CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_AZOC5 (Bifunctional protein folD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=folD PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.699e-59
Identity = 127/239 (53.14%), Postives = 159/239 (66.53%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKS 783
            IDGKA A  +R+ IAEEV +L   +   PGLAVV+VG    SQ YV  K    AE G+ SF+  LP   +EA+L++ V +LNA P V+GILVQLPLP H++  KVL  I   KDVDGFH +N G+LA+ G D L +PCTP GC+ LLK     + G  AVVVGRSNIVG P + LLL+ D TVTI HS T D   + R+ADI++AA G+  M++G WIKPGA VIDVG N V  +  K+
Sbjct:    7 IDGKAFAAGLRARIAEEVAVLVRDHDLKPGLAVVLVGEDPASQVYVRNKAAQTAEAGMASFEYKLPADTAEADLLALVEKLNADPAVNGILVQLPLPAHLDSMKVLAAIDPAKDVDGFHVVNAGRLAV-GLDAL-VPCTPLGCVMLLKHHLGNLSGLNAVVVGRSNIVGKPAAQLLLREDCTVTIAHSRTRDLPGMCRQADILVAAVGRPEMVRGDWIKPGATVIDVGINRVPKADGKT 243          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: C1TM_YEAST (C-1-tetrahydrofolate synthase, mitochondrial OS=Saccharomyces cerevisiae GN=MIS1 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.699e-59
Identity = 112/244 (45.90%), Postives = 162/244 (66.39%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKV-PGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            I+ G+ +AQ+IR +  +E++ +  K+    P L ++ VG R DS +YV MK KA  +  +      LP +++E EL+ K+ ++N    +HG+L+QLPLP+H++E  +   +  +KDVDGFH  N G+LA KG  P F+PCTP GC++LL+ + V + GK AVV+GRS+IVG P++ LL  A+ATVT+ HSHT +   +V +ADIVIAA G    +K  WIK GA VIDVG N V D +KKSG +
Sbjct:   37 ILSGRKLAQSIREKANDEIQAIKLKHPNFKPTLKIIQVGARPDSSTYVRMKLKASKDSNVDCIIEKLPAEITEVELLKKISDINDDDSIHGLLIQLPLPRHLDETTITNAVDFKKDVDGFHRYNAGELAKKGGKPYFIPCTPYGCMKLLEEAHVKLDGKNAVVLGRSSIVGNPIASLLKNANATVTVCHSHTRNIAEVVSQADIVIAACGIPQYVKSDWIKEGAVVIDVGINYVPDISKKSGQK 280          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SILST (Bifunctional protein folD OS=Silicibacter sp. (strain TM1040) GN=folD PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.525e-59
Identity = 122/243 (50.21%), Postives = 157/243 (64.61%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A IIDGKA A  +R ++ E V  L E++G  PGLAVV+VG    SQ YV  K K   EVG+ S++  L    SEA+L++ + +LN   +VHGILVQLPLPKH++E+ V+  I+ EKDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIK GA VIDVG N +D   K  G
Sbjct:    3 AEIIDGKAFAAKVRGQVTEHVTRLKEEHGITPGLAVVLVGEDPASQVYVRSKGKQTVEVGMNSYEHKLDADTSEADLLALIDQLNKDSEVHGILVQLPLPKHLDEDLVINSIAPEKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDYHGSLSGLDAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLPEVVRRADIVVAAVGRPEMVPGDWIKEGATVIDVGINRIDAPEKGEG 243          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB9 (Bifunctional protein folD OS=Shewanella baltica (strain OS195) GN=folD PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.525e-59
Identity = 124/239 (51.88%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA VIDVG N +D+ T
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNEDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PORGI (Bifunctional protein folD OS=Porphyromonas gingivalis GN=folD PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.525e-59
Identity = 122/247 (49.39%), Postives = 165/247 (66.80%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLK----ADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            ++DGK ++  I+ EIA  V  L EK G+ P LA V+VG    S++Y++ K KAC EVG  S  I   + V+E EL++ VH LN  P V G +VQLPLPKHI+E+K++  +   KDVDGFHP+N+G+L++    P F+  TPKG +ELL+R  +  +GK  VV+GRSNIVG PVS LLL+     D T+TI HS TP+ + +   ADI+IAA GQ   +    +KPGA V+DVGT  V DST+KSG+R
Sbjct:    7 LLDGKKISGEIKQEIAAVVNELLEKGGRRPHLAGVLVGHDGGSETYMASKVKACEEVGFTSSLIRYEDDVTEEELLACVHRLNQDPTVDGFIVQLPLPKHIDEQKIIEAVDPRKDVDGFHPINVGRLSI--GLPGFVSATPKGIVELLRRYNIPTRGKHCVVLGRSNIVGKPVSQLLLQKGEPGDCTITICHSRTPNIKEVCLTADIIIAALGQPEFLTADMVKPGAVVVDVGTTLVPDSTRKSGFR 251          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD1_PSEMY (Bifunctional protein folD 1 OS=Pseudomonas mendocina (strain ymp) GN=folD1 PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.525e-59
