CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_MARAV (Bifunctional protein folD OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=folD PE=3 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 4.604e-59
Identity = 121/237 (51.05%), Postives = 153/237 (64.56%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A +I+GK +A  +R ++A  V    +K  + PGLAVV+VG    SQ YV  KRKAC + GI S   DLPE  S+A L + V ELN  P V GILVQLPLP H++ + +L +I  +KDVDGFHP NIG+L    R P   PCTP G + LL   G   KG+ AV+VG SNIVG P+S+ LL   AT T+ H  T + E  V EADI++AA G+  +IKG W+KPGA VIDVG N +DD
Sbjct:    3 AKLINGKEIAAQVRQQVAAGVEARKQKGLRAPGLAVVLVGHDPASQVYVGNKRKACEQAGILSLSYDLPEDTSQAALEALVDELNENPAVDGILVQLPLPSHLDADPILVKIRPDKDVDGFHPYNIGRLMQ--RKPTLRPCTPAGVITLLDSIGTPYKGQHAVIVGASNIVGRPMSMELLLKGATTTVCHRFTDNLEKFVGEADILVAAVGKPGIIKGEWVKPGATVIDVGINRMDD 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD3_SPHWW (Bifunctional protein folD 3 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=folD3 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.604e-59
Identity = 124/235 (52.77%), Postives = 155/235 (65.96%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAV 762
            A IIDGKA A  +R+ +A  V       G+ PGLAVV+VG    SQ YV  K KA  E G++SF+  LP   SE EL++ V  LNA   V GILVQLPLP HI+E+KV+  I  +KDVDGFH +N G+LA+   +  ++PCTP GCL LLK     + G  AVV+GRSNIVG P++ LLL  + TVTI HS T D   +VR ADIV+AA G+  M++G WI+PGA VIDVG N V
Sbjct:    9 AEIIDGKAYAAGLRARVATAVPAFRVAAGRAPGLAVVLVGEDAASQVYVRSKHKATVEAGMESFEHRLPATASETELLALVERLNADDRVDGILVQLPLPPHIDEKKVIATIDPDKDVDGFHVVNAGRLAV--GEAGYVPCTPLGCLMLLKDRRGDLSGLEAVVIGRSNIVGKPMAALLLAENCTVTIAHSRTRDLAEVVRRADIVVAAVGRPEMVRGDWIRPGATVIDVGINRV 241          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEPC (Bifunctional protein folD OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=folD PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.013e-59
Identity = 122/239 (51.05%), Postives = 156/239 (65.27%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR++++E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    +E EL++ +  LN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA VIDVG N +D+ T
Sbjct:    3 AQIIDGKAIAQSIRTKLSEKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLETNCTEDELLNLIDSLNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLDNGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_OCHA4 (Bifunctional protein folD OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=folD PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.013e-59
Identity = 121/244 (49.59%), Postives = 156/244 (63.93%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K K   E G  S   DLPE  SE EL+  +  LN  P +HGILVQLPLPKHI+  +V+  IS +KDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGIVPGIAVVIVGEDPASQVYVASKSKKAKECGFHSVQHDLPETASEQELLDLIESLNNDPAIHGILVQLPLPKHIDSGRVIQTISPDKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERIHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARTADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_CHLPB (Bifunctional protein folD OS=Chlorobium phaeobacteroides (strain BS1) GN=folD PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.013e-59
Identity = 122/248 (49.19%), Postives = 159/248 (64.11%), Query Frame = 1
Query:   61 TIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLL----KADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSGYR 792
            TIIDGK V+  ++ E+   V    +K   VPGL V+IVG    SQ YV  K K+C E+G+ S  I+LP + +EAEL++ +  LN   DVHGILVQ PLP HI++  V   I   KDVDGFHP N+G++ +   D  F+ CTP G LEL  R  +  KGK  VV+GRSNIVG P++ L+L    +++ TVTI HS T +   I R+ADIVIAA G+   +    IKPGA VIDVG N V+D ++KSGYR
Sbjct:    2 TIIDGKQVSANLKQELKTAVEACRQKTDAVPGLTVIIVGEDPASQVYVRNKSKSCKEIGMNSTVIELPAETTEAELLAGIEALNNDNDVHGILVQQPLPAHIDDYAVTMAILPSKDVDGFHPENVGQMVLGNLDKCFISCTPYGILELFSRYSIETKGKHCVVIGRSNIVGKPMANLMLQKLKESNCTVTICHSATSNMPEITRQADIVIAAIGRPEYVTEDMIKPGAVVIDVGINRVEDPSRKSGYR 249          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ACIF5 (Bifunctional protein folD OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=folD PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.013e-59
Identity = 118/234 (50.43%), Postives = 159/234 (67.95%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            IDGKA+AQ I ++I+        ++G+ PGLAVV+VG    S+ YV  KR+ CA VGI SF  +LP   +  +L++ + ELN    V GILVQLPLP H + E+++  I++EKDVDGFHP NIG+LA+  R PL   CTP G + LL+ SG+ IKGK AV+VG SNIVG P++L LL A ATVT+ H  T D  + V  A++++AAAG+  +I G+WI+ GA VIDVG N + D
