CK932924

Overview
NameCK932924
Unique NameCK932924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length291
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A_SPOFR (Eukaryotic translation initiation factor 5A OS=Spodoptera frugiperda GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.335e-23
Identity = 51/92 (55.43%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 276
            IDIF+GKK +DI PS+HN DVPHV R DYQL DIS+DG+++L+ +NG+ ++DL++P D  L TQL+  F  GK+L+ TV+ S GEE + A+K
Sbjct:   63 IDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A_SPOEX (Eukaryotic translation initiation factor 5A OS=Spodoptera exigua GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.335e-23
Identity = 51/92 (55.43%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 276
            IDIF+GKK +DI PS+HN DVPHV R DYQL DIS+DG+++L+ +NG+ ++DL++P D  L TQL+  F  GK+L+ TV+ S GEE + A+K
Sbjct:   63 IDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A2_SCHPO (Eukaryotic translation initiation factor 5A-2 OS=Schizosaccharomyces pombe GN=tif51b PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.608e-22
Identity = 49/93 (52.69%), Postives = 74/93 (79.57%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 279
            +DIF+G+K +D+ PS+HN DVP V R +YQL++I +DG+++L+T +G TKDD+RLP  E L  ++++GF EGKDL++TV+S+MGEE   A +D
Sbjct:   63 LDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFEEGKDLIITVVSAMGEEIALACRD 153          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A1_SCHPO (Eukaryotic translation initiation factor 5A-1 OS=Schizosaccharomyces pombe GN=tif51a PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.566e-22
Identity = 48/93 (51.61%), Postives = 74/93 (79.57%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 279
            +DIF+G+K +D+ PS+HN DVP V R +YQL++I +DG+++L+T +G TKDD+RLP  E L  ++++GF EG+DL++TV+S+MGEE   A +D
Sbjct:   63 LDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFDEGRDLIITVVSAMGEETALACRD 153          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A_CANAL (Eukaryotic translation initiation factor 5A OS=Candida albicans GN=ANB1 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.058e-20
Identity = 47/93 (50.54%), Postives = 75/93 (80.65%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 279
            IDIF+GKK +D+ PS+HN +VP+V+R ++QL+DI +DG++SL+T +G+TKDD+++P  E L  +L+  F EGKDL++T++S+MGEE   + K+
Sbjct:   61 IDIFTGKKLEDLSPSTHNMEVPNVSRQEFQLLDI-DDGYLSLMTADGDTKDDVKVPEGE-LGDKLQSEFDEGKDLIVTIISAMGEEAAISYKE 151          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A_DROME (Eukaryotic translation initiation factor 5A OS=Drosophila melanogaster GN=eIF-5A PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 4.019e-20
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 276
            IDIFS KK +DI PS+HN DVP+V R D QLI IS+D F++L+TE+G+ ++DL++P  E L  QL+  F  GKDL+ TV+ + GEE + A+K
Sbjct:   62 IDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGE-LGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A2_YEAST (Eukaryotic translation initiation factor 5A-2 OS=Saccharomyces cerevisiae GN=HYP2 PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 5.249e-20
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 279
            IDIF+GKK +D+ PS+HN +VP V R +YQL+DI +DGF+SL+  +G+TKDD++ P  E L   L+  F EGKDL++T++S+MGEE   + K+
Sbjct:   62 IDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAPEGE-LGDSLQTAFDEGKDLMVTIISAMGEEAAISFKE 152          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A1_YEAST (Eukaryotic translation initiation factor 5A-1 OS=Saccharomyces cerevisiae GN=HYP1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 6.856e-20
Identity = 46/93 (49.46%), Postives = 71/93 (76.34%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 279
            +DIF+GKK +D+ PS+HN +VP V R++YQL+DI +DG++SL+T +G TKDD++ P  E L   ++  F EGKDL++T++S+MGEE   + K+
Sbjct:   62 LDIFTGKKLEDLSPSTHNLEVPFVKRSEYQLLDI-DDGYLSLMTMDGETKDDVKAPEGE-LGDSMQAAFDEGKDLMVTIISAMGEEAAISFKE 152          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A2_PONAB (Eukaryotic translation initiation factor 5A-2 OS=Pongo abelii GN=EIF5A2 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18
Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 276
            IDIF+GKK +DI PS+HN DVP++ R DYQLI I +DG++SLLTE G  ++DL+LP  E L  +++  +  G+D+ ++VM +M EE   A+K
Sbjct:   61 IDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150          
BLAST of CK932924 vs. ExPASy Swiss-Prot
Match: IF5A2_MOUSE (Eukaryotic translation initiation factor 5A-2 OS=Mus musculus GN=Eif5a2 PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18
Identity = 46/92 (50.00%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    1 IDIFSGKKQKDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 276
            IDIF+GKK +DI PS+HN DVP++ R DYQLI I +DG++SLLTE G  ++DL+LP  E L  +++  +  G+D+ ++VM +M EE   A+K
Sbjct:   61 IDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150          
The following BLAST results are available for this feature:
BLAST of CK932924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
IF5A_SPOFR1.335e-2355.43Eukaryotic translation initiation factor 5A OS=Spo... [more]
IF5A_SPOEX1.335e-2355.43Eukaryotic translation initiation factor 5A OS=Spo... [more]
IF5A2_SCHPO5.608e-2252.69Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A1_SCHPO9.566e-2251.61Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A_CANAL1.058e-2050.54Eukaryotic translation initiation factor 5A OS=Can... [more]
IF5A_DROME4.019e-2053.26Eukaryotic translation initiation factor 5A OS=Dro... [more]
IF5A2_YEAST5.249e-2051.61Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A1_YEAST6.856e-2049.46Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A2_PONAB2.880e-1850.00Eukaryotic translation initiation factor 5A-2 OS=P... [more]
IF5A2_MOUSE2.880e-1850.00Eukaryotic translation initiation factor 5A-2 OS=M... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932924 ID=CK932924; Name=CK932924; organism=Citrus sinensis; type=EST; length=291bp
ATTGATATCTTCAGTGGAAAGAAGCAAAAAGATATTGTCCCCTCTTCTCA
TAACTGTGATGTTCCCCATGTCAACCGTACCGACTATCAGTTGATTGATA
TTTCTGAGGATGGATTTGTGAGTTTGCTGACTGAAAATGGGAACACCAAG
GATGATCTGAGGCTCCCAACCGATGAGACTCTGCTGACCCAGCTCAAGGA
CGGTTTTGCTGAGGGGAAGGACTTGGTTTTGACTGTCATGTCTTCAATGG
GCGAGGAGCAGATCTGTGCCCTCAAGGATATTGGCCCAAAG
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