CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LISMF (Bifunctional protein folD OS=Listeria monocytogenes serotype 4b (strain F2365) GN=folD PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.059e-63
Identity = 132/241 (54.77%), Postives = 173/241 (71.78%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  D++ K  G
Sbjct:    4 IIDGKKLAKEIQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLIENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVVIDVGMDR-DENNKLCG 240          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LISW6 (Bifunctional protein folD OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=folD PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.171e-62
Identity = 130/241 (53.94%), Postives = 171/241 (70.95%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            IIDG+ +A+ I+  +  EV  L+ K  K PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE VSE +L+  V ELN    +HGILVQLPLPKHI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T +   + +EADI++ A G A  +K  +IKPGA VIDVG +  D++ K  G
Sbjct:    4 IIDGEKLAKEIQERVTTEVAELA-KIDKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPETVSEEKLLEVVEELNTDDTIHGILVQLPLPKHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKNLPEVAKEADILVVATGLAKFVKKEYIKPGAIVIDVGMDR-DENNKLCG 240          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LARHH (Bifunctional protein folD OS=Laribacter hongkongensis (strain HLHK9) GN=folD PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.171e-62
Identity = 120/237 (50.63%), Postives = 164/237 (69.20%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A +IDGK ++  +   +A  V+  +E   + P LAV++VG    S+ YV  K+K C + GI+S   DLPE  SEA+L++ V ELNA  DV GILVQLPLP+HIN E V+  I+ +KDVDGFHP N+G+LA+K   PL  PCTP+G + +L+ +G++++GK AVV+G+SNIVG P++L LL   ATVTI HS T D    V+ ADI++AA G    +KG W+KPGA VIDVG N ++D
Sbjct:    3 AQLIDGKTISAALLDRVAAGVKARTEAGKRAPALAVILVGNNPASEVYVRNKKKGCEKAGIQSLAYDLPESTSEADLLALVDELNARSDVDGILVQLPLPRHINPETVIERINPKKDVDGFHPYNMGRLAVK--MPLLRPCTPRGVMIMLEHAGISVEGKHAVVIGQSNIVGRPMALELLMERATVTICHSRTRDLPEEVKRADIIVAAVGIPRFVKGDWVKPGAVVIDVGINRLED 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: C1TC_YEAST (C-1-tetrahydrofolate synthase, cytoplasmic OS=Saccharomyces cerevisiae GN=ADE3 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.608e-62
Identity = 126/252 (50.00%), Postives = 164/252 (65.08%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKP--------GAAVIDVGTNAVDDSTKKSGYR 792
            ++DGKA AQ  RS IA E++ +     G  P LA++ VG R DS +YV MKRKA  E GI +  I L E  +E E++  V +LN  P  HGI+VQLPLP H++E+++   +  EKDVDGF P NIG+L  K   P FLPCTPKG +ELL ++ VTI+G R+VV+GRS+IVG PV+ LL   ++TVTI HS T D  S + +ADIV+ A GQ   +KG W KP           VIDVGTN V D +KKSG++
Sbjct:    5 VLDGKACAQQFRSNIANEIKSIQGHVPGFAPNLAIIQVGNRPDSATYVRMKRKAAEEAGIVANFIHLDESATEFEVLRYVDQLNEDPHTHGIIVQLPLPAHLDEDRITSRVLAEKDVDGFGPTNIGELNKKNGHPFFLPCTPKGIIELLHKANVTIEGSRSVVIGRSDIVGSPVAELLKSLNSTVTITHSKTRDIASYLHDADIVVVAIGQPEFVKGEWFKPRDGTSSDKKTVVIDVGTNYVADPSKKSGFK 256          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PARL1 (Bifunctional protein folD OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=folD PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.406e-62