Sbjct:    6 IDGKAIAQKIHADISLRSHAFLRQWGRSPGLAVVLVGADPASRIYVQKKRETCASVGIASFSANLPADTNPQQLLAHIGELNVNDAVDGILVQLPLPPHFDPEEIIEAIAVEKDVDGFHPYNIGRLAL--RAPLLRSCTPAGIMTLLQESGIDIKGKEAVIVGASNIVGRPMALELLLAGATVTVCHRFTRDLAAHVGRAELLVAAAGKPGLISGAWIREGAVVIDVGINRLPD 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ACIF2 (Bifunctional protein folD OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=folD PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.013e-59
Identity = 118/234 (50.43%), Postives = 159/234 (67.95%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            IDGKA+AQ I ++I+        ++G+ PGLAVV+VG    S+ YV  KR+ CA VGI SF  +LP   +  +L++ + ELN    V GILVQLPLP H + E+++  I++EKDVDGFHP NIG+LA+  R PL   CTP G + LL+ SG+ IKGK AV+VG SNIVG P++L LL A ATVT+ H  T D  + V  A++++AAAG+  +I G+WI+ GA VIDVG N + D
Sbjct:    6 IDGKAIAQKIHADISLRSHAFLRQWGRSPGLAVVLVGADPASRIYVQKKRETCASVGIASFSANLPADTNPQQLLAHIGELNVNDAVDGILVQLPLPPHFDPEEIIEAIAVEKDVDGFHPYNIGRLAL--RAPLLRSCTPAGIMTLLQESGIDIKGKEAVIVGASNIVGRPMALELLLAGATVTVCHRFTRDLAAHVGRAELLVAAAGKPGLISGAWIREGAVVIDVGINRLPD 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD1_SILPO (Bifunctional protein folD 1/3 OS=Silicibacter pomeroyi GN=folD1 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.013e-59
Identity = 122/240 (50.83%), Postives = 154/240 (64.17%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTK 777
            AT+IDGKA A  IR ++AE V  L   +G  PGLAVV+VG    SQ YV  K K   EVG+ S++  L    SEA+L++ +  LN  PDVHGILVQLPLP H++E+ V+  I   KDVDGFH  N+G L    +    +PCTP GCL +L+    ++ G  AVV+GRSNIVG P++ LLL    TVTI HS T D   +VR ADIV+AA G+  M+ G WIKPGA VIDVG N ++   K
Sbjct:    3 ATVIDGKAFAARIRGQVAEHVAELKAGHGITPGLAVVLVGEDPASQVYVRSKGKQTVEVGMNSYEHKLDADTSEADLLALIDRLNGDPDVHGILVQLPLPGHLDEDLVINAIDPAKDVDGFHISNVGLLGTGQKS--MVPCTPLGCLMMLRDHHGSLSGMDAVVIGRSNIVGKPMAQLLLGDSCTVTIAHSRTKDLADVVRRADIVVAAVGRPEMVPGDWIKPGATVIDVGINRIERDGK 240          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_VIBFM (Bifunctional protein folD OS=Vibrio fischeri (strain MJ11) GN=folD PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.853e-59
Identity = 120/236 (50.85%), Postives = 153/236 (64.83%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A IIDGK ++QT+RSE+   V+   E   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE+EL++ + ELN  P++ GILVQLPLP  ++  K+L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL R  + ++G  AVVVG SNIVG P++L LL A  T T  H  T D ES +R+AD+V+ A G+   I G WIK GA V+DVG N +D
Sbjct:    3 AQIIDGKLISQTVRSEVGARVKARVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPTTTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLDRYNIQVRGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLESHIRQADLVVVAVGKPNFIPGEWIKEGAVVVDVGINRLD 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_VIBF1 (Bifunctional protein folD OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=folD PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.853e-59
Identity = 120/236 (50.85%), Postives = 153/236 (64.83%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A IIDGK ++QT+RSE+   V+   E   + PGLAVV+VG    SQ YV  KR+AC EVG  S   DLP   SE+EL++ + ELN  P++ GILVQLPLP  ++  K+L  I  EKDVDGFHP N+G+L+   R P    CTPKG + LL R  + ++G  AVVVG SNIVG P++L LL A  T T  H  T D ES +R+AD+V+ A G+   I G WIK GA V+DVG N +D
Sbjct:    3 AQIIDGKLISQTVRSEVGARVKARVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPTTTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNVGRLSQ--RIPKLRSCTPKGIITLLDRYNIQVRGMHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLESHIRQADLVVVAVGKPNFIPGEWIKEGAVVVDVGINRLD 236          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_MARAV4.604e-5951.05Bifunctional protein folD OS=Marinobacter aquaeole... [more]
FOLD3_SPHWW4.604e-5952.77Bifunctional protein folD 3 OS=Sphingomonas wittic... [more]
FOLD_SHEPC6.013e-5951.05Bifunctional protein folD OS=Shewanella putrefacie... [more]
FOLD_OCHA46.013e-5949.59Bifunctional protein folD OS=Ochrobactrum anthropi... [more]
FOLD_CHLPB6.013e-5949.19Bifunctional protein folD OS=Chlorobium phaeobacte... [more]
FOLD_ACIF56.013e-5950.43Bifunctional protein folD OS=Acidithiobacillus fer... [more]
FOLD_ACIF26.013e-5950.43Bifunctional protein folD OS=Acidithiobacillus fer... [more]
FOLD1_SILPO6.013e-5950.83Bifunctional protein folD 1/3 OS=Silicibacter pome... [more]
FOLD_VIBFM7.853e-5950.85Bifunctional protein folD OS=Vibrio fischeri (stra... [more]
FOLD_VIBF17.853e-5950.85Bifunctional protein folD OS=Vibrio fischeri (stra... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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