CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_HAEIG (Bifunctional protein folD OS=Haemophilus influenzae (strain PittGG) GN=folD PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.934e-57
Identity = 116/236 (49.15%), Postives = 159/236 (67.37%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A II G  +++ I++ +A+++    E+  +VPGLAV++VG    SQ YV  KRK+C EVGI S   DLPE  ++ EL++ + +LNA  ++ GILVQLPLPK IN E ++  I  +KDVDGFHP N+G+L    R P    CTP G ++LL+ +G+ + GK AV+VG SNIVG P+SL LL A ATVT+ H  T + E+ VR+ADI++ A G+  +I G WIK  A VIDVG N VD
Sbjct:    3 AKIISGTELSKQIKANLADKITHYIEQGKRVPGLAVILVGADPASQIYVGNKRKSCEEVGILSKSYDLPETTTQNELLAIIDQLNADKNIDGILVQLPLPKQINAEAIIEHIDPKKDVDGFHPYNVGRLCQ--RIPTLRACTPYGVMKLLETTGIDLHGKHAVIVGASNIVGRPMSLELLLAGATVTVTHRFTKNLENHVRQADILVVAVGKPNLISGDWIKESAVVIDVGINRVD 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_WOLPM (Bifunctional protein folD OS=Wolbachia pipientis wMel GN=folD PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 113/234 (48.29%), Postives = 153/234 (65.38%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            IIDGK +A  +   +++++ +L  +Y   P L V+++G    SQ YV  K+K    +GI S  I LP  + E ELI K++ELN  P VHGILVQLPLP HI+  +V+  +S+EKDVDGFH  N+GKL +KG     +PCTPKG L L+K     + GK AVV+GRSNIVG P+  LLL+ + TVTI+HS + D      +ADIV+AA G+   ++  WIK GA VIDVG N+V+
Sbjct:    4 IIDGKKIANDLCERLSQKIDILKREYNIFPCLKVILIGSNPASQVYVRNKQKKAESIGISSETIVLPNNILEDELIEKINELNEDPSVHGILVQLPLPNHISASRVINTVSVEKDVDGFHDENVGKL-VKGEKNCLIPCTPKGSLHLIKSIEENLSGKNAVVIGRSNIVGKPMFYLLLQENCTVTILHSQSKDLAEYCSKADIVVAAVGKPNFVQADWIKKGAIVIDVGINSVN 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_VIBCH (Bifunctional protein folD OS=Vibrio cholerae GN=folD PE=3 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 119/233 (51.07%), Postives = 150/233 (64.38%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            IDG  ++QT+RSE+A  V+   +   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE  L+S V ELN  P + GILVQLPLP  ++  KVL  I  EKDVDGFHP N+G+LA   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L LL A  T T  H  T D E  +R+ADI++ A G+   I G+WIK GA V+DVG N +D
Sbjct:    6 IDGTLISQTVRSEVAARVKARVQAGLRAPGLAVVLVGEDPASQVYVGSKRRACEEVGFVSKSFDLPATASEEALLSLVEELNNDPQIDGILVQLPLPAGMDTTKVLESIHPEKDVDGFHPYNVGRLAQ--RIPKLRSCTPKGIITLLERYNIPLRGKHAVIVGASNIVGRPMTLELLLAGCTTTTCHRFTQDLEGHIRQADILVVAVGKPNFIPGAWIKEGAVVVDVGINRLD 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_VIBC3 (Bifunctional protein folD OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=folD PE=3 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 119/233 (51.07%), Postives = 150/233 (64.38%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            IDG  ++QT+RSE+A  V+   +   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE  L+S V ELN  P + GILVQLPLP  ++  KVL  I  EKDVDGFHP N+G+LA   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L LL A  T T  H  T D E  +R+ADI++ A G+   I G+WIK GA V+DVG N +D
Sbjct:    6 IDGTLISQTVRSEVAARVKARVQAGLRAPGLAVVLVGEDPASQVYVGSKRRACEEVGFVSKSFDLPATASEEALLSLVEELNNDPQIDGILVQLPLPAGMDTTKVLESIHPEKDVDGFHPYNVGRLAQ--RIPKLRSCTPKGIITLLERYNIPLRGKHAVIVGASNIVGRPMTLELLLAGCTTTTCHRFTQDLEGHIRQADILVVAVGKPNFIPGAWIKEGAVVVDVGINRLD 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_STRA5 (Bifunctional protein folD OS=Streptococcus agalactiae serotype V GN=folD PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 113/241 (46.89%), Postives = 163/241 (67.63%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            +IDGKA++Q +++E+  +V  L E++G +PGLAV++VG    SQ YV  K ++  E G KS  + L E +S+ ELI  +H+ N    +HGILVQLPLP+HIN++K++  I  +KDVDGFHP+N G L   GR P+ +PCTP G +E+ +   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T +   + +EADI+I A GQ   +   ++K GA VIDVG N  D++ K  G
Sbjct:    4 LIDGKALSQKMQAELGRKVERLKEQHGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGMNR-DENGKLIG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_STRA3 (Bifunctional protein folD OS=Streptococcus agalactiae serotype III GN=folD PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 113/241 (46.89%), Postives = 163/241 (67.63%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            +IDGKA++Q +++E+  +V  L E++G +PGLAV++VG    SQ YV  K ++  E G KS  + L E +S+ ELI  +H+ N    +HGILVQLPLP+HIN++K++  I  +KDVDGFHP+N G L   GR P+ +PCTP G +E+ +   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T +   + +EADI+I A GQ   +   ++K GA VIDVG N  D++ K  G
