CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ANADE (Bifunctional protein folD OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 122/235 (51.91%), Postives = 158/235 (67.23%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            +IDGK +A  ++ E+A EVR L+ + G   GL VV VG    S  YV  KRK C EVGI S +  LP   ++AEL++ +  LNA P VHGILVQLPLPKH++E  VL  IS  KD DGFHP N+G L++ G   +  PCTP G + +L  + V  KGKRA+VVGRSNIVG P++++LL+  ATVTI HS T D    V  ADI++AA G+A ++KG+W+K GA VIDVG N + D
Sbjct:    3 LIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPVTTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSI-GIAGVPRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLAD 235          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ACIBL (Bifunctional protein folD OS=Acidobacteria bacterium (strain Ellin345) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 120/237 (50.63%), Postives = 160/237 (67.51%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            ATI+DG  ++  I++E+A EV  L  K G  PGLAVV+VG    S+ YV  K KAC   GI S     P+ VS A+L+  V  LN   D+ GILVQLPLPK ++ +K+L  +S EKDVDGFHP+N+G L+     P  +PCTP GC+E+L+RS V ++G  AVVVGRS+IVG P+++LL  A+ATVTI HS T D  ++ R ADI++AA G+  MI   ++KPGA V+DVG N + D
Sbjct:    3 ATILDGNKISAEIKTEVAAEVAELKAK-GLTPGLAVVLVGHNPASEIYVRNKVKACEMTGIYSEQHTPPDTVSTADLLQLVESLNRRNDIDGILVQLPLPKQVDSKKILLAVSPEKDVDGFHPMNVGYLSTVR--PGLVPCTPAGCMEILRRSNVPVEGADAVVVGRSDIVGKPIAMLLTNANATVTICHSKTHDLPAVCRRADILVAAIGRPGMITPDFVKPGATVLDVGINKITD 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PHOPO (Bifunctional protein folD OS=Photobacterium phosphoreum GN=folD PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.682e-58
Identity = 118/237 (49.79%), Postives = 154/237 (64.98%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A IIDGK ++QT+R E+A  V+  ++   + PGLAVV+VG    SQ YV  KRKAC EVG  S   DLP   SE +L+  + ELN  P + GILVQLPLP  ++  ++L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L LL A AT T  H  T D E  +R+ADI++ A G+   I G WIK GA VIDVG N +++
Sbjct:    3 AQIIDGKIISQTVRQEVAARVKARTDAGLRAPGLAVVLVGQDPASQIYVGSKRKACEEVGFISKSFDLPSSASEQQLLDLIDELNQDPTMDGILVQLPLPAGMDCTRILERIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLERYNIEVRGKHAVIVGASNIVGRPMTLELLLAGATTTTCHRFTQDLEGHIRQADILVVAVGKPNFIPGGWIKEGATVIDVGINRLEN 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_NEIMA (Bifunctional protein folD OS=Neisseria meningitidis serogroup A GN=folD PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.682e-58
Identity = 123/239 (51.46%), Postives = 156/239 (65.27%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A +I+GK V+Q     +AE V    +    +P LAVV+VGG   S  YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +
Sbjct:    3 AQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGDPASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLDDGS 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_NEIM0 (Bifunctional protein folD OS=Neisseria meningitidis serogroup C (strain 053442) GN=folD PE=3 SV=2)

HSP 1 Score: 223.787 bits (569), Expect = 8.682e-58
Identity = 123/239 (51.46%), Postives = 156/239 (65.27%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A +I+GK V+Q     +AE V    +    +P LAVV+VGG   S  YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + VL  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +
Sbjct:    3 AQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGDPASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAVLERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKGEWIKPGAVVIDVGINRLDDGS 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ALHEH (Bifunctional protein folD OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=folD PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.682e-58
Identity = 112/236 (47.46%), Postives = 161/236 (68.22%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A I+DGKA+A  +R ++ ++V    E+ G+ PGLAVV+VG    S  YV  KR+AC ++G+ S   +LP + ++ EL++ V ELN   ++ GILVQLPLP HI+E+ V+  I  +KDVDGFHP+N+G+L +  R P   PCTP G + +L  +G+ ++GK AV++G+SNIVG P+++ LL A  T+TI HS T +    VR ADIV+AA G+   + G WIKPGA VIDVG N ++
Sbjct:    3 AQILDGKAIAAELREQVRKQVEARVERGGRRPGLAVVLVGADPASTVYVGKKRQACEQLGMHSSAHELPAETTQDELLALVDELNGRDEIDGILVQLPLPDHIDEQTVIDRIHPDKDVDGFHPVNMGRLTL--RLPGLRPCTPNGVMTMLAHAGIELEGKDAVIIGQSNIVGRPMAMELLNARCTITICHSRTRNLADRVRAADIVVAAVGRPGFVPGDWIKPGAVVIDVGINRLE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ACTP2 (Bifunctional protein folD OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=folD PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.682e-58
