CK932940

Overview
NameCK932940
Unique NameCK932940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.080e-17
Identity = 43/113 (38.05%), Postives = 71/113 (62.83%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGAC-LRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R+ + E+ ++L +L+ +L+  L  N+G+ +  L+ AF G        +V+ YP CP+P+L  GL +H+D GG+ LL  D++V+GLQ+ K   WI V P KH+ ++NIG   +V
Sbjct:  111 RKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.411e-17
Identity = 45/115 (39.13%), Postives = 70/115 (60.87%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACL---RVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R  + E+ +EL +L+ RL+  L  +LG+ +  L+  F G + G      +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K   WI V P +++ +VNIG   +V
Sbjct:  113 RATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEV 227          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17
Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = -3
Query:   57 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIG 374
            +V  EYC+ +  LS ++M+ L ++LG+  D  +  F  ++  + +R+N+YP C +PDLTLG   H DP  LT+L  DH V GLQV   + W +++P   AF+VNIG
Sbjct:  185 KVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEEND--SIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDH-VNGLQVFVENQWRSIRPNPKAFVVNIG 287          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.842e-17
Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACL---RVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R  + E+  EL  L+ RL+  L  +LG+ +  L+  F G + G      +V+ YP CP+P+L  GL +H+D GG+ LL  D +V+GLQ+ K   WI V P +H+ +VNIG   +V
Sbjct:  113 RSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEV 227          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.143e-17
Identity = 42/108 (38.89%), Postives = 69/108 (63.89%), Query Frame = -3
Query:   42 EYCKELVRLSGRLMKALSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 362
            EY K+L  L+ +++  LSI LG+ + RL+   GG +++   +++NFYPKCPQP+L LG  +H+D   LT +L  + V GLQ+   D W+T K   ++ I++IG   ++
Sbjct:  177 EYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFIL-HNMVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEI 283          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17
Identity = 41/112 (36.61%), Postives = 70/112 (62.50%), Query Frame = -3
Query:   42 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 374
            E   EY K+L  L+ +++K LS+ LG+ E RL+   GG + +   +++N+YPKCPQP+L LG+ +H+D   LT +L  + V GLQ+     W+T K   ++ +++IG   ++
Sbjct:  171 EATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL-HNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEI 281          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17
Identity = 43/106 (40.57%), Postives = 66/106 (62.26%), Query Frame = -3
Query:   57 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIG 374
            +V  +YC+ +  LS ++M+ L ++LG++ D  +  F  ++  + +R+N YP C  PDLTLG   H DP  LT+L  DH V GLQV   + W +++P   AF+VNIG
Sbjct:  183 KVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEEND--SIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDH-VNGLQVFVDNQWQSIRPNPKAFVVNIG 285          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17
Identity = 45/116 (38.79%), Postives = 66/116 (56.90%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAF----GGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R ++  +  EL  L+ RL+  L  NLG+ +  L  AF    G    G   +V+ YP CP+PDL  GL +H+D GG+ LL  D +V GLQ+ K   W+ V P +H+ +VN+G   +V
Sbjct:  116 RRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGT--KVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEV 229          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17
Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAF----GGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R ++  +  EL  L+ RL+  L  NLG+ +  L  AF    G    G   +V+ YP CP+PDL  GL +H+D GG+ LL  D  V GLQ+ K   W+ V P +H+ +VN+G   +V
Sbjct:  116 RRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGT--KVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEV 229          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17
Identity = 42/113 (37.17%), Postives = 66/113 (58.41%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGAC-LRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R ++ ++  ++ +LS  L+  L  NLG+ +  L+  F G        +V+ YP CP PDL  GL +H+D GG+ LL  D +V+GLQ+ K   W+ V P KH+ +VN+G   +V
Sbjct:  111 RTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEV 223          
The following BLAST results are available for this feature:
BLAST of CK932940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ACCO_ACTDE1.080e-1738.051-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO2_DORSP1.411e-1739.131-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
GAOX1_ARATH1.842e-1741.51Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
ACCO1_DORSP1.842e-1739.131-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
LDOX_PERFR3.143e-1738.89Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_MALDO4.105e-1736.61Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
GAOX2_ARATH4.105e-1740.57Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
ACCO1_ORYSJ4.105e-1738.791-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI4.105e-1738.791-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ARATH5.361e-1737.171-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932940 ID=CK932940; Name=CK932940; organism=Citrus sinensis; type=EST; length=415bp
GGGGAAAAAAAAGACCATAAATTAGGAAGTAATAAATAACTCACCTGAAN
NNNNTCGCCAATGTTGACGATGAAAGCATGCTTGGCCGGCTTCACGGTGA
TCCAATTATCGCCTTTGCGGACTTGAAGACCGGTGACTTGATGGTCCGGC
AAGAGTAGGGTCAAGCCGCCGGGGTCCGAATGCGACGACAAGCCAAGTGT
TAAGTCGGGCTGCGGACACTTTGGATAAAAATTAACCCTCAAACAGGCTC
CAATATTATCACCACCAAATGCATTCTGTAATCGATCTTCGCTTATTCCA
AGATTAATCGATAAAGCCTTCATTAACCTCCCACTTAGTCGCACCAATTC
CTTGCAGTACTCATCAATCACCTCCCTAATTGAAACAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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