Sbjct:    4 LIDGKALSQKMQAELGRKVERLKEQHGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGMNR-DENGKLIG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_STRA1 (Bifunctional protein folD OS=Streptococcus agalactiae serotype Ia GN=folD PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 113/241 (46.89%), Postives = 163/241 (67.63%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            +IDGKA++Q +++E+  +V  L E++G +PGLAV++VG    SQ YV  K ++  E G KS  + L E +S+ ELI  +H+ N    +HGILVQLPLP+HIN++K++  I  +KDVDGFHP+N G L   GR P+ +PCTP G +E+ +   V ++GK AV++GRSNIVG P++ LLL  +ATVT+ HS T +   + +EADI+I A GQ   +   ++K GA VIDVG N  D++ K  G
Sbjct:    4 LIDGKALSQKMQAELGRKVERLKEQHGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQHINDKKIILAIDPKKDVDGFHPMNTGHL-WSGR-PMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGMNR-DENGKLIG 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG2 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain NCCP11945) GN=folD PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 122/239 (51.05%), Postives = 154/239 (64.44%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A +I+GK V+Q     IAE V    +     P LAVV+VGG      YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + +L  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +
Sbjct:    3 AQLINGKEVSQKHLQAIAEAVAQRQQDNLHTPCLAVVLVGGDPAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAILERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKGGWIKPGAVVIDVGINRLDDGS 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_NEIG1 (Bifunctional protein folD OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=folD PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 122/239 (51.05%), Postives = 154/239 (64.44%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A +I+GK V+Q     IAE V    +     P LAVV+VGG      YV  K+ AC + GIKS   +LPE  S+ EL++ V  LNA  +V GILVQLPLPKH++ + +L  IS +KDVDGFHP N+G+LA+K   PL  PCTPKG + LL+  G+  KGK+AVVVG SNIVG P +L LL A ATVT+ HS T +    V  ADI++   G    +KG WIKPGA VIDVG N +DD +
Sbjct:    3 AQLINGKEVSQKHLQAIAEAVAQRQQDNLHTPCLAVVLVGGDPAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLPKHLDSQAILERISPDKDVDGFHPYNVGRLAVK--MPLMRPCTPKGVMTLLEAYGIDPKGKKAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKGGWIKPGAVVIDVGINRLDDGS 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: C1TC_RAT (C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus GN=Mthfd1 PE=1 SV=3)

HSP 1 Score: 222.246 bits (565), Expect = 2.526e-57
Identity = 122/246 (49.59%), Postives = 157/246 (63.82%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKY-GKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKH--INEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A I++GK V+  IR+ +  +V  + E+  G  PGLA++ VG R DS  Y+++K KA  E+GIK+  I LP   +E+E++  V  LN    VHG +VQLPL     IN E V+  I+ EKDVDG   +N GKLA       F+PCTPKGCLEL+K +GV I G+ AVVVGRS IVG P+  LLL  +ATVT  HS T D +  V + DI++ A GQ  M+KG WIKPGA VID G N V D TK +G
Sbjct:    4 AGILNGKVVSAQIRNRLKTQVTQMQEQVPGFTPGLAILQVGDRDDSNLYINVKLKAAQEIGIKATHIKLPRTSTESEVLKYVISLNEDATVHGFIVQLPLDSENSINTEAVINAIAPEKDVDGLTSINAGKLARGDLKDCFIPCTPKGCLELIKETGVQIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTADLDKEVNKGDILVVATGQPEMVKGEWIKPGAVVIDCGINYVPDDTKPNG 249          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_HAEIG1.934e-5749.15Bifunctional protein folD OS=Haemophilus influenza... [more]
FOLD_WOLPM2.526e-5748.29Bifunctional protein folD OS=Wolbachia pipientis w... [more]
FOLD_VIBCH2.526e-5751.07Bifunctional protein folD OS=Vibrio cholerae GN=fo... [more]
FOLD_VIBC32.526e-5751.07Bifunctional protein folD OS=Vibrio cholerae serot... [more]
FOLD_STRA52.526e-5746.89Bifunctional protein folD OS=Streptococcus agalact... [more]
FOLD_STRA32.526e-5746.89Bifunctional protein folD OS=Streptococcus agalact... [more]
FOLD_STRA12.526e-5746.89Bifunctional protein folD OS=Streptococcus agalact... [more]
FOLD_NEIG22.526e-5751.05Bifunctional protein folD OS=Neisseria gonorrhoeae... [more]
FOLD_NEIG12.526e-5751.05Bifunctional protein folD OS=Neisseria gonorrhoeae... [more]
C1TC_RAT2.526e-5749.59C-1-tetrahydrofolate synthase, cytoplasmic OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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