CK932937

Overview
NameCK932937
Unique NameCK932937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length452
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.428e-19
Identity = 52/122 (42.62%), Postives = 72/122 (59.02%), Query Frame = 1
Query:   91 MSLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            +S++F +F          +  FD  Y  +W  DH+     G  ++L++D  SG+GF SKS Y  G   ++IKL   DSAG VTAFY++S G  H+E  FEFLGN  G+P  +QTNV+ NG G
Sbjct:   11 VSVLFLMFTANARARGRGAIDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGDTHDEVDFEFLGNRQGKPIAIQTNVFSNGQG 132          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.435e-19
Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1
Query:  205 GDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            G  L L+LD  SG+GF S  ++L+GK  +Q+KLV G+SAGTVT FY+ S G   +E  FEFLGN +G PY + TNVY  G G
Sbjct:   44 GKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSG 125          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.209e-18
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1
Query:  100 IFSLFVGLLMVVLVSS-----------AKFDDLYQTSWAFDHVQ--YDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            IFS+FV  L ++ V +             F   Y  +W   HV   + G+ + L +D  SG GF SK  Y  G   ++IK+  G++ G VTAFY++S G  H+E  FEFLGN  G+P  +QTN+++NG G
Sbjct:    6 IFSVFVVTLWIIRVDARVFGGRGIEKFVTFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGGGHDEIDFEFLGNNNGKPVTLQTNLFLNGEG 135          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 8.661e-17
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 1
Query:  142 SSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            S   FDD Y  +W  ++V     G  ++L+LD+ SG+GF SK+ Y  G   I+IK+   D++G VTAFY++S G  H+E  FEFLGN  G+   VQTNV+ NG G
Sbjct:   35 SKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGNTHDEVDFEFLGNKEGK-LAVQTNVFTNGKG 138          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.059e-14
Identity = 51/123 (41.46%), Postives = 67/123 (54.47%), Query Frame = 1
Query:   91 MSLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFYFEFLGNTTGEPYLVQTNVYVNG 444
            MSL  SL  G  +  L    +FD+ Y   +   +  V  DG +++L LD  +G+GF S   YL G  S  IKL    SAG V AFY+S+      NH+E  FEFLGN  G  + +QTN+Y NG
Sbjct:   11 MSLFTSLVSGFALQKL-PLIQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNG 132          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.383e-14
Identity = 48/130 (36.92%), Postives = 72/130 (55.38%), Query Frame = 1
Query:   79 SMAKMSLIFSLFVGLLMVVLVSS---AKFDDLYQTSWAFDH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFYFEFLGNTTGEPYLVQTNVYVNG 444
            +++++ +  SLF GL+    + +     F++ Y   +   +  V  DG +++L LD  +G+GF S   YL G  S  IKL    +AG V AFYMS+      NH+E  FEFLGN   + + VQTN+Y NG
Sbjct:    3 TLSRLLVFMSLFSGLVSGFALQNLPITSFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNG 132          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 5.254e-14
Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 1
Query:  139 VSSAKFDDLYQTSWAFDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGP---NHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            V ++ FD  ++T W   H + + D + L LD  +G+GF S   Y  G     IKL  G +AG  T+ Y+S++     +H+E   EFLG T G+PY +QTNV+V G G
Sbjct:   34 VPTSPFDREFRTLWGSQHQRREQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSG 140          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.171e-13
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 1
Query:  139 VSSAKFDDLYQTSWAFDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN---HNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            V S  F   ++  W   H + D + L + LD  SG+GF S   +  G     IKL  G +AG +T+ Y+S++  +   H+E   EFLG T G+PY +QTNVY+ G G
Sbjct:   38 VGSLNFYKGFRNLWGPQHQRMDQNALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSG 144          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 9.909e-13
Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1
Query:  190 HVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSD---GPNHNEFYFEFLGNTTGEPYLVQTNVYVNG 444
            ++Q +G   KL LD  SGAG  SK+KY +G  S ++KL  G ++G V AFY+S+      +H+E   E LG +  + + +QTNVY NG
Sbjct:   55 NIQVNGSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANG 142          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 39/84 (46.43%), Postives = 51/84 (60.71%), Query Frame = 1
Query:  202 DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDG---PNHNEFYFEFLGNTTGEPYLVQTNVYVNG 444
            D  +++L LD Y+G+GF S S Y  G  S  IKL G  +AG V AFY S+      +H+E   EFLGN  G+P+  QTN+Y NG
Sbjct:   58 DDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNG 141          
The following BLAST results are available for this feature:
BLAST of CK932937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
XTH2_ARATH1.428e-1942.62Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH19_ARATH2.435e-1953.66Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH1.209e-1838.46Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH8.661e-1745.71Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH1.059e-1441.46Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH1.383e-1436.92Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH5.254e-1439.25Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH1.171e-1338.32Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH9.909e-1342.05Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH2.883e-1246.43Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932937 ID=CK932937; Name=CK932937; organism=Citrus sinensis; type=EST; length=452bp
CTTCAACTTCCCTCCACTTCACTGGGCTTGCTCTGCTCATTCGCTTACTT
CCTCTCCCCGTTCTTCTGTCTTCATTCTTCAATGGCTAAAATGTCTTTGA
TTTTCAGTCTGTTTGTGGGTCTTTTAATGGTGGTTTTGGTCAGCTCAGCT
AAGTTTGATGATCTTTATCAAACAAGCTGGGCTTTTGATCATGTTCAGTA
TGATGGGGACACTCTCAAGCTTAACCTCGATAATTATTCCGGAGCTGGGT
TTGCGTCAAAGAGCAAGTATTTGTTTGGGAAAGTCTCCATCCAAATTAAA
CTTGTAGGGGGTGACTCTGCTGGAACTGTCACTGCCTTCTATATGTCATC
AGACGGTCCAAATCACAACGAGTTCTATTTTGAGTTCCTGGGGAACACTA
CAGGAGAGCCATACTTAGTCCAAACCAATGTTTATGTGAATGGTGTGGGC
AA
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