CK932933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_PROMS (LL-diaminopimelate aminotransferase OS=Prochlorococcus marinus (strain AS9601) GN=dapL PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.215e-29 Identity = 72/170 (42.35%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 V N N KL+AGYLFPEIA+R + +AE+I LGIGD TEP+P A+ K + T +G+ GYG EQG LR I+ + G I +IFVSDG+KCD S + + G + ++AV DP YP YVDS+V+ G+TG+ ++ Y + Y+ N F P Sbjct: 2 VQVNENYLKLKAGYLFPEIAKRVKLYSQSNKNAEIIKLGIGDVTEPLPRACIEAMGKALDDMGTTDGFRGYGPEQGYAWLREKISEHDFISRGCQISPEEIFVSDGSKCDSSNILDILGKDNSIAVTDPVYPVYVDSNVMTGRTGDALENG-TYQGLTYLAINEANNFLP 170
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_PROM9 (LL-diaminopimelate aminotransferase OS=Prochlorococcus marinus (strain MIT 9312) GN=dapL PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.215e-29 Identity = 73/170 (42.94%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 V N N KL+AGYLFPEIA+R + AE+I LGIGD TEP+P A++K + T EG+ GYG EQG LR I+ + G I +IFVSDG+KCD S + + G + ++AV DP YP YVDS+V+ G+TG+ ++ Y + Y+ N F P Sbjct: 2 VQVNENYLKLKAGYLFPEIAKRVKIYSQSNKSAEIIKLGIGDVTEPLPRACIDAMSKALDDMGTAEGFRGYGPEQGYSWLREKISEHDFISRGCQILPEEIFVSDGSKCDSSNILDILGKDNSIAVTDPVYPVYVDSNVMTGRTGDALENG-TYQGLTYLAINEGNNFLP 170
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_CLOPH (LL-diaminopimelate aminotransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dapL PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.215e-29 Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEG--DIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 N N KLQ YLF I ++ + + PD VISLGIGD T P+ I SAL K + ++ +E + GY + G + LR+AIA Y+ G++ +IF+SDGAK D + +F N +AV DP YP YVD++V+ G+TGEF K+ + YM CT EN F P Sbjct: 5 NENYLKLQGSYLFSTIGKKVRTYKEENPDKNVISLGIGDVTLPLAPSIISALHKATDEMAAKETFKGYSPDLGYEFLRSAIAKHDYEARGVQIALDEIFISDGAKSDSGNIGDIFAENNKIAVCDPVYPVYVDTNVMAGRTGEFNYTTGKWSNVIYMPCTKENKFVP 171
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_GEOSF (LL-diaminopimelate aminotransferase OS=Geobacter sp. (strain FRC-32) GN=dapL PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.073e-29 Identity = 72/167 (43.11%), Postives = 97/167 (58.08%), Query Frame = 2 Query: 263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 N N KL+AGYLFPEI RR A P A+VI LGIGD T P+ + A L+T + ++GYG EQG L AI YK LG+ + +IF+SDG+KCD + + +F + +A+ DP YP Y D++V++G+TGE + Y I YM C NGF P Sbjct: 5 NDNYLKLKAGYLFPEIGRRVRAFAEANPSAKVIRLGIGDVTRPLAPAVLKAFHDAVDDLATTDKFAGYGPEQGYDWLINAIIDKSYKPLGVSLKTEEIFISDGSKCDCANILDIFAMDNVVAIGDPVYPVYNDTNVMIGRTGEADEKG-YYKGIVYMPCNEANGFIP 170
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_GEOUR (LL-diaminopimelate aminotransferase OS=Geobacter uraniireducens (strain Rf4) GN=dapL PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.707e-29 Identity = 72/167 (43.11%), Postives = 96/167 (57.49%), Query Frame = 2 Query: 263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 N N KL+AGYLFPEI RR A P A+VI LGIGD T P+ + A L T + ++GYG EQG L AI YK LG+ + ++F+SDG+KCD + + +F + +A+ DP YP Y D++V++G+TGE D Y I YM C EN F P Sbjct: 5 NDNYLKLKAGYLFPEIGRRVRAFAEANPSAKVIRLGIGDVTRPLAPAVLKAFHAAVDDLGTTDNFAGYGPEQGYDWLINAIIEKSYKPLGVSLKTDEMFISDGSKCDCANILDIFALDNVVAIGDPVYPVYNDTNVMIGRTGE-ADDKGYYKGIVYMPCNEENHFIP 170
