CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEON (Bifunctional protein folD OS=Shewanella oneidensis GN=folD PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.103e-60
Identity = 123/239 (51.46%), Postives = 157/239 (65.69%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    SEAEL++ + +LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA VIDVG N +++ T
Sbjct:    3 AQIIDGKAIAQSIRTQLREQVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSCSEAELLALIDQLNDDPSIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLENGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHESW (Bifunctional protein folD OS=Shewanella sp. (strain W3-18-1) GN=folD PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.212e-59
Identity = 124/239 (51.88%), Postives = 156/239 (65.27%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR++++E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA VIDVG N +D+ T
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLETNCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PHOLL (Bifunctional protein folD OS=Photorhabdus luminescens subsp. laumondii GN=folD PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.212e-59
Identity = 124/237 (52.32%), Postives = 153/237 (64.56%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A IIDGK +AQTIRSE+A  V+       + PGLAVV+VG    SQ YV+ KR+AC EVG  S   DLP+  SEAEL++ + +LN   D+ GILVQLPLP  I+  KVL  I  +KDVDGFHP NIG+L    R P   PCTP+G   LL+R G+   G  AV++G SNIVG P+SL LL A  T T+ H  T D    V +AD++I A G+   I G WIKPGA VIDVG N ++D
Sbjct:    3 AKIIDGKTIAQTIRSEVAVRVQQRVAAGRRAPGLAVVLVGENPASQIYVASKRRACEEVGFVSRSYDLPDTTSEAELLNLIDQLNNDSDIDGILVQLPLPAGIDNVKVLERIQPDKDVDGFHPYNIGRLCQ--RAPKLRPCTPRGIATLLERCGINTYGLNAVIIGASNIVGRPMSLELLLAGCTTTVTHRFTKDLRHHVEQADLLIVAVGKPNFIPGEWIKPGAIVIDVGINRLED 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ACTSZ (Bifunctional protein folD OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=folD PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.212e-59
Identity = 120/235 (51.06%), Postives = 156/235 (66.38%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            +I G  +A+  +SE+A ++R       +VPGLAV++VG    SQ YV  KRK+CAE+GI S   DLPE  +EAEL+S + +LN  P+V GILVQLPLPKHI+  KV+  I+  KDVDGFHP N+G+L    R P    CTP G ++LL+ +G  + G  AV+VG SNIVG P+++ LL A  TVT+ H  T D E  VR ADI++ A G+A  I G WIKPGA VIDVG N  +D
Sbjct:    5 VISGTELAKKTKSEVAGQIRRYISLGRRVPGLAVILVGSDPASQVYVGSKRKSCAEIGIDSKSYDLPETTTEAELLSIIDDLNRNPNVDGILVQLPLPKHIDSTKVIERIAPNKDVDGFHPYNVGRLCQ--RIPTLRACTPYGIMKLLETTGQDLHGLHAVIVGASNIVGRPMAMELLLAGCTVTVTHRFTRDLEEHVRRADILVVAVGKAEFINGDWIKPGATVIDVGINRGED 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PROA2 (Bifunctional protein folD OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=folD PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.582e-59
Identity = 120/247 (48.58%), Postives = 160/247 (64.78%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL----KADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            +IDGK V+  +++E+   V  L  K G VPGL V+IVG    SQ YV  K K+C E G+ S  I+LP + ++ EL+ K+  LN  PDVHGILVQ PLP HI E  V   I   KDVDGFHP N+G++ +   D  F+ CTP G LELL+R  +  +GK  VVVGRSNIVG P++ L+L    + + TVT+ HS T +   + R+ADI+IAA G+A  I    +KPGA VIDVG N ++D ++KSG+R
Sbjct:    3 LIDGKKVSTDLKNELKTRVEELKAKAGCVPGLTVIIVGEDPASQVYVRNKAKSCKETGMNSTVIELPAETTQEELLGKIEALNQDPDVHGILVQQPLPSHIEEYAVTMAIDPAKDVDGFHPENVGQMVLGNLDKCFISCTPFGILELLRRYDIETRGKHCVVVGRSNIVGKPMANLMLQKLRETNCTVTVCHSATQNMPELTRQADILIAAIGRANFITREMVKPGAVVIDVGINRIEDPSRKSGFR 249          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PHEZH (Bifunctional protein folD OS=Phenylobacterium zucineum (strain HLK1) GN=folD PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.582e-59
Identity = 128/242 (52.89%), Postives = 161/242 (66.53%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAV--DDSTK 777
            A IIDGK +A+ +R ++A+EV  L   Y   PGLAVV+VG    SQ YV  K +    VG+ S    LP    + EL+  V ELNA P +HGILVQLPLPKH++E+ V+  IS +KDVDG H +N G+LA     P  +PCTP GCL +L+ +   + GKRAVVVGRS +VG PV+ LLL+AD TVTI HS T D  ++ READI++AA G+  MI+G WIKPGA VIDVG N V  DD  K
Sbjct:    3 AKIIDGKVLAERLRGQVADEVARLRADYRLQPGLAVVLVGEDPASQVYVRSKGEHSLAVGMHSVTHRLPADTRQDELLRLVAELNADPLIHGILVQLPLPKHLDEKAVIAAISPDKDVDGLHVVNAGRLA--SGLPALVPCTPLGCLIMLRETLGDLTGKRAVVVGRSLLVGKPVAQLLLQADCTVTIAHSRTVDLPAVCREADILVAAVGRPRMIRGDWIKPGATVIDVGINRVPFDDPEK 242          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PASMU (Bifunctional protein folD OS=Pasteurella multocida GN=folD PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.582e-59
