CK932965

Overview
NameCK932965
Unique NameCK932965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932965_ssr83 microsatellite CK932965_ssr83:83..109. BLAST: Citrus ESTs to Prunus persica proteins V1
CK932965_ssr105 microsatellite CK932965_ssr105:105..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 334.339 bits (856), Expect = 4.806e-91
Identity = 162/217 (74.65%), Postives = 181/217 (83.41%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  ELK WSFYRA IAEF+AT LFLY++V TV+G    +  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAICG G+VK F K  Y + GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 247          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.071e-90
Identity = 163/217 (75.12%), Postives = 179/217 (82.49%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  EL  WSFYRA IAEFVAT LFLY+S+ TV+G  K S  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAICG G+VK F +  Y   GGGAN V  GY KG  LGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA++
Sbjct:   31 KDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIV 247          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.398e-90
Identity = 161/217 (74.19%), Postives = 181/217 (83.41%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  ELK WSFYRA IAEFVAT LFLY++V TV+G  K +  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG G+VK F +  Y   GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   35 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 251          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 332.028 bits (850), Expect = 2.385e-90
Identity = 161/218 (73.85%), Postives = 184/218 (84.40%), Query Frame = 2
Query:  173 YVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQS---DACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            Y DPPPAPL+D +EL  WS YRALIAEF+ATL+FLYVS+ATVIG+K Q    DAC GVG LG+AW+FG  IFVLVYCT G+SGGHINPAVT GLF  RK+SL+R V Y+VAQCLGAI G G+VK  MK  Y++LGGGANTV+ GY+   ALGAEI+GTF+LVYTVFSATDPKR+ARDS +PVL PLPIGFAVF+VHLATIPIT TGINPARS GAAV+
Sbjct:   23 YWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVL 240          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.069e-90
Identity = 162/218 (74.31%), Postives = 180/218 (82.57%), Query Frame = 2
Query:  164 GKDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            G+DY +PP APL + +EL  WSFYRA IAEFVAT LFLYV+V TV+G  K    CG VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+CG G+VKAF    Y S GGGAN V+ GY KG  LGAE++GTFVLVYTVFSATD KR+ARDSHVP LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   36 GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 253          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.069e-90
Identity = 159/217 (73.27%), Postives = 181/217 (83.41%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  ELK WSFYRA IAEFVAT LFLY+++ TV+G  K +  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+CG G+VK F +  Y   GGGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA+I
Sbjct:   32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII 248          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 1.002e-88
Identity = 161/218 (73.85%), Postives = 181/218 (83.03%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFM-KHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL + +EL  WSFYRA IAEF+AT LFLY++V TV+G  ++S  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAICG G+VK F  K  +  L GGAN VA GY KG  LGAEI+GTF+LVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA++
Sbjct:   32 KDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIV 249          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 1.002e-88
Identity = 159/217 (73.27%), Postives = 178/217 (82.03%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PP AP+ ++ EL  WSFYRA IAEFVAT LFLY+S+ TV+G  K +  C  VG+ GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM  QCLGAICG G+VK F +  Y   GGGAN V  GY KG  LGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPIT TGINPARS GAA++
Sbjct:   31 KDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIV 247          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 3.336e-84
Identity = 156/217 (71.89%), Postives = 174/217 (80.18%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY +PPPAPL +  ELK WSFYR  IAEFVAT LFLY+S+ TV+G  K +  C  VG+ GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAICG G+VK F +  Y   GG  N VA GY KG  LGAEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLPIGFAVF+VHLAT+ IT TGINPARS GAAVI
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVI 246          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 6.956e-82
Identity = 152/218 (69.72%), Postives = 177/218 (81.19%), Query Frame = 2
Query:  167 KDYVDPPPAPLIDMAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            KDY DPPPAPL+D  EL  WS YRA IAEF ATLL + +SV+TVIG K+QS   GG G+LGIAWAFGG+IFVLVYCTAGISGGH+NPAVTF + LAR+VSL RA  Y +AQC+GA+CG GL +A     +Y   GGGAN +A+GY+ G+ + AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLPIG AV +VHLATIPIT TGINPARS G A++
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGE-GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALV 228          
The following BLAST results are available for this feature:
BLAST of CK932965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
PIP12_ORYSJ4.806e-9174.65Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP15_MAIZE1.071e-9075.12Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP13_MAIZE1.398e-9074.19Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP27_ORYSJ2.385e-9073.85Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE4.069e-9074.31Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP12_MAIZE4.069e-9073.27Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP2_PEA1.002e-8873.85Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP13_ORYSJ1.002e-8873.27Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP11_MAIZE3.336e-8471.89Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP28_ORYSJ6.956e-8269.72Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932965 ID=CK932965; Name=CK932965; organism=Citrus sinensis; type=EST; length=819bp
GGGGACAGACGCTACCTTTTCTCGAGACCAGAGAGGGTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACAAACTCA
CCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCACCACTCA
TTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTCATAGCC
GAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCACTGTCAT
TGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTTTGGGTA
TTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGCACCGCT
GGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTT
GGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGT
GCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCAT
GAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAA
CAAAGGATCAGCCTTGGGTGCTGAGATTATGGGTACCTTCGTGCTTGTTT
ACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCAC
GTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCA
CTTGGCCACCATCCCCATCACNNNNACGGGCATCAACCCTGCTAGGAGCT
TTGGTGCTGCTGTTATCTA
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