CK932933

Overview
NameCK932933
Unique NameCK932933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_PROMS (LL-diaminopimelate aminotransferase OS=Prochlorococcus marinus (strain AS9601) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.215e-29
Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            V  N N  KL+AGYLFPEIA+R   +     +AE+I LGIGD TEP+P     A+ K    + T +G+ GYG EQG   LR  I+   +   G  I   +IFVSDG+KCD S +  + G + ++AV DP YP YVDS+V+ G+TG+  ++   Y  + Y+     N F P
Sbjct:    2 VQVNENYLKLKAGYLFPEIAKRVKLYSQSNKNAEIIKLGIGDVTEPLPRACIEAMGKALDDMGTTDGFRGYGPEQGYAWLREKISEHDFISRGCQISPEEIFVSDGSKCDSSNILDILGKDNSIAVTDPVYPVYVDSNVMTGRTGDALENG-TYQGLTYLAINEANNFLP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_PROM9 (LL-diaminopimelate aminotransferase OS=Prochlorococcus marinus (strain MIT 9312) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.215e-29
Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            V  N N  KL+AGYLFPEIA+R   +      AE+I LGIGD TEP+P     A++K    + T EG+ GYG EQG   LR  I+   +   G  I   +IFVSDG+KCD S +  + G + ++AV DP YP YVDS+V+ G+TG+  ++   Y  + Y+     N F P
Sbjct:    2 VQVNENYLKLKAGYLFPEIAKRVKIYSQSNKSAEIIKLGIGDVTEPLPRACIDAMSKALDDMGTAEGFRGYGPEQGYSWLREKISEHDFISRGCQILPEEIFVSDGSKCDSSNILDILGKDNSIAVTDPVYPVYVDSNVMTGRTGDALENG-TYQGLTYLAINEGNNFLP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_CLOPH (LL-diaminopimelate aminotransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dapL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.215e-29
Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KLQ  YLF  I ++   +  + PD  VISLGIGD T P+   I SAL K +  ++ +E + GY  + G + LR+AIA   Y+  G++    +IF+SDGAK D   +  +F  N  +AV DP YP YVD++V+ G+TGEF     K+  + YM CT EN F P
Sbjct:    5 NENYLKLQGSYLFSTIGKKVRTYKEENPDKNVISLGIGDVTLPLAPSIISALHKATDEMAAKETFKGYSPDLGYEFLRSAIAKHDYEARGVQIALDEIFISDGAKSDSGNIGDIFAENNKIAVCDPVYPVYVDTNVMAGRTGEFNYTTGKWSNVIYMPCTKENKFVP 171          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_GEOSF (LL-diaminopimelate aminotransferase OS=Geobacter sp. (strain FRC-32) GN=dapL PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.073e-29
Identity = 72/167 (43.11%), Postives = 97/167 (58.08%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL+AGYLFPEI RR  A     P A+VI LGIGD T P+   +  A       L+T + ++GYG EQG   L  AI    YK LG+  +  +IF+SDG+KCD + +  +F  +  +A+ DP YP Y D++V++G+TGE  +    Y  I YM C   NGF P
Sbjct:    5 NDNYLKLKAGYLFPEIGRRVRAFAEANPSAKVIRLGIGDVTRPLAPAVLKAFHDAVDDLATTDKFAGYGPEQGYDWLINAIIDKSYKPLGVSLKTEEIFISDGSKCDCANILDIFAMDNVVAIGDPVYPVYNDTNVMIGRTGEADEKG-YYKGIVYMPCNEANGFIP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_GEOUR (LL-diaminopimelate aminotransferase OS=Geobacter uraniireducens (strain Rf4) GN=dapL PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.707e-29
