CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_SHEFN (Bifunctional protein folD OS=Shewanella frigidimarina (strain NCIMB 400) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 117/239 (48.95%), Postives = 157/239 (65.69%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDST 774
            A IIDGKA+AQ+IR+ + ++V    +   + PGLAV++VG    SQ YV  KRKAC EVG +S   DL  + +EAEL++ + E NA P + GILVQLPLP HI++ KV+  I  +KDVDGFHP N+G+LA   R P+   CTP G + L+K +G+   G  A VVG SNIVG P++L LL A  T T  H  T + E  VR+AD+++ A G+   I G WIKPGA VIDVG N +++ +
Sbjct:    3 AQIIDGKAIAQSIRTTLKQKVTQRRQAGFRAPGLAVILVGSDAASQVYVGSKRKACEEVGFESQSFDLDTETTEAELLALIDECNANPSIDGILVQLPLPAHIDDSKVIERIRPDKDVDGFHPYNVGRLAQ--RIPVLRSCTPMGIMTLIKSTGIDTYGLDATVVGASNIVGRPMTLELLLAGCTTTTCHRFTKNLEQKVRQADLLVVAVGKPGFIPGDWIKPGAIVIDVGINRLENGS 239
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUSU (Bifunctional protein folD OS=Brucella suis GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUSI (Bifunctional protein folD OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUO2 (Bifunctional protein folD OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUME (Bifunctional protein folD OS=Brucella melitensis GN=folD PE=3 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUMB (Bifunctional protein folD OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUC2 (Bifunctional protein folD OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUAB (Bifunctional protein folD OS=Brucella abortus GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUA2 (Bifunctional protein folD OS=Brucella abortus (strain 2308) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
[Close]
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_BRUA1 (Bifunctional protein folD OS=Brucella abortus (strain S19) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58
Identity = 119/244 (48.77%), Postives = 156/244 (63.93%), Query Frame = 1 
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKR-SGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            A +IDGK +A+ + S +  E   L    G VPG+AVVIVG    SQ YV+ K +   E G  S   DLPE  SE EL++ +  LN  P +HGILVQLPLP HI+  +V+  I+ EKDVDGFH +N+GKL     +  F+PCTP G + +++R  G  + G  AVV+GRSNIVG P+  LLL A+ATVT+ HS T D  +I R ADI++AA G+  M+KG W+KPGA VIDVG N +    +  G
Sbjct:    2 AQLIDGKKLAEDVVSTVKTETEKLVAATGVVPGIAVVIVGEDPASQVYVASKSRKAKECGFHSVQHDLPETASEQELLNLIEGLNNDPAIHGILVQLPLPGHIDSGRVIQTIAPEKDVDGFHFINVGKLGTGEVETAFVPCTPAGAMIMIERVHGRDLSGLNAVVIGRSNIVGKPMFNLLLAANATVTVAHSRTKDLPAIARNADILVAAVGRPQMVKGDWVKPGATVIDVGINRIPAPERGEG 245
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_SHEFN6.648e-5848.95Bifunctional protein folD OS=Shewanella frigidimar... [more]
FOLD_BRUSU6.648e-5848.77Bifunctional protein folD OS=Brucella suis GN=folD... [more]
FOLD_BRUSI6.648e-5848.77Bifunctional protein folD OS=Brucella suis (strain... [more]
FOLD_BRUO26.648e-5848.77Bifunctional protein folD OS=Brucella ovis (strain... [more]
FOLD_BRUME6.648e-5848.77Bifunctional protein folD OS=Brucella melitensis G... [more]
FOLD_BRUMB6.648e-5848.77Bifunctional protein folD OS=Brucella melitensis b... [more]
FOLD_BRUC26.648e-5848.77Bifunctional protein folD OS=Brucella canis (strai... [more]
FOLD_BRUAB6.648e-5848.77Bifunctional protein folD OS=Brucella abortus GN=f... [more]
FOLD_BRUA26.648e-5848.77Bifunctional protein folD OS=Brucella abortus (str... [more]
FOLD_BRUA16.648e-5848.77Bifunctional protein folD OS=Brucella abortus (str... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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