Identity = 120/236 (50.85%), Postives = 157/236 (66.53%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A II G AVA+ +++ IAE+++  + +  + PGLAV++VG    SQ YV+ KRK+CAE+GI+S   DLP +  EAEL++ + +LN    V GILVQLPLPK I+  KV   I   KDVDGFHP N+G+L  K   P    CTP G ++LL+ +GV + G  AVVVG SNIVG P+++ LL A  TVTI HS T D    V +ADIV+A  G+   +KG WIKPGA VIDVG N V+
Sbjct:    3 AHIISGTAVAKQVKANIAEQIQAYTAQDKRKPGLAVILVGMDPASQVYVNSKRKSCAEIGIESKSYDLPAETGEAELLAIIEQLNHDDSVDGILVQLPLPKQIDATKVTEAIVPHKDVDGFHPYNVGRLCQK--IPTLRSCTPYGVMKLLESTGVNLAGLHAVVVGASNIVGRPMAMELLLAGCTVTITHSRTKDLAYHVSQADIVVAGVGKPNFVKGEWIKPGAIVIDVGINRVE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEPA (Bifunctional protein folD OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=folD PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.134e-57
Identity = 122/233 (52.36%), Postives = 150/233 (64.38%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            IDGKA+AQ+IR+++ ++V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    SE  L+S + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + LLK +GV   G  AVVVG SNIVG P+SL LL A  T T  H  T + E  VR AD+V+ A G+   I G WIKPGA VIDVG N ++
Sbjct:    6 IDGKAIAQSIRTQLKDKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDSSTSEDALLSLIDECNEDPTIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLLKSTGVDTFGLDAVVVGASNIVGRPMSLELLLAGCTTTTCHRFTRNLEDKVRSADLVVVAVGKPGFIPGDWIKPGAIVIDVGINRLE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEHH (Bifunctional protein folD OS=Shewanella halifaxensis (strain HAW-EB4) GN=folD PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.134e-57
Identity = 119/236 (50.42%), Postives = 152/236 (64.41%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A IIDGKA+AQTIR+++ ++V    E   + PGLAV++VG    SQ YV  KR+AC EVG  S   DL    SE  L+S + E N  P + GILVQLPLP+HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVV+G SNIVG P++L LL    T TI H  T + E  VR+AD+++ A G+   I G WIKPGA VIDVG N ++
Sbjct:    3 AQIIDGKAIAQTIRTQLKDKVTARKEAGQRAPGLAVILVGADPASQVYVGSKRRACEEVGFISRSYDLDSSTSEEALLSLIDECNEDPSIDGILVQLPLPEHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRACTPMGIMTLIKSTGVDTFGLDAVVIGASNIVGRPMALELLLTGCTTTICHRFTRNLEDKVRQADLLVVAVGKPGFIPGDWIKPGAIVIDVGINRLE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_RHOSK (Bifunctional protein folD OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=folD PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.134e-57
Identity = 124/242 (51.24%), Postives = 156/242 (64.46%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAV--DDSTKKSG 786
            IDGKA A  +R+ +AEEV  L E +G VPGLAVV+VG    SQ YV  K K   EVG+ SF+  LP   SEAEL++ +  LN  P VHGILVQLPLP H+N + V+  +   KDVDGFH  N+G+L    +    +PCTP GCL +L+    T+ G  AVVVGRSNIVG P++ LLL    TVT+ HS T D  ++ R ADI++AA G+  MI G ++KPGA VIDVG N +  D  TK  G
Sbjct:    6 IDGKAFAAGVRARVAEEVARLKEGHGIVPGLAVVLVGEDPASQVYVGAKGKQTVEVGMTSFEHRLPAGTSEAELLALIDRLNHDPAVHGILVQLPLPAHLNADLVINALDPAKDVDGFHISNVGRLGTGQKS--MVPCTPLGCLMMLRDHLGTLSGLNAVVVGRSNIVGKPMAQLLLGESCTVTVAHSRTRDLAAVCRGADILVAAVGRPEMITGDFVKPGATVIDVGINRIERDGKTKLVG 245          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_ANADE6.648e-5851.91Bifunctional protein folD OS=Anaeromyxobacter deha... [more]
FOLD_ACIBL6.648e-5850.63Bifunctional protein folD OS=Acidobacteria bacteri... [more]
FOLD_PHOPO8.682e-5849.79Bifunctional protein folD OS=Photobacterium phosph... [more]
FOLD_NEIMA8.682e-5851.46Bifunctional protein folD OS=Neisseria meningitidi... [more]
FOLD_NEIM08.682e-5851.46Bifunctional protein folD OS=Neisseria meningitidi... [more]
FOLD_ALHEH8.682e-5847.46Bifunctional protein folD OS=Alkalilimnicola ehrli... [more]
FOLD_ACTP28.682e-5850.85Bifunctional protein folD OS=Actinobacillus pleuro... [more]
FOLD_SHEPA1.134e-5752.36Bifunctional protein folD OS=Shewanella pealeana (... [more]
FOLD_SHEHH1.134e-5750.42Bifunctional protein folD OS=Shewanella halifaxens... [more]
FOLD_RHOSK1.134e-5751.24Bifunctional protein folD OS=Rhodobacter sphaeroid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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