Identity = 72/167 (43.11%), Postives = 96/167 (57.49%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL+AGYLFPEI RR  A     P A+VI LGIGD T P+   +  A       L T + ++GYG EQG   L  AI    YK LG+  +  ++F+SDG+KCD + +  +F  +  +A+ DP YP Y D++V++G+TGE   D   Y  I YM C  EN F P
Sbjct:    5 NDNYLKLKAGYLFPEIGRRVRAFAEANPSAKVIRLGIGDVTRPLAPAVLKAFHAAVDDLGTTDNFAGYGPEQGYDWLINAIIEKSYKPLGVSLKTDEMFISDGSKCDCANILDIFALDNVVAIGDPVYPVYNDTNVMIGRTGE-ADDKGYYKGIVYMPCNEENHFIP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_GEOMG (LL-diaminopimelate aminotransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dapL PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.535e-29
Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL+AGYLFPEI RR        P+A+VI LGIGD T P+   I  A       L+T + ++GYG EQG   L  AI    YK LG+  +  ++F+SDG+KCD + +  +F  +  +A+ DP YP Y D++V++G+TG+  +    Y  I YM CT  NGF P
Sbjct:    5 NDNYLKLKAGYLFPEIGRRVREFSAANPEAKVIRLGIGDVTRPLAPAIIKAFHDAVDDLATIDNFAGYGPEQGYDWLINAIIEKSYKPLGVSLKTEEMFISDGSKCDCANILDIFALDNVVAIGDPVYPVYNDTNVMIGRTGDADEKG-YYKGIVYMPCTEANGFIP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_CLOTH (LL-diaminopimelate aminotransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dapL PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.535e-29
Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL   YLF EIARR      + P+A++I LGIGD T+P+   +  AL K    ++ +E + GYG EQG   L + I    Y   GI  +E ++FVSDGAK D    Q +FG +  +AV DP YP YVDS+V+ G+TG++  +   +  I Y+ CTAEN F P
Sbjct:    5 NENYLKLPGSYLFSEIARRVDNFRKENPNAKIIRLGIGDVTKPLAPAVIDALHKAVDEMAKEETFKGYGPEQGYSFLVSKIIEYDYMPRGIRLDEDEVFVSDGAKSDTGNFQEIFGLDNKVAVTDPVYPVYVDSNVMAGRTGKYLANG-YFENITYLPCTAENNFIP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_METS3 (LL-diaminopimelate aminotransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=dapL PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.617e-29
Identity = 67/170 (39.41%), Postives = 97/170 (57.06%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            V  N N  KL++ YLF E+ARR+A      PDA++I +GIGD T+P+   +  A       +   + + GYG EQG   L   I    ++  G+  +  ++F+SDGAKCD   +Q +F     +AV DP Y  YVD++V+ G+TGE  KD   Y  + Y++C AENGF P
Sbjct:    3 VKINENYLKLKSSYLFVEVARREAEFQKNNPDADIIKMGIGDVTKPLAPSVIKAFQGAVDEMGNADTFRGYGPEQGYDFLAEEIIKNDFEPFGVSLDTDEVFISDGAKCDTGNIQEIFDLGNKIAVTDPVYTVYVDTNVMAGRTGE-MKDDGMYEGLTYLKCNAENGFVP 171          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_DESDA (LL-diaminopimelate aminotransferase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=dapL PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.876e-29
Identity = 74/167 (44.31%), Postives = 96/167 (57.49%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KLQ+ YLF +IAR+  A     PD  VISLGIGD T P+P  +  AL K    +     + GYG EQG   LR  I    YK  G+     +IFVSDGAK D+   Q +F  +  +AV DP YP YVDS+V+ G++GE  KD++ + +I Y+ C  EN F P
