CK932965

Overview
NameCK932965
Unique NameCK932965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932965_ssr83 microsatellite CK932965_ssr83:83..109. BLAST: Citrus ESTs to Prunus persica proteins V1
CK932965_ssr105 microsatellite CK932965_ssr105:105..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 2.463e-95
Identity = 174/225 (77.33%), Postives = 192/225 (85.33%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA--------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +DY DPPPAPLID+ EL  WS YRA+IAEFVATLLFLY++VATVIG+K Q+DA        C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RA+ YM AQ LGAICGV LVK F    Y   GGGAN V++GY+ G+ L AEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPIT TGINPARS GAAV+
Sbjct:   18 RDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVV 242          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 4.201e-95
Identity = 173/228 (75.88%), Postives = 191/228 (83.77%), Query Frame = 2
Query:  152 RHHHGKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDA------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            R   GKDY DPPP PL D  EL  WSFYRALIAEF+ATLLFLYV++ TVIG+K Q+D       C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKV+L+RAV YMVAQCLGAICGV LVKAF    +   GGGAN ++ GY+ G+ + AEI+GTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   10 RSFSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAII 237          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.035e-93
Identity = 167/217 (76.96%), Postives = 184/217 (84.79%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  EL  WSFYRA IAEF+AT LFLY++V TV+G K+  + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAICG G+VK F    Y +LGGGANTVA GY KGS LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 246          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 3.010e-93
Identity = 166/217 (76.50%), Postives = 184/217 (84.79%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAP  +  EL  WSFYRA IAEF+AT LFLY++V TV+G K+  + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK F  + Y +LGGGANTVA GY KGS LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   29 KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 245          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 8.759e-93
Identity = 164/217 (75.58%), Postives = 185/217 (85.25%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  EL  WSF+RA IAEF+AT LFLY++V TV+G K+  + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK F   +Y +LGGGANT+A GY KGS LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   29 KDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 245          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.328e-92
Identity = 163/217 (75.12%), Postives = 184/217 (84.79%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAP  +  EL  WSF+RA IAEF+AT LFLY++V TV+G K+  + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F   +Y +LGGGANTVA GY KGS LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   29 KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 245          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.328e-92
Identity = 163/217 (75.12%), Postives = 184/217 (84.79%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAP  +  EL  WSF+RA IAEF+AT LFLY++V TV+G K+  + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F   +Y +LGGGANTVA GY KGS LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   29 KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 245          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.265e-91
Identity = 163/217 (75.12%), Postives = 180/217 (82.95%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  EL  WSFYRA IAEF+AT LFLY+++ TV+G K+    C  VG+ G+AWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAICG G+VK FM   Y  LGGGAN V  GY KG  LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 246          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 336.265 bits (861), Expect = 1.265e-91
Identity = 165/217 (76.04%), Postives = 182/217 (83.87%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAP  +  ELK WSFYRA IAEF+AT LFLYV+V TV+G K+  + C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F    Y + GGGAN VA GY KGS LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   30 KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 246          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.652e-91
Identity = 163/217 (75.12%), Postives = 182/217 (83.87%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  ELK WSFYRA IAEFVAT LFLY+++ TV+G  K S  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F +  Y   GGGAN VASGY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 248          
The following BLAST results are available for this feature:
BLAST of CK932965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
PIP26_MAIZE2.463e-9577.33Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP25_ARATH4.201e-9575.88Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH1.035e-9376.96Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH3.010e-9376.50Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP12_ARATH8.759e-9375.58Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA3.328e-9275.12Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH3.328e-9275.12Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP1_SOLLC1.265e-9175.12Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP15_ARATH1.265e-9176.04Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP11_ORYSJ1.652e-9175.12Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932965 ID=CK932965; Name=CK932965; organism=Citrus sinensis; type=EST; length=819bp
GGGGACAGACGCTACCTTTTCTCGAGACCAGAGAGGGTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACAAACTCA
CCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCACCACTCA
TTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTCATAGCC
GAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCACTGTCAT
TGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTTTGGGTA
TTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGCACCGCT
GGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTT
GGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGT
GCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCAT
GAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAA
CAAAGGATCAGCCTTGGGTGCTGAGATTATGGGTACCTTCGTGCTTGTTT
ACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCAC
GTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCA
CTTGGCCACCATCCCCATCACNNNNACGGGCATCAACCCTGCTAGGAGCT
TTGGTGCTGCTGTTATCTA
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