CK932940

Overview
NameCK932940
Unique NameCK932940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.001e-17
Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = -3
Query:   42 EYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACL---RVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 362
            E+   L +L+ RL+  L  NLG+ +  L+  F G + G      +V+ YP CP+P+L  GL +H+D GG+ LL  D  V+GLQ+ K + WI V P +H+ +VNIG   +V
Sbjct:  112 EFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEV 221          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.001e-17
Identity = 43/115 (37.39%), Postives = 68/115 (59.13%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            ++V+ E+  EL +L+  ++  L  NLG+ +  L+  F G    N G   +V+ YP CP+P+L  GL +H+D GGL LL  D +V+GL V K   W+ V P  H+ ++N+G   +V
Sbjct:  112 KKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGT--KVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEV 224          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16
Identity = 42/112 (37.50%), Postives = 68/112 (60.71%), Query Frame = -3
Query:   42 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 374
            E   EY K L  L+ ++ KALS+ LG+  DRL+   GG + +   +++N+YPKCPQP+L LG+ +H+D   LT +L  + V GLQ+     W+T K    + +++IG   ++
Sbjct:  167 EATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL-HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEI 277          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = -3
Query:   57 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLR------VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 377
            R   + Y ++L+ L  +L++ LS  +G+ +        GD   AC+       +N+YP CPQPDLTLG+  H+DPG +T+LL D  V GLQ  +  G  WITV+P + AF+VN+G
Sbjct:  155 RSTTEVYSEKLMVLGAKLLEVLSEAMGLEK--------GDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQD-MVGGLQATRDGGKTWITVQPVEGAFVVNLG 260          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16
Identity = 43/114 (37.72%), Postives = 66/114 (57.89%), Query Frame = -3
Query:   42 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACL---RVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 374
            E + EY +E+ +L+ ++M+ +  NLG  +  ++ AF GD         +V+ YP CP+ DL  GL +H+D GG+ LL  D QV GLQ+ K   WI V+P   A ++N G   +V
Sbjct:  110 ETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.037e-16
Identity = 40/108 (37.04%), Postives = 69/108 (63.89%), Query Frame = -3
Query:   42 EYCKELVRLSGRLMKALSINLGISEDRLQNAFGG-DNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 362
            EY K++  L+ +++  LSI LG+ E RL+   GG +++   +++N+YPKCPQP+L LG+ +H+D   LT +L  + V GLQ+     W+T K   ++ I++IG   ++
Sbjct:  175 EYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL-HNMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEI 281          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.661e-16
Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = -3
Query:   42 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 374
            E++ EY KE+++L   L + LS  LG++ + L++    +++   L  ++YP CPQPDLTLGL+ HSD   LT+LL DH + GLQV     W+ V P   A +VN+G   Q+
Sbjct:  176 EMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSL--LLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDH-IGGLQVLHDQYWVDVPPVPGALVVNVGDLLQL 283          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.475e-16
Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            RE  +EY K L  +   L K LS+ L +  +  ++  GGD++   +++N+YP CP+PDL LG+ +H+D   +T+L+P ++V GLQV K  +W   K   +A IV+IG   ++
Sbjct:  156 REANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGAGGDDLVYLMKINYYPPCPRPDLALGV-AHTDMSAITVLVP-NEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEI 265          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.475e-16
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            R+++ EY K+++ L   L + LS  LG+  + L +     + G  +  ++YP CP+PDLTLG S HSD   LT+LLPD Q+ GLQVR+  +W  V     A I+NIG   Q+
Sbjct:  178 RDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDM--DCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPD-QIEGLQVRREGHWFDVPHVSGALIINIGDLLQL 286          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.741e-16
Identity = 41/114 (35.96%), Postives = 69/114 (60.53%), Query Frame = -3
Query:   42 SIREVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 383
            S RE  +EY K L +++  + ++LS+ LG+    +  A G ++I   L++N+YP CP+PDL LG+ +H+D   +TLL+P+     +QV K  +W  V    +A IV+IG   ++
Sbjct:  171 SYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE----VQVFKDGHWYDVNYIPNAIIVHIGDQVEI 280          
The following BLAST results are available for this feature:
BLAST of CK932940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ACCO_DENCR7.001e-1740.001-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO3_CUCME7.001e-1737.391-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
LDOX_ARATH1.194e-1637.50Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FNSI_PETCR1.560e-1640.87Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
ACCO_MUSAC1.560e-1637.721-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
LDOX_PETHY2.037e-1637.04Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
ACCH1_ARATH2.661e-1641.441-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_EUSGR3.475e-1637.50Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
ACCH3_ARATH3.475e-1641.071-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_SOLTU7.741e-1635.96Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932940 ID=CK932940; Name=CK932940; organism=Citrus sinensis; type=EST; length=415bp
GGGGAAAAAAAAGACCATAAATTAGGAAGTAATAAATAACTCACCTGAAN
NNNNTCGCCAATGTTGACGATGAAAGCATGCTTGGCCGGCTTCACGGTGA
TCCAATTATCGCCTTTGCGGACTTGAAGACCGGTGACTTGATGGTCCGGC
AAGAGTAGGGTCAAGCCGCCGGGGTCCGAATGCGACGACAAGCCAAGTGT
TAAGTCGGGCTGCGGACACTTTGGATAAAAATTAACCCTCAAACAGGCTC
CAATATTATCACCACCAAATGCATTCTGTAATCGATCTTCGCTTATTCCA
AGATTAATCGATAAAGCCTTCATTAACCTCCCACTTAGTCGCACCAATTC
CTTGCAGTACTCATCAATCACCTCCCTAATTGAAACAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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