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_GEOMG (LL-diaminopimelate aminotransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dapL PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.535e-29 Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 N N KL+AGYLFPEI RR P+A+VI LGIGD T P+ I A L+T + ++GYG EQG L AI YK LG+ + ++F+SDG+KCD + + +F + +A+ DP YP Y D++V++G+TG+ + Y I YM CT NGF P Sbjct: 5 NDNYLKLKAGYLFPEIGRRVREFSAANPEAKVIRLGIGDVTRPLAPAIIKAFHDAVDDLATIDNFAGYGPEQGYDWLINAIIEKSYKPLGVSLKTEEMFISDGSKCDCANILDIFALDNVVAIGDPVYPVYNDTNVMIGRTGDADEKG-YYKGIVYMPCTEANGFIP 170
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_CLOTH (LL-diaminopimelate aminotransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dapL PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.535e-29 Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 2 Query: 263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 N N KL YLF EIARR + P+A++I LGIGD T+P+ + AL K ++ +E + GYG EQG L + I Y GI +E ++FVSDGAK D Q +FG + +AV DP YP YVDS+V+ G+TG++ + + I Y+ CTAEN F P Sbjct: 5 NENYLKLPGSYLFSEIARRVDNFRKENPNAKIIRLGIGDVTKPLAPAVIDALHKAVDEMAKEETFKGYGPEQGYSFLVSKIIEYDYMPRGIRLDEDEVFVSDGAKSDTGNFQEIFGLDNKVAVTDPVYPVYVDSNVMAGRTGKYLANG-YFENITYLPCTAENNFIP 170
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_METS3 (LL-diaminopimelate aminotransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=dapL PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.617e-29 Identity = 67/170 (39.41%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 V N N KL++ YLF E+ARR+A PDA++I +GIGD T+P+ + A + + + GYG EQG L I ++ G+ + ++F+SDGAKCD +Q +F +AV DP Y YVD++V+ G+TGE KD Y + Y++C AENGF P Sbjct: 3 VKINENYLKLKSSYLFVEVARREAEFQKNNPDADIIKMGIGDVTKPLAPSVIKAFQGAVDEMGNADTFRGYGPEQGYDFLAEEIIKNDFEPFGVSLDTDEVFISDGAKCDTGNIQEIFDLGNKIAVTDPVYTVYVDTNVMAGRTGE-MKDDGMYEGLTYLKCNAENGFVP 171
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_DESDA (LL-diaminopimelate aminotransferase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=dapL PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.876e-29 Identity = 74/167 (44.31%), Postives = 96/167 (57.49%), Query Frame = 2 Query: 263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGI--EEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 N N KLQ+ YLF +IAR+ A PD VISLGIGD T P+P + AL K + + GYG EQG LR I YK G+ +IFVSDGAK D+ Q +F + +AV DP YP YVDS+V+ G++GE KD++ + +I Y+ C EN F P Sbjct: 5 NSNFLKLQSNYLFADIARKVTAFKNANPDRRVISLGIGDVTRPLPPAVIQALHKAVDEMGDATLFRGYGPEQGYAFLRDVIMQYDYKVRGVTLAPDEIFVSDGAKPDVGNFQELFAQDSIVAVTDPVYPVYVDSNVMAGRSGEI-KDSQ-WSRIVYLPCIKENDFVP 169
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_PROMP (LL-diaminopimelate aminotransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dapL PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.755e-28 Identity = 71/170 (41.76%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757 V N N KL+AGYLFPEI++R + ++VI LGIGD TEP+P+ A+ + + T G+ GYG EQG LR I+ + G I +IFVSDG+KCD S + + GS+ +AV DP YP YVD++V+ G+TGE ++ G + Y+ EN F P Sbjct: 2 VKVNENYLKLKAGYLFPEISKRVNNYTQANSSSKVIKLGIGDVTEPLPKACVKAMGEALNEMGTNNGFKGYGPEQGYGWLREKISVNDFISRGCQISSEEIFVSDGSKCDSSNILDILGSDNLIAVTDPVYPVYVDTNVMTGRTGETLQNGTYQGLV-YLAINEENKFQP 170 The following BLAST results are available for this feature:
BLAST of CK932933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932933 ID=CK932933; Name=CK932933; organism=Citrus sinensis; type=EST; length=758bpback to top |