CK932940

Overview
NameCK932940
Unique NameCK932940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.480e-19
Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = -3
Query:   57 VIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 371
            V++ Y + L+ LS  LM  LS  +G+  + L  A    ++   + VNFYP+CPQPDLTLGL  H+DPG +TLLL D  V GLQ  +  G NWITV+P   AF+VN+G
Sbjct:  159 VVERYSERLMGLSCNLMGVLSEAMGLETEALAKACV--DMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQD-LVGGLQATRDGGKNWITVQPISGAFVVNLG 262          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.666e-18
Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R+V+ E+  +L  L+  L+  L  NLG+ +  L+ AF G    N G   +V+ YP CP+P+L  GL +H+D GG+ LL  D +V+GLQ+ K D WI V P +H+ ++N+G   +V
Sbjct:  111 RKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGT--KVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.176e-18
Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = -3
Query:   57 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 374
            +V +EY  +L+ L+  L+  LS  +G+  + L  A    ++   + VN+YPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P   AF+VN+G
Sbjct:  156 KVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVPGAFVVNLG 260          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.849e-18
Identity = 45/115 (39.13%), Postives = 70/115 (60.87%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R+ + E+  EL +L+ +L+  L  NLG+ +  L+ AF G    N G   +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K   W+ V P  H+ ++N+G   +V
Sbjct:  111 RKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGT--KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.849e-18
Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R+ + E+  EL +L+ +L+  L  NLG+ +  L+  F G    N G   +V+ YP CP+PDL  GL +HSD GG+ LL  D +V+GLQ+ K   W+ V P  H+ ++N+G   +V
Sbjct:  111 RKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGT--KVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.333e-18
Identity = 42/112 (37.50%), Postives = 68/112 (60.71%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R+ ++ Y  E+  ++  L+  ++  L I  + L+  F   +    +R+N+YP CPQPD  +GL+ HSD  GLT+L+  + V GLQ++K   W+ VKP  +AFIVNIG   ++
Sbjct:  168 RDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEI 279          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.333e-18
Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAF---GGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            REV+ ++ K L +L+  L+  L  NLG+ +  L+  F    G N G+  +V+ YP CP+PDL  GL +H+D GG+ LL  D +VTGLQ+ K   WI V P + + +VN+G   +V
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGS--KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.333e-18
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGAC-LRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R V+ E+  +L +L+ +L+  L  NLG+ +  L+ AF G N      +V+ YP CP P+L  GL +H+D GGL LL  D +V+GLQ+ K   WI V P +H+ ++N+G   +V
Sbjct:  111 RNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.271e-18
Identity = 43/115 (37.39%), Postives = 70/115 (60.87%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACL---RVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R+V+ E+ ++L +L+ +++  L  NLG+ +  L+ AF G   G      +V+ YP CP+P+L  GL +H+D GGL LL  D +V GLQ+ K   W+ V P  H+ ++N+G   +V
Sbjct:  110 RKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEV 224          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.271e-18
Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAF---GGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R V+ ++ + L +L+  L+  L  NLG+ +  L+ AF    G N G   +V  YP CP+ DL  GL +H+D GG+ LL  D +V+GLQ+ K D WI V P KH+ ++N+G   +V
Sbjct:  111 RRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGT--KVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEV 223          
The following BLAST results are available for this feature:
BLAST of CK932940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
FL3H_HORVU7.480e-1948.60Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
ACCO_PEA1.666e-1840.001-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
FL3H_DIACA2.176e-1847.22Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
ACCO2_MALDO4.849e-1839.131-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_MALDO4.849e-1839.131-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
SRG1_ARATH6.333e-1837.50Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
ACCO_TOBAC6.333e-1840.871-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_PRUMU6.333e-1839.821-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO_PERAE8.271e-1837.391-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_DIOKA8.271e-1840.001-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932940 ID=CK932940; Name=CK932940; organism=Citrus sinensis; type=EST; length=415bp
GGGGAAAAAAAAGACCATAAATTAGGAAGTAATAAATAACTCACCTGAAN
NNNNTCGCCAATGTTGACGATGAAAGCATGCTTGGCCGGCTTCACGGTGA
TCCAATTATCGCCTTTGCGGACTTGAAGACCGGTGACTTGATGGTCCGGC
AAGAGTAGGGTCAAGCCGCCGGGGTCCGAATGCGACGACAAGCCAAGTGT
TAAGTCGGGCTGCGGACACTTTGGATAAAAATTAACCCTCAAACAGGCTC
CAATATTATCACCACCAAATGCATTCTGTAATCGATCTTCGCTTATTCCA
AGATTAATCGATAAAGCCTTCATTAACCTCCCACTTAGTCGCACCAATTC
CTTGCAGTACTCATCAATCACCTCCCTAATTGAAACAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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