Sbjct:    5 NSNFLKLQSNYLFADIARKVTAFKNANPDRRVISLGIGDVTRPLPPAVIQALHKAVDEMGDATLFRGYGPEQGYAFLRDVIMQYDYKVRGVTLAPDEIFVSDGAKPDVGNFQELFAQDSIVAVTDPVYPVYVDSNVMAGRSGEI-KDSQ-WSRIVYLPCIKENDFVP 169          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_PROMP (LL-diaminopimelate aminotransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dapL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.755e-28
Identity = 71/170 (41.76%), Postives = 99/170 (58.24%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            V  N N  KL+AGYLFPEI++R   +      ++VI LGIGD TEP+P+    A+ +    + T  G+ GYG EQG   LR  I+   +   G  I   +IFVSDG+KCD S +  + GS+  +AV DP YP YVD++V+ G+TGE  ++    G + Y+    EN F P
Sbjct:    2 VKVNENYLKLKAGYLFPEISKRVNNYTQANSSSKVIKLGIGDVTEPLPKACVKAMGEALNEMGTNNGFKGYGPEQGYGWLREKISVNDFISRGCQISSEEIFVSDGSKCDSSNILDILGSDNLIAVTDPVYPVYVDTNVMTGRTGETLQNGTYQGLV-YLAINEENKFQP 170          
The following BLAST results are available for this feature:
BLAST of CK932933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
DAPAT_PROMS1.215e-2942.35LL-diaminopimelate aminotransferase OS=Prochloroco... [more]
DAPAT_PROM91.215e-2942.94LL-diaminopimelate aminotransferase OS=Prochloroco... [more]
DAPAT_CLOPH1.215e-2942.51LL-diaminopimelate aminotransferase OS=Clostridium... [more]
DAPAT_GEOSF2.073e-2943.11LL-diaminopimelate aminotransferase OS=Geobacter s... [more]
DAPAT_GEOUR2.707e-2943.11LL-diaminopimelate aminotransferase OS=Geobacter u... [more]
DAPAT_GEOMG3.535e-2942.51LL-diaminopimelate aminotransferase OS=Geobacter m... [more]
DAPAT_CLOTH3.535e-2943.11LL-diaminopimelate aminotransferase OS=Clostridium... [more]
DAPAT_METS34.617e-2939.41LL-diaminopimelate aminotransferase OS=Methanobrev... [more]
DAPAT_DESDA7.876e-2944.31LL-diaminopimelate aminotransferase OS=Desulfovibr... [more]
DAPAT_PROMP1.755e-2841.76LL-diaminopimelate aminotransferase OS=Prochloroco... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932933 ID=CK932933; Name=CK932933; organism=Citrus sinensis; type=EST; length=758bp
GGGGAGTGACAGAGCACTCGAAAACATCCTGTTTTGGTGGTAGTAATTAG
TTGGTCAAAATTCAGCAAACATGTCGCTAGCTCCTCAATCCATTTCCACG
TCAATGATCTCTTCTTCTTCATCTGCTTTCTTATCCCCATCGAACTTGAA
CTTCAATTCAAGAAGACAGAATGCTTGGGTTCAAGCGAAGAGAATCAGTG
TTTGCAAATGCGTTGCCGCGCCTCAAGAAGAGAAAATTGCATACAAGACA
AAAGTCTCTCGTAATGGAAACTTGGGAAAACTTCAAGCAGGATACCTCTT
TCCAGAGATTGCTCGAAGAAAGGCTGCACACATGCTGAAATACCCAGATG
CAGAAGTGATTAGTCTTGGAATCGGTGACACCACTGAGCCCATTCCCGAA
GTTATAACTTCTGCATTGGCTAAGAGATCTTATGCATTGTCCACACAAGA
GGGCTATAGTGGTTATGGAGCTGAACAAGGTGAAAAGCCATTGAGAGCTG
CAATTGCTTCAACATTTTATAAGGACCTTGGCATAGAGGAAGGCGATATA
TTTGTTTCTGATGGTGCAAAATGTGACATATCCCGCCTTCAGATTGTTTT
TGGTTCTAATGTTACTATGGCAGTTCAAGATCCATCATACCCGGCTTATG
TAGACTCGAGTGTCATTATGGGCCAAACTGGAGAGTTTCAAAAGGATGCC
GAGAAGTACGGAAAGATTGAATACATGAGGTGTACTGCAGAGAATGGTTT
TTTTCCTG
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