CK932935

Overview
NameCK932935
Unique NameCK932935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H3_PARLI (Histone H3, embryonic OS=Paracentrotus lividus PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.724e-57
Identity = 115/136 (84.56%), Postives = 118/136 (86.76%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H3_LYTPI (Histone H3, embryonic OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.724e-57
Identity = 115/136 (84.56%), Postives = 118/136 (86.76%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H3_DERIM (Histone H3, embryonic OS=Dermasterias imbricata PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.724e-57
Identity = 115/136 (84.56%), Postives = 118/136 (86.76%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H331_CAEEL (Histone H3.3 type 1 OS=Caenorhabditis elegans GN=his-71 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.724e-57
Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H32_CRILO (Histone H3.2 OS=Cricetulus longicaudatus PE=2 SV=3)

HSP 1 Score: 221.861 bits (564), Expect = 2.724e-57
Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTV LREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVTLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H3_ACRFO (Histone H3 OS=Acropora formosa PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.647e-57
Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAA KSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAAAKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H33_PONAB (Histone H3.3 OS=Pongo abelii PE=2 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 6.069e-57
Identity = 114/136 (83.82%), Postives = 117/136 (86.03%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRL REIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLAREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H332_CAEEL (Histone H3.3 type 2 OS=Caenorhabditis elegans GN=his-72 PE=1 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 6.069e-57
Identity = 114/136 (83.82%), Postives = 117/136 (86.03%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H31T_HUMAN (Histone H3.1t OS=Homo sapiens GN=HIST3H3 PE=1 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 1.766e-56
Identity = 113/136 (83.09%), Postives = 116/136 (85.29%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATK ARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRL+REIAQDFKTDLRF                 GLFEDTNLC IHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPKDIQLARRIRGERA 136          
BLAST of CK932935 vs. ExPASy Swiss-Prot
Match: H3_STRPU (Histone H3, embryonic OS=Strongylocentrotus purpuratus PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.306e-56
Identity = 114/136 (83.82%), Postives = 117/136 (86.03%), Query Frame = 2
Query:   68 MAGTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 475
            MA TKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRF                  LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVRLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136          
The following BLAST results are available for this feature:
BLAST of CK932935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H3_PARLI2.724e-5784.56Histone H3, embryonic OS=Paracentrotus lividus PE=... [more]
H3_LYTPI2.724e-5784.56Histone H3, embryonic OS=Lytechinus pictus PE=2 SV... [more]
H3_DERIM2.724e-5784.56Histone H3, embryonic OS=Dermasterias imbricata PE... [more]
H331_CAEEL2.724e-5784.56Histone H3.3 type 1 OS=Caenorhabditis elegans GN=h... [more]
H32_CRILO2.724e-5784.56Histone H3.2 OS=Cricetulus longicaudatus PE=2 SV=3[more]
H3_ACRFO4.647e-5784.56Histone H3 OS=Acropora formosa PE=3 SV=2[more]
H33_PONAB6.069e-5783.82Histone H3.3 OS=Pongo abelii PE=2 SV=3[more]
H332_CAEEL6.069e-5783.82Histone H3.3 type 2 OS=Caenorhabditis elegans GN=h... [more]
H31T_HUMAN1.766e-5683.09Histone H3.1t OS=Homo sapiens GN=HIST3H3 PE=1 SV=3[more]
H3_STRPU2.306e-5683.82Histone H3, embryonic OS=Strongylocentrotus purpur... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932935 ID=CK932935; Name=CK932935; organism=Citrus sinensis; type=EST; length=706bp
GGGGATCTCAATCGCCTTTAATTTTCCTGAGAAACAAACACGCTTTCCAC
TCATCCAATTTCAGAAAATGGCTGGTACCAAGCAGACGGCAAGGAAGTCC
ACGGGAGGGAAGGCGCCACGTAAGCAGCTGGCGACAAAGGCGGCTCGGAA
GTCGGCGCCAGCGACGGGAGGAGTGAAGAAGCCTCACCGTTTTAGGCCAG
GAACCGTGGCTTTAAGAGAAATTAGGAAGTACCAGAAGAGCACTGAGCTT
TTGATAAGGAAGCTTCCGTTCCAGAGGCTCGTGAGAGAAATCGCTCAGGA
TTTTAAGACCGATCTGAGGTTCCAGAGCAGCGCCGTTGCGGCTCTTCAAG
AAGCTGCTGAGGCTTATCTTGTGGGTCTCTTTGAAGATACCAATCTCTGC
GCCATTCATGCTAAGAGGGTCACTATCATGCCCAAAGATATTCAGCTTGC
TAGGAGGATCAGAGGAGAGAGAGCTTAGTCGATTAATTGATTTGTATCTA
GATCTGATTTGGCTTTTAGCGTTTCAGTTTCTAAGAAATGGGTATGCAAG
ATTGTTTTGGAATGTAATGGAAAGTTTGAATCTATTGTTACATTTGTTGG
GTTTTTGTTTTTGCATTCCATGTGTTTGTTAAAAGTCTTATCTTTCATTA
TAAATGAAGCAAAAGAATAGCGGATTCAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
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