CK932919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932919 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSI (Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.823e-11 Identity = 49/129 (37.98%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 232 NLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPAS----VSKAPPTFDLKPEIICRVADVRYLVSKKTDKVYTKMTLLPL-PEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRASDQS 603 N LW A AGP SLP G VVYFPQGH E A ++ S+ P +L P++IC++ +V +TD+VY +MTL PL P+ + + + EL GS F K L ASD S Sbjct: 28 NSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAEL------------GSANKQPTNYFCKTLTASDTS 144
BLAST of CK932919 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11 Identity = 47/124 (37.90%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 241 LWQAFAGPPPSLPKKGDLVVYFPQGH---LEYSAPASVSKAPPTFDLKPEIICRVADVRYLVSKKTDKVYTKMTLLPLPEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRASDQS 603 LW A AGP ++PK+G+ V YFPQGH LE S + + P F+L +I+C V +V +D+VY ++ L P + ELQDL E TA+S F K L ASD S Sbjct: 25 LWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDL--------EKCTAHS----FCKTLTASDTS 136
BLAST of CK932919 vs. ExPASy Swiss-Prot
Match: ARFH_ARATH (Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11 Identity = 50/129 (38.76%), Postives = 61/129 (47.29%), Query Frame = 1 Query: 232 NLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSKA----PPTFDLKPEIICRVADVRYLVSKKTDKVYTKMTLLPL-PEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRASDQS 603 N LW A AGP SLP G VVYFPQGH E A + + P L P++IC++ +V +TD+VY +MTL PL PE E F EL G + F K L ASD S Sbjct: 20 NSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIEL------------GIPSKQPSNYFCKTLTASDTS 136
BLAST of CK932919 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11 Identity = 32/77 (41.56%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 241 LWQAFAGPPPSLPKKGDLVVYFPQGH---LEYSAPASVSKAPPTFDLKPEIICRVADVRYLVSKKTDKVYTKMTLLP 462 LW A AGP +LP++G+ V YFP+GH LE S + + P+F+L +I+C+V +++ +TD+VY ++TLLP Sbjct: 23 LWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLP 99
BLAST of CK932919 vs. ExPASy Swiss-Prot
Match: ARFY_ORYSJ (Auxin response factor 25 OS=Oryza sativa subsp. japonica GN=ARF25 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11 Identity = 52/130 (40.00%), Postives = 64/130 (49.23%), Query Frame = 1 Query: 232 NLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASVSK-----APPTFDLKPEIICRVADVRYLVSKKTDKVYTKMTLLPL-PEMVGENFKGKELQDLVVDNKRDGEGSTANSTPPLFYKKLRASDQS 603 N LW A AGP SLP VVYFPQGH E A AS +K P +L P++IC++ +V +TD+VY +MTL PL PE E F EL G+ + F K L ASD S Sbjct: 26 NSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVA-ASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMEL------------GAASKQPTNYFCKTLTASDTS 142
BLAST of CK932919 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.047e-11 Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 1 Query: 187 DDLIFTEISDKDDDYNLLLWQAFAGPPPSLPKKGDLVVYFPQGHLEYSAPASV----SKAPPTFDLKPEIICRVADVRYLVSKKTDKVYTKMTLLP 462 DD + D LW+ AGP +P+ + V YFPQGH+E ++ S+ P FDL P+I+CRV DV +TD+VY ++TL P Sbjct: 8 DDFGSSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQP 103 The following BLAST results are available for this feature:
BLAST of CK932919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932919 ID=CK932919; Name=CK932919; organism=Citrus sinensis; type=EST; length=630bpback to top |