CK932940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.134e-13 Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = -3 Query: 42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLR-----VNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377 R+V+ EY K+++ L L + LS LG++ + L++ CL+ +++P CP+PDLT G S HSD LT+LLPD+ + GLQV + W V A I+NIG Q+ Sbjct: 178 RDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDM-------ECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDN-IEGLQVCREGYWFDVPHVPGALIINIGDLLQL 286
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 8.011e-13 Identity = 38/110 (34.55%), Postives = 68/110 (61.82%), Query Frame = -3 Query: 57 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIG---ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGD-NWITVKPAKHAFIVNIG 374 ++++EY + + +L+ +LM +LG+SE+ ++ A ++ A L++N YP CP+PD +GL++H+D LT+L + GLQV + D W+TV P + +VN+G Sbjct: 165 DIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILY-QNNTAGLQVFRDDLGWVTVPPFPGSLVVNVG 273
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12 Identity = 42/113 (37.17%), Postives = 68/113 (60.18%), Query Frame = -3 Query: 57 VIDEYCKELVRLSGRLMKALSINLGISEDRLQNAF----GGDNIG-ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQ--VTGLQV-RKGDNWITVKPAKHAFIVNIG 371 +I EY E+ +L+ RL+ + +LG++ + ++ A G +G +R+N YP CP+P+ +GL++H+D LT+L HQ GLQV R+ W+TV+PA +VNIG Sbjct: 159 IIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTIL---HQSNTGGLQVFREESGWVTVEPAPGVLVVNIG 268
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.785e-12 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = -3 Query: 42 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 374 E + ++ K++ +L L++ LS LG+ L++ D N+YP CPQP+LT+G H+D G +T+LL D + GLQV ++W+ V P + +VNIG Q+ Sbjct: 174 ESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYM--DCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQD-DMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQL 281
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.331e-12 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = -3 Query: 57 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIG 377 REV +EY + + LS ++M+ LS LG+ + ++ G + + +N YP P D GL H+D GLTL++ + ++ GLQV K D+WI V+ A IVNIG Sbjct: 113 REVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEVNGCWYV---MNINHYPPYPHSDSFNGLEPHTDINGLTLIITN-EIPGLQVFKDDHWIEVEYIPSAIIVNIG 215
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.044e-12 Identity = 38/110 (34.55%), Postives = 65/110 (59.09%), Query Frame = -3 Query: 57 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIG---ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGD-NWITVKPAKHAFIVNIG 374 E+I+EY + + +L+ +LM +LG+ E +Q A + A +++N YPKCP+PD +GL++H+D +T+L + GLQV + D W+T P + +VN+G Sbjct: 158 EIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILY-QNNTAGLQVFRDDVGWVTAPPVPGSLVVNVG 266
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.511e-11 Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = -3 Query: 42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377 R+++ +Y + L L + LS LG+ + L+ + G L ++YP CPQP+LT G S HSD G LT+L+ D Q+ GLQ+ + WI V A ++NI Q+ Sbjct: 205 RDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAE--GLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQD-QIGGLQILLENQWIDVPFIPGALVINIADLLQL 313
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.396e-11 Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = -3 Query: 42 VIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIG----ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQV-RKG-DNWITVKPAKHAFIVNIGXXXQV 371 V++E+ +E+ L+ +L++ + LG++ +++ I A + +N+YPKCP P LGL +H+D G T +L V GLQ+ R G D W+TV A +VN+G Q+ Sbjct: 162 VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVL-QSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQI 276
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.396e-11 Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = -3 Query: 42 VIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIG----ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQV-RKG-DNWITVKPAKHAFIVNIGXXXQV 371 V++E+ +E+ L+ +L++ + LG++ +++ I A + +N+YPKCP P LGL +H+D G T +L V GLQ+ R G D W+TV A +VN+G Q+ Sbjct: 162 VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVL-QSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQI 276
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.741e-11 Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = -3 Query: 42 VIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIG----ACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQV-RKG-DNWITVKPAKHAFIVNIGXXXQV 371 V++E+ +E+ L+ +L++ + LG++ +++ I A + +N+YPKCP P LGL +H+D G T +L V GLQ+ R G D W+TV A +VN+G Q+ Sbjct: 162 VMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVL-QSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQI 276 The following BLAST results are available for this feature:
BLAST of CK932940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932940 ID=CK932940; Name=CK932940; organism=Citrus sinensis; type=EST; length=415bpback to top |