Identity = 121/237 (51.05%), Postives = 159/237 (67.09%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A +IDGKA+A ++R +IA+ V    ++  + PGLAV++VG    SQ YVS KRK C EVG  S   DLP + S+A+L++ + ELN  P + GILVQLPLP+H++   +L  I  +KDVDGFHP NIG+LA   R PL  PCTPKG + LL+ +G  + G  AVVVG SNIVG P+++ LL A  TVT+ H  T D    V +ADIV+ AAG+  ++KG WIK GA VIDVG N  +D
Sbjct:    3 AQLIDGKAIAASLRQQIAQRVAERRQQGLRAPGLAVILVGTDPASQVYVSHKRKDCEEVGFLSRAYDLPAETSQADLLALIDELNEDPTIDGILVQLPLPEHLDSSLLLERIRPDKDVDGFHPYNIGRLAQ--RMPLLRPCTPKGIMTLLESTGADLYGMHAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVGQADIVVVAAGKPGLVKGEWIKEGAIVIDVGINRQED 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB8 (Bifunctional protein folD OS=Shewanella baltica (strain OS185) GN=folD PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.604e-59
Identity = 124/239 (51.88%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA VIDVG N +D+ T
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB5 (Bifunctional protein folD OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=folD PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.604e-59
Identity = 124/239 (51.88%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA VIDVG N +D+ T
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEB2 (Bifunctional protein folD OS=Shewanella baltica (strain OS223) GN=folD PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.604e-59
Identity = 124/239 (51.88%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR++++E+V    E   ++PGLAVV+VG    SQ YV  KRKAC EVG  S   DL    SE EL+S +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R AD+V+ A G+   I G WIKPGA VIDVG N +D+ T
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRIPGLAVVLVGADPASQVYVGSKRKACEEVGFISRSYDLETSCSEDELLSLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRIADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PHOPR (Bifunctional protein folD OS=Photobacterium profundum GN=folD PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.604e-59
Identity = 121/236 (51.27%), Postives = 153/236 (64.83%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A IIDGK +AQT+R E+A  V+   E   + PGLAVV+VG    SQ YVS KRKAC EVG  S   DLP    E EL++ ++ELN   ++ GILVQLPLP  I+   +L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL+R  + ++GK AV+VG SNIVG P++L +L A AT T  H  T D E  +R+ADI++ A G+   I G WIK GA VIDVG N +D
Sbjct:    3 AQIIDGKLIAQTVRQEVAARVKARVEAGLRAPGLAVVLVGQDPASQIYVSSKRKACEEVGFISQSFDLPANTKEIELLALINELNTNKEIDGILVQLPLPAGIDTTNILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLERYNIPVRGKHAVIVGASNIVGRPMTLEMLLAGATTTTCHRFTQDLEHHIRQADILVVAVGKPHFIPGDWIKEGATVIDVGINRLD 236          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_AZOC52.699e-5953.14Bifunctional protein folD OS=Azorhizobium caulinod... [more]
C1TM_YEAST2.699e-5945.90C-1-tetrahydrofolate synthase, mitochondrial OS=Sa... [more]
FOLD_SILST3.525e-5950.21Bifunctional protein folD OS=Silicibacter sp. (str... [more]
FOLD_SHEB93.525e-5951.88Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_PORGI3.525e-5949.39Bifunctional protein folD OS=Porphyromonas gingiva... [more]
FOLD1_PSEMY3.525e-5951.05Bifunctional protein folD 1 OS=Pseudomonas mendoci... [more]
FOLD_SHEB84.604e-5951.88Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHEB54.604e-5951.88Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_SHEB24.604e-5951.88Bifunctional protein folD OS=Shewanella baltica (s... [more]
FOLD_PHOPR4.604e-5951.27Bifunctional protein folD OS=Photobacterium profun... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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