Identity = 122/243 (50.21%), Postives = 162/243 (66.67%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            ATIIDGK +A  +R+ +A EV  L + +   PGLAVV+VG    S+ YV  K  A  E G+ SF+  LP + SEA++++KV ELNA P VHG LVQ P+P HI+++ V+  I   KD DG HPLN G+LA     P  +P TP+GC+ + KR+G  + GK AV++GRSN+VG PV+ LLLK + TVTI HS + D  SI R+ADI++AA G+  M++G W+KPGA VIDVG N V    K  G
Sbjct:    3 ATIIDGKIIATELRARVAVEVARLKKDHSLTPGLAVVLVGNDPASEVYVRNKGIATTEAGMNSFEFKLPAETSEADVLAKVRELNADPAVHGFLVQFPVPNHISQQAVIDAIDPVKDADGLHPLNAGRLA--SGLPAMVPATPEGCVIMAKRAGGDLSGKHAVIIGRSNLVGKPVAQLLLKENCTVTIAHSRSRDLPSIARQADILVAAVGRPGMVRGDWVKPGAVVIDVGINRVPAPEKGEG 243          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOSL (Bifunctional protein folD 2 OS=Geobacter sulfurreducens GN=folD2 PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.911e-62
Identity = 128/237 (54.01%), Postives = 165/237 (69.62%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            ATIIDGKA+A+ IR+++A +V+ L  + G  PGLA V+VG    S+ YV MK  AC ++G+ S  I  P + +E EL++ ++ELN  P +HGILVQLPLP  IN ++VL  IS  KDVDGFHP N+G+L + G+ P F PCTP G + +L+ +GV + GK  VVVGRSNIVG PV+L+ L+ +ATVTI HS T D    VR AD+VIAA G   MIKG WIK GA VIDVG N V +
Sbjct:    2 ATIIDGKAIAEKIRADLAAQVKELQSR-GITPGLATVLVGSDPASEVYVRMKGDACNKLGMHSVKITRPAETTEEELLALINELNNDPAIHGILVQLPLPPQINADRVLEAISPAKDVDGFHPYNVGRL-VTGK-PTFQPCTPYGVMVMLQEAGVDLAGKEVVVVGRSNIVGKPVALMCLQRNATVTICHSKTRDLPGRVRAADVVIAAVGVPEMIKGDWIKEGAVVIDVGVNRVGE 235          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: C1TC_DROME (C-1-tetrahydrofolate synthase, cytoplasmic OS=Drosophila melanogaster GN=pug PE=1 SV=4)

HSP 1 Score: 236.498 bits (602), Expect = 1.294e-61
Identity = 128/246 (52.03%), Postives = 167/246 (67.89%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGK-VPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLP--KHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A II G AVA++IR E+  EV  +S++    VPGL +V VGGR+DS  Y+ MK KA  E+GI +  + LP  ++E EL+ K+++LN  P VHGI+VQ+PL     I+  ++   +S EKDVDG H +N G+LA+ G    FLPCTP GCLEL++RSGV I G RAVV+GRS IVG P + LL  A+ATVT+ HS T + E I R ADI++   G A M+KGSWIKPGA VID G N   D++K SG
Sbjct:   38 AKIISGTAVAKSIREELRNEVTAMSKQLADFVPGLRIVQVGGREDSNVYIRMKIKAATEIGIDAAHVQLPRSITEVELLDKINDLNEDPRVHGIIVQMPLDCDTPIDSHRITDAVSPEKDVDGLHTVNEGRLAI-GDLGGFLPCTPWGCLELIRRSGVEIAGARAVVLGRSKIVGTPAAELLKWANATVTVCHSKTRNLEEITRSADILVVGIGVAEMVKGSWIKPGAVVIDCGINVKPDASKASG 282          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_MOOTA (Bifunctional protein folD OS=Moorella thermoacetica (strain ATCC 39073) GN=folD PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.691e-61
Identity = 129/237 (54.43%), Postives = 163/237 (68.78%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A I+DGK +A  +R+E+ EEV  L  + G  PGLAVV+VG    SQ YV  K +AC EVGI S    LP   S+AEL+  + +LN  P +HGILVQLPLP HI+E+KV+  I+LEKDVDGF P N+G L +   D  F PCTP GC+ LL+++G+  KGK+AVVVGRSNIVG PV+++LL   ATVTI HS T D  +  R+ADI+IAA G+  +I G  IK GA VIDVG N V +
