CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_ZYMMO (Bifunctional protein folD OS=Zymomonas mobilis GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 120/247 (48.58%), Postives = 161/247 (65.18%), Query Frame = 1
Query:   55 KATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAV---DDSTKKSG 786
            +A IIDGK  +  +R++IAE+V+   ++   VPGLAVV+VG    S+ YV  K +    VG+ S    L    S+ EL+  +  LN  P VHGILVQLPLPKHI+   +L  I  +KDVDGFH +N G+LA+    P  +PCTP GC+ LL+ S  ++KGK A+V+GRS IVG P++ LLL AD TVT+ H HT + E + R+ADIV+AA G    +K SW+KPGA VIDVG N V   D++ K +G
Sbjct:    3 EAIIIDGKEFSSNLRNKIAEDVKAFKKERNVVPGLAVVLVGEDPASRIYVRKKEEMTTAVGMNSLSYRLDANASQQELLDLIETLNHDPAVHGILVQLPLPKHIDTPTILEAIDPDKDVDGFHVVNAGRLAIG--TPSLVPCTPAGCMMLLEHSLGSLKGKNALVIGRSTIVGRPMAQLLLAADCTVTVAHRHTKNLEELCRQADIVVAAVGIPHFVKASWLKPGAVVIDVGINRVPAEDEAAKAAG 247          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_WOLWR (Bifunctional protein folD OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 115/234 (49.15%), Postives = 155/234 (66.24%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            IIDGK +A  +   +++++ +L  +Y   P L V++VG    SQ YV  K+K    +GI S  I LP+ +SE ELI K++ELN  P VHGILVQLPLP HI+  +V+  +S+EKDVDGFH  N+GKL +KG     +PCTPKG L L+K     + GK AVV+GRSNIVG P+  LLL+ + TVTI+HS + D      +ADIV+AA G+   ++  WIK GA VIDVG N+V+
Sbjct:    4 IIDGKKIANDLCERLSQKIDILKREYNIFPCLKVILVGSNPASQVYVRNKQKKAESIGISSETIVLPDNISEDELIEKINELNEDPSVHGILVQLPLPNHISASRVINTVSVEKDVDGFHDENVGKL-VKGEKNCLIPCTPKGSLHLIKSIEENLSGKNAVVIGRSNIVGKPMFYLLLQENCTVTILHSQSKDLAEYCSKADIVVAAVGKPNFVQADWIKKGAIVIDVGINSVN 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_VIBSL (Bifunctional protein folD OS=Vibrio splendidus (strain LGP32) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 120/233 (51.50%), Postives = 154/233 (66.09%), Query Frame = 1
Query:   67 IDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            IDGK ++QT+RSE+A  V+  ++   + PGLAVV+VG    SQ YV  KRKAC EVG  S   DLP   +E EL++ V +LN  P++ GILVQLPLP  I+  +VL  I+ EKDVDGFHP N+G+LA   R P    CTPKG + LL R  + ++GK AVVVG SNIVG P++L LL A  T T  H  T D E  VR+AD+V+ A G+   I G+WIK GA V+DVG N ++
Sbjct:    6 IDGKLISQTVRSEVAARVKARTQAGLRAPGLAVVLVGEDPASQVYVGSKRKACEEVGFVSKSYDLPATATEDELLTLVDQLNEDPEIDGILVQLPLPAGIDSTQVLERITPEKDVDGFHPYNVGRLAQ--RMPKLRSCTPKGIITLLDRYNIDLRGKHAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKDLEGHVRQADVVVVAVGKPNFIPGAWIKKGAVVVDVGINRLE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SOLUE (Bifunctional protein folD OS=Solibacter usitatus (strain Ellin6076) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 123/238 (51.68%), Postives = 160/238 (67.23%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTK 777
            I+DG  V   I+ E+   +  L+  +G+ PGLAVV+VG    S+ YV  K K C ++GI S  I  P+ +S  EL++ V  LNA  ++ GILVQLPLP  ++ +++L  +S  KDVDGFHP N+G  A+    P    CTP G +ELLKR G+ I G+RAVVVGRS+IVG PV++LLL   ATVTI HS TPD +S+ READI++AA G+A MI G +IKPGA VIDVGTN V D  K
Sbjct:    4 ILDGNRVRDEIKGELKPRIAALAA-HGRPPGLAVVLVGNNPASEIYVRNKIKTCHDLGIYSESITPPDTISTEELLAIVQGLNARAEIDGILVQLPLPPQVDTKRILMAVSPAKDVDGFHPCNVG--ALVANLPAPRACTPAGIMELLKRGGIPIAGQRAVVVGRSDIVGKPVAMLLLHEHATVTICHSKTPDLKSLCREADILVAAIGRAAMITGEFIKPGATVIDVGTNHVADREK 238          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SODGM (Bifunctional protein folD OS=Sodalis glossinidius (strain morsitans) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 121/236 (51.27%), Postives = 156/236 (66.10%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A IIDG+AVAQ +RSE+A  ++   +   + PGLAVV+VGG   SQ YV+ KRKAC +VG  S   DLP  V+EA L++ + +LNA   V+GILVQLPLP  I+   VL  I+ +KDVDGFHP N+G+L    R PL  PCTP+G + LL+R  +   G  AVVVG SNIVG P+SL LL A  TVT+ H  T D    +  AD+++ A G+A  I G WIKPGA V+DVG N ++
Sbjct:    3 AKIIDGRAVAQQVRSEVAARIQARLKAGKRAPGLAVVLVGGDPASQIYVASKRKACEDVGFISLSYDLPNTVTEAALLALIDQLNADHRVNGILVQLPLPAGIDNISVLERIAPDKDVDGFHPYNVGRLCQ--RAPLLRPCTPRGIVTLLERYHIDTFGLNAVVVGASNIVGRPMSLELLLAGCTVTVTHRFTRDLRRHIENADLLVVAVGKASFIPGEWIKPGAVVMDVGINRLE 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHESR (Bifunctional protein folD OS=Shewanella sp. (strain MR-7) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 121/239 (50.63%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    +E  L++ + ELN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA VIDVG N +++ T
