CK932940

Overview
NameCK932940
Unique NameCK932940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.154e-19
Identity = 47/113 (41.59%), Postives = 73/113 (64.60%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGAC-LRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R+++ E+  ++ RLS +L+  L  NLG+ +  L+NAF G N      +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K  +W+ V P KH+ +VN+G   +V
Sbjct:  117 RKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEV 229          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.507e-19
Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = -3
Query:   42 SIREVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 383
            S R V +EY K +  +  +L   LS+ LG+    L+ A GGD+I   L++N+YP CP+PDL LG+ +H+D   LT+L+P ++V GLQV K D WI  K   +A +++IG   ++
Sbjct:  154 SYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEI 266          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.571e-19
Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = -3
Query:   42 SIREVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 383
            S RE  +EY K L  +  +L + LS+ LG+    L+ A GGDN+   L++N+YP CP+PDL LG+ +H+D   +T+L+P + V GLQ  K   W  VK   +A +++IG   ++
Sbjct:  156 SYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVP-NDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEI 268          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.358e-19
Identity = 47/114 (41.23%), Postives = 72/114 (63.16%), Query Frame = -3
Query:   42 SIREVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 383
            S RE  +EY K +  +  R+ K+LS+ LG+    +  A GGD I   L++N+YP CP+PDL LG+ +H+D   +T+L+P ++V GLQV K  +W  VK   +A IV+IG   ++
Sbjct:  167 SYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVP-NEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEI 279          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.358e-19
Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = -3
Query:   57 VIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 371
            V  +Y ++L+ L+ +L+  LS  +G+ ++ L  A    ++   + VNFYPKCP+PDLTLGL  H+DPG +TLLL D QV GLQ  K  G  WITV+P + AF+VN+G
Sbjct:  159 VTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACV--DMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQD-QVGGLQATKDNGKTWITVQPVEGAFVVNLG 262          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.358e-19
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            REV+ ++ K L +L+  L+  L  NLG+ +  L+ AF G    N G   +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K   WI V P +H+ +VN+G   +V
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGT--KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.358e-19
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            REV+ ++ K L +L+  L+  L  NLG+ +  L+N F G    N G   +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K   WI V P +H+ +VN+G   +V
Sbjct:  111 REVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGT--KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.728e-19
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGAC-LRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            ++++ E+ K+L  L+  L+  L  NLG+ +  L+ AF G        +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K  NWI V P +HA +VN+G   +V
Sbjct:  111 KKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.480e-19
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = -3
Query:   57 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIG 377
            REV +EY   + +LS  L+  LS  LG+  D L+   GG+     +++N+YP CP+PDL LG+ +H+D  G+TLL+P ++V GLQV K D+W   +    A IV+IG
Sbjct:  156 REVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVP-NEVPGLQVFKDDHWFDAEYIPSAVIVHIG 261          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.480e-19
Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = -3
Query:   57 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 377
            R + + Y  EL+ L+ +L++ LS  +G+ ++ L  A    ++   + VN+YPKCPQP+LTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P + AF+VN+G
Sbjct:  155 RSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACV--DMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLG 260          
The following BLAST results are available for this feature:
BLAST of CK932940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ACCO_DIACA1.154e-1941.59Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
FLS_CITUN1.507e-1941.23Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FLS_MALDO2.571e-1939.47Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS_PETHY3.358e-1941.23Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FL3H_PETHY3.358e-1947.66Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCO3_PETHY3.358e-1941.741-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO2_SOLLC3.358e-1941.741-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_CUCME5.728e-1940.711-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
FLS1_ARATH7.480e-1942.99Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FL3H_PETCR7.480e-1945.87Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932940 ID=CK932940; Name=CK932940; organism=Citrus sinensis; type=EST; length=415bp
GGGGAAAAAAAAGACCATAAATTAGGAAGTAATAAATAACTCACCTGAAN
NNNNTCGCCAATGTTGACGATGAAAGCATGCTTGGCCGGCTTCACGGTGA
TCCAATTATCGCCTTTGCGGACTTGAAGACCGGTGACTTGATGGTCCGGC
AAGAGTAGGGTCAAGCCGCCGGGGTCCGAATGCGACGACAAGCCAAGTGT
TAAGTCGGGCTGCGGACACTTTGGATAAAAATTAACCCTCAAACAGGCTC
CAATATTATCACCACCAAATGCATTCTGTAATCGATCTTCGCTTATTCCA
AGATTAATCGATAAAGCCTTCATTAACCTCCCACTTAGTCGCACCAATTC
CTTGCAGTACTCATCAATCACCTCCCTAATTGAAACAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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