Sbjct:    3 AQILDGKKIAAEVRAEVKEEVSRLKAE-GINPGLAVVLVGEDPASQVYVRNKHRACEEVGIYSEVHRLPAATSQAELLKLIDQLNKDPKIHGILVQLPLPDHIDEKKVIDAIALEKDVDGFSPANVGNLVIG--DKCFYPCTPHGCMVLLEKAGIDPKGKKAVVVGRSNIVGKPVAMMLLARHATVTICHSRTRDLAAECRQADILIAAVGKPELITGDMIKEGAVVIDVGINRVGE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LYSSC (Bifunctional protein folD OS=Lysinibacillus sphaericus (strain C3-41) GN=folD PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.884e-61
Identity = 126/243 (51.85%), Postives = 172/243 (70.78%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            + II+GK + Q IR+ +AE V  L E+ G  PGLAVV+VG  + S +YV  K+K+C  +G+ S  I LPE+  + EL++++ +LN   D+HGILVQLPLPKHI+E+ V+  I++EKDVDGF P+++GK+ M G++  FLPCTP G ++LL+ SG+ I GK AV+VGRS+IVG P+  LLL+ DATVT  HS TPD  S  ++ADI+IAA G+A  I    +K GA VIDVG N  DD+ K  G
Sbjct:    3 SAIINGKEIGQEIRNAVAERVIRLKEQ-GLTPGLAVVLVGDNQASATYVRNKQKSCEAIGMYSELIKLPEETKQEELLTQIQQLNQREDIHGILVQLPLPKHIDEDTVIATIAVEKDVDGFSPVSVGKM-MLGQE-TFLPCTPFGVMKLLEYSGIEIAGKHAVIVGRSHIVGKPMGQLLLQKDATVTYTHSKTPDLPSFTKQADILIAAVGRANFITKEHVKEGAVVIDVGINR-DDNNKLCG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_CLOTH (Bifunctional protein folD OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=folD PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.766e-61
Identity = 123/238 (51.68%), Postives = 167/238 (70.17%), Query Frame = 1
Query:   55 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            +A +++GK ++  I+ E+  EV  L +K    PGLAV+IVG    S+ YV+ K+KACAE+GI+SF+  L E  ++ ELI  +H+LN    V GILVQLPLPKHI+EEKV+  I   KDVD FHP+N+GKL +   +P FLPCTP G +EL+K SG+ I GK  VVVGRSNIVG P+++LLL  + TVT+ HS T + + + + ADI++ A G+   IKGS IKPGA VIDVG N +++
Sbjct:    2 EAKVLNGKELSTKIKEELKIEVEDL-KKNNINPGLAVIIVGNDPASRVYVNSKKKACAEIGIESFEYALEENTTQEELIELIHKLNKDDKVSGILVQLPLPKHIDEEKVIYAIDPSKDVDAFHPVNVGKLMI--GNPDFLPCTPAGVMELIKESGIDITGKECVVVGRSNIVGKPMAMLLLAQNGTVTVCHSRTQNIDEVCKRADILVVAVGKPEFIKGSSIKPGAVVIDVGINRLEN 236          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_LISMF1.059e-6354.77Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISW61.171e-6253.94Bifunctional protein folD OS=Listeria welshimeri s... [more]
FOLD_LARHH1.171e-6250.63Bifunctional protein folD OS=Laribacter hongkongen... [more]
C1TC_YEAST2.608e-6250.00C-1-tetrahydrofolate synthase, cytoplasmic OS=Sacc... [more]
FOLD_PARL13.406e-6250.21Bifunctional protein folD OS=Parvibaculum lavament... [more]
FOLD2_GEOSL9.911e-6254.01Bifunctional protein folD 2 OS=Geobacter sulfurred... [more]
C1TC_DROME1.294e-6152.03C-1-tetrahydrofolate synthase, cytoplasmic OS=Dros... [more]
FOLD_MOOTA1.691e-6154.43Bifunctional protein folD OS=Moorella thermoacetic... [more]
FOLD_LYSSC2.884e-6151.85Bifunctional protein folD OS=Lysinibacillus sphaer... [more]
FOLD_CLOTH3.766e-6151.68Bifunctional protein folD OS=Clostridium thermocel... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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