Identity = 117/233 (50.21%), Postives = 159/233 (68.24%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTN 756
            A +I G  +++TI+S++A+++   +++  + PGLAV++VG    SQ YV  KRK+CAE+GI+S   DLPE   E+EL++ + ELNA   V GILVQLPLPKHI+  KV+  I+ EKDVDGFHP N+G+L    R P    CTP G ++LL+ +G+ + GK AV+VG SNIVG P++L LL A  TVT+ H  T D    VR+ADI++ A G+   I G WIK GA VIDVG N
Sbjct:    3 AQVISGTELSKTIKSQVAQKIETYTQQGKRSPGLAVILVGADPASQVYVGSKRKSCAEIGIQSKSYDLPETTQESELLALIDELNADTTVDGILVQLPLPKHIDSTKVIERITPEKDVDGFHPYNVGRLCQ--RIPTLRACTPYGVMKLLETTGIDLHGKHAVIVGASNIVGRPMALELLLAGCTVTVTHRFTKDLAHHVRQADILVVAVGKPKFIPGDWIKAGAIVIDVGIN 233          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHELP (Bifunctional protein folD OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=folD PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.699e-59
Identity = 122/236 (51.69%), Postives = 154/236 (65.25%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A IIDGKA+AQ+IR +++ +V    E   +VPGLAV++VG    SQ YV  KR+AC EVG  S   DLP + SEA+L++ + + N  P + GILVQLPLP HI E KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T D E  VR AD++I A G+   I G WIKPGA VIDVG N ++
Sbjct:    3 AQIIDGKAIAQSIRKQLSAKVTARKEAGKRVPGLAVILVGADPASQVYVGSKRRACEEVGFLSQSFDLPTETSEADLLALIDKCNEDPSIDGILVQLPLPDHIEESKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTRDLEDKVRRADLLIVAVGKPNFIPGEWIKPGAIVIDVGINRLE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_NOVAD (Bifunctional protein folD OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=folD PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.699e-59
Identity = 120/235 (51.06%), Postives = 157/235 (66.81%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAV 762
            A +IDGKA A T+R  + +       + G+  GLAVV+VG    SQ YV  K K+  E G+ SF+  LP   +EA+L++ V +LNA P V GILVQLPLP+H++E+KV+  I+ +KDVDGFH +N G+LA+    P F+PCTP GCL LLK     + G  AVV+GRSNIVG P++ LL+    TVT+ HS T +   +VR ADIV+AA G+  M+KG WIKPGA VIDVG N V
Sbjct:    3 AAVIDGKAFAATLRGRVGDLATAFEARAGRKAGLAVVLVGEDPASQVYVRSKGKSTLEAGMASFEHKLPADTAEADLLAVVEQLNADPAVDGILVQLPLPRHMDEQKVIAAINPDKDVDGFHVINAGRLAV--GQPGFVPCTPLGCLMLLKDRLGDLSGLDAVVIGRSNIVGKPMAQLLIAESCTVTVAHSRTKNLPEVVRRADIVVAAVGRPEMVKGDWIKPGATVIDVGINRV 235          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_CHLPD (Bifunctional protein folD OS=Chlorobium phaeobacteroides (strain DSM 266) GN=folD PE=3 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.699e-59
Identity = 124/247 (50.20%), Postives = 158/247 (63.97%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPV-SLLLLKADA---TVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            IIDGK ++Q +++E+  +V       GKVPGL V+IVG    SQ YV  K K+C E+G+ S  I++P    +  L+  + ELN  P VHGILVQ PLPK I+E  V   I   KDVDGFHP N+G+L M   D  F+ CTP G LELL R  +  KGK  VVVGRSNIVG P+ +L++ K DA   TVT+ HS T D  S  ++ADI+IAA G+A  I    +KPGA VIDVG N ++D + KSGYR
Sbjct:    3 IIDGKKISQDLKNELKTDVAHFQASIGKVPGLTVIIVGHDPASQVYVRNKAKSCLEIGMHSTVIEMPHDTPQETLLQAIRELNQDPAVHGILVQQPLPKQIDEFAVTLAIDPSKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLDRYNIETKGKHCVVVGRSNIVGKPMANLMMQKLDATNCTVTVCHSATRDIPSFTKQADILIAALGKARFITADMVKPGAVVIDVGINRIEDPSTKSGYR 249          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_SHEON7.103e-6051.46Bifunctional protein folD OS=Shewanella oneidensis... [more]
FOLD_SHESW1.212e-5951.88Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_PHOLL1.212e-5952.32Bifunctional protein folD OS=Photorhabdus luminesc... [more]
FOLD_ACTSZ1.212e-5951.06Bifunctional protein folD OS=Actinobacillus succin... [more]
FOLD_PROA21.582e-5948.58Bifunctional protein folD OS=Prosthecochloris aest... [more]
FOLD_PHEZH1.582e-5952.89Bifunctional protein folD OS=Phenylobacterium zuci... [more]
FOLD_PASMU1.582e-5950.21Bifunctional protein folD OS=Pasteurella multocida... [more]
FOLD_SHELP2.699e-5951.69Bifunctional protein folD OS=Shewanella loihica (s... [more]
FOLD_NOVAD2.699e-5951.06Bifunctional protein folD OS=Novosphingobium aroma... [more]
FOLD_CHLPD2.699e-5950.20Bifunctional protein folD OS=Chlorobium phaeobacte... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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