Sbjct:    3 AQIIDGKAIAQSIRTQLREKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSYTEEALLALIDELNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLENGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHESM (Bifunctional protein folD OS=Shewanella sp. (strain MR-4) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 121/239 (50.63%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    +E  L++ + ELN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA VIDVG N +++ T
Sbjct:    3 AQIIDGKAIAQSIRTQLREKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSYTEEALLALIDELNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLENGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHESA (Bifunctional protein folD OS=Shewanella sp. (strain ANA-3) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 121/239 (50.63%), Postives = 155/239 (64.85%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR+++ E+V    E   +VPGLAV++VG    SQ YV  KRKAC EVG  S   DL    +E  L++ + ELN  P + GILVQLPLP HI + KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +GV   G  AVVVG SNIVG P++L LL A  T T  H  T + E  +R+AD+V+ A G+   I G WIKPGA VIDVG N +++ T
Sbjct:    3 AQIIDGKAIAQSIRTQLREKVTARKEAGQRVPGLAVILVGADPASQVYVGSKRKACEEVGFISRSYDLDTSYTEEALLALIDELNDDPTIDGILVQLPLPAHIEDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGVDTYGLDAVVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKIRQADLVVVAVGKPGFIPGEWIKPGAIVIDVGINRLENGT 239          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PROMH (Bifunctional protein folD OS=Proteus mirabilis (strain HI4320) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 121/237 (51.05%), Postives = 154/237 (64.98%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A IIDGK +AQTIRSE+AE+V+   +   + PGLAV++VG    SQ YV+ KRKAC EVG  S   DLP+  SEA+L++ +  LN    + GILVQLPLP  I+  KVL  I  +KDVDGFHP NIG+L    R P   PCTP+G + LL+R  + + G  AV++G SNIVG P+SL LL A  T T+ H  T D    V  AD+V+ A G+   I G WIKPGA VIDVG N +++
Sbjct:    3 ARIIDGKTIAQTIRSEVAEKVKQRIKIGKRAPGLAVILVGDNPASQIYVASKRKACDEVGFISRSYDLPDTTSEADLLNLIDTLNEDNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNIGRLCQ--RAPKLRPCTPRGIVTLLERCNIPMNGLNAVIIGASNIVGRPMSLELLLAGCTTTVTHRFTKDLRFHVEHADLVVVAVGKPNFIPGEWIKPGAIVIDVGINRLEN 237          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_CLOCE (Bifunctional protein folD OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.285e-58
Identity = 119/233 (51.07%), Postives = 161/233 (69.10%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTN 756
            A +++G  +A  +++ +  ++  L  K G  PGLAV+IVG    S+ YV+ K+  C E+GIKSF+  LPE  SE EL+  +  LN    V+GILVQLP+PKHINEEKV+  IS +KD D FHP+N+GKL M G+ P FLPCTP G +ELL+ +G+ I GK  VVVGRSNIVG P ++LLL  +ATVTI HS T + E + R AD+++ A G++  IK  ++KPGA VIDVG +
Sbjct:    3 AKVLNGTELAAKVKAGLKAKIDELKSK-GINPGLAVIIVGDDPASRVYVNHKKNDCTEIGIKSFEYALPESTSEEELLDLIETLNNDASVNGILVQLPIPKHINEEKVIAAISPDKDADCFHPMNVGKL-MIGK-PEFLPCTPAGVVELLEENGIEISGKNCVVVGRSNIVGKPQAILLLAKNATVTICHSKTANIEEVCRSADVLVVAIGKSEFIKPEFVKPGAVVIDVGVS 232          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_ZYMMO2.285e-5848.58Bifunctional protein folD OS=Zymomonas mobilis GN=... [more]
FOLD_WOLWR2.285e-5849.15Bifunctional protein folD OS=Wolbachia sp. subsp. ... [more]
FOLD_VIBSL2.285e-5851.50Bifunctional protein folD OS=Vibrio splendidus (st... [more]
FOLD_SOLUE2.285e-5851.68Bifunctional protein folD OS=Solibacter usitatus (... [more]
FOLD_SODGM2.285e-5851.27Bifunctional protein folD OS=Sodalis glossinidius ... [more]
FOLD_SHESR2.285e-5850.63Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_SHESM2.285e-5850.63Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_SHESA2.285e-5850.63Bifunctional protein folD OS=Shewanella sp. (strai... [more]
FOLD_PROMH2.285e-5851.05Bifunctional protein folD OS=Proteus mirabilis (st... [more]
FOLD_CLOCE2.285e-5851.07Bifunctional protein folD OS=Clostridium celluloly... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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