRAHKYWPAVNRVDNVYGDRNLFCACVP 949
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_RHIL3 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gcvP PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.208e-41 Identity = 81/140 (57.86%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + D R L +++G+ +DVAKRL+D GFH PTMSWPV GTL+IEPTESE+K ELDR+C+A+++IREE IE+G+ D NN LK APH L+G+ W +PYSRE A +P R K+W RVDNVYGDRNLICT P Sbjct: 807 IIDTRPLVDSSGVTVDDVAKRLIDCGFHAPTMSWPVAGTLMIEPTESETKAELDRFCEAILAIREEARAIEDGRMDKVNNPLKNAPHTVEDLVGE-WDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPP 945
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_RHIE6 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium etli (strain CIAT 652) GN=gcvP PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.208e-41 Identity = 81/140 (57.86%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + D R L +++G+ +DVAKRL+D GFH PTMSWPV GTL+IEPTESE+K ELDR+C+A+++IREE IE+G+ D NN LK APH L+G+ W +PYSRE A +P R K+W RVDNVYGDRNLICT P Sbjct: 807 IIDTRPLVDSSGVTVDDVAKRLIDCGFHAPTMSWPVSGTLMIEPTESETKAELDRFCEAMLAIREEARAIEDGRMDKINNPLKNAPHTVEDLVGE-WDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPP 945
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_RHOPA (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris GN=gcvP PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.578e-41 Identity = 79/140 (56.43%), Postives = 100/140 (71.43%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + D R LK + G+ +D+AKRL+DYGFH PTMS+PVPGTL+IEPTESESK E+DR+CDA+I+IR EIAQ+E G+ I + L+ APH + WT+PY R +PA R K+W GRVDNVYGDRNLIC+ P Sbjct: 836 IIDPRALKTSTGVTVDDIAKRLIDYGFHAPTMSFPVPGTLMIEPTESESKAEIDRFCDAMIAIRREIAQVEAGRYPIEQSPLRHAPHTAHDVTSAEWTRPYPRTEGCFPAPNSRTDKYWSPVGRVDNVYGDRNLICSCPP 975
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_MOUSE (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Mus musculus GN=Gldc PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.578e-41 Identity = 79/141 (56.03%), Postives = 101/141 (71.63%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLR-FAKFWPATGRVDNVYGDRNLICTLLP 430 + D R K +A +E DVAKRL DYGFH PTMSWPV GTL+IEPTESE K ELDR+CDA+ISIR+EIA IE G+ D N LK +PH + + W +PYSRE AA+P +++ KFWP R+D++YGD++L+CT P Sbjct: 869 ILDTRPFKKSANVEAVDVAKRLQDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSCWDRPYSREVAAFPLPFVKPENKFWPTIARIDDIYGDQHLVCTCPP 1009
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_XANCP (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris GN=gcvP PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41 Identity = 77/140 (55.00%), Postives = 103/140 (73.57%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + D+R L+ T+GI ED+AKRL+D+GFH PT+S+PV GTL++EPTESES+ ELDR+ DA+I IREEI IE+G+ D +N LK APH + + WT Y RE AA+P L+ K+WP GRVDNVYGD+N++C +P Sbjct: 826 ILDVRPLEKTSGIGAEDIAKRLIDFGFHAPTLSFPVAGTLMVEPTESESQHELDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAYPRELAAFPLPSLKQQKYWPPVGRVDNVYGDKNVMCACIP 965
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_XANC8 (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gcvP PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41 Identity = 77/140 (55.00%), Postives = 103/140 (73.57%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + D+R L+ T+GI ED+AKRL+D+GFH PT+S+PV GTL++EPTESES+ ELDR+ DA+I IREEI IE+G+ D +N LK APH + + WT Y RE AA+P L+ K+WP GRVDNVYGD+N++C +P Sbjct: 826 ILDVRPLEKTSGIGAEDIAKRLIDFGFHAPTLSFPVAGTLMVEPTESESQHELDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAYPRELAAFPLPSLKQQKYWPPVGRVDNVYGDKNVMCACIP 965
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_STRMK (Glycine dehydrogenase [decarboxylating] OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvP PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41 Identity = 77/140 (55.00%), Postives = 103/140 (73.57%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + D+R L+ T+GI EDVAKRL+D+GFH PT+S+PV GTL++EPTESES ELDR+ DA+I IREEI IE+G+ D +N LK APH + + WT Y RE AA+P + L+ +K+WP RVDNVYGD+N++C +P Sbjct: 805 ILDVRPLEKTSGIGAEDVAKRLIDFGFHAPTLSFPVAGTLMVEPTESESLHELDRFIDAMIQIREEITAIEDGRLDREDNPLKNAPHTATAVTASEWTHAYPRELAAFPLASLKQSKYWPPVARVDNVYGDKNVMCACIP 944
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP_HUMAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41 Identity = 79/141 (56.03%), Postives = 101/141 (71.63%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLR-FAKFWPATGRVDNVYGDRNLICTLLP 430 + D R K +A IE DVAKRL DYGFH PTMSWPV GTL++EPTESE K ELDR+CDA+ISIR+EIA IE G+ D N LK +PH + + W +PYSRE AA+P +++ KFWP R+D++YGD++L+CT P Sbjct: 864 ILDTRPFKKSANIEAVDVAKRLQDYGFHAPTMSWPVAGTLMVEPTESEDKAELDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSHWDRPYSREVAAFPLPFVKPENKFWPTIARIDDIYGDQHLVCTCPP 1004
BLAST of CK932859 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEPK (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas putida (strain KT2440) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41 Identity = 81/140 (57.86%), Postives = 102/140 (72.86%), Query Frame = 2 Query: 11 LCDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLIIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 430 + DLR LK GI EDVAKRLMDYGFH PTMS+PVPGTL++EPTESESK ELDR+ +A+++IR EI +++ G NN LK APH + ++G W +PYS E A P++ +R K+WPA RVDNVYGDRNL C +P Sbjct: 814 ILDLRPLKALTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLAIRAEIDEVQQGNWPAENNPLKHAPHTLADVLG-VWDRPYSLEQAVAPSAHVRQHKYWPAVNRVDNVYGDRNLFCACVP 952 The following BLAST results are available for this feature:
BLAST of CK932859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932859 ID=CK932859; Name=CK932859; organism=Citrus sinensis; type=EST; length=701bpback to top |