CK932965

Overview
NameCK932965
Unique NameCK932965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932965_ssr83 microsatellite CK932965_ssr83:83..109. BLAST: Citrus ESTs to Prunus persica proteins V1
CK932965_ssr105 microsatellite CK932965_ssr105:105..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 2.680e-33
Identity = 87/208 (41.83%), Postives = 124/208 (59.62%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHK---KQSDACGGV-GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E K   F+RA++AEF+A +LF+++S+ + +G     K +   G V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+ Y++AQC+GAI    ++         NSL  G N +A G N G  LG EI+GT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  T  GINPARSFG++VI
Sbjct:    3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI 204          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 3.501e-33
Identity = 87/208 (41.83%), Postives = 124/208 (59.62%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHK---KQSDACGGV-GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E K   F+RA++AEF+A +LF+++S+ + +G     K +   G V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+ Y++AQC+GAI    ++         NSL  G N +A G N G  LG EI+GT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  T  GINPARSFG++VI
Sbjct:    3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI 205          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 7.799e-33
Identity = 87/208 (41.83%), Postives = 125/208 (60.10%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHK---KQSDACGGV-GLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E K   F+RA++AEF+A  LF+++S+ + +G +   + +   G     + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAV Y++AQC+GAI    ++         NSL  G N++A G + G  LG EI+GT  LV  V + TD +R  RD  +   APL IGF+V + HL  I  T  GINPARSFG+AVI
Sbjct:    3 SEFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI 204          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 7.799e-33
Identity = 87/206 (42.23%), Postives = 122/206 (59.22%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQ--SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E K   F+RA++AEF+AT LF+++S+ + +G K    ++       + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++AQC+GAI    ++         NSL  G N +A G N G  LG EI+GT  LV  V + TD +R  RD  +   APL IG +V + HL  I  T  GINPARSFG+AVI
Sbjct:    3 SEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI 202          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 2.964e-32
Identity = 85/208 (40.87%), Postives = 121/208 (58.17%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIGH----KKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E K   F+RA++AEF+A +LF+++S+ + +G     +    A      + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAV Y++AQC+GAI    ++         NSL  G N +A G N G  LG EI+GT  LV  V + TD +R  RD  +    PL IG +V + HL  I  T  GINPARSFG++VI
Sbjct:    3 SEFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI 204          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 3.870e-32
Identity = 86/206 (41.75%), Postives = 121/206 (58.74%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQ--SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E K   F+RA++AEF+A  LF+++S+ + +G K    ++       + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++AQC+GAI    ++         NSL  G N +A G N G  LG EI+GT  LV  V + TD +R  RD  +   APL IG +V + HL  I  T  GINPARSFG+AVI
Sbjct:    3 SEFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI 202          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 6.602e-32
Identity = 87/209 (41.63%), Postives = 123/209 (58.85%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIG-----HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E+K   F+RA++AEF+A  LF+++S+ + +G      + Q+     V    ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAV Y++AQC+GAI    ++         NSL  G N +A G N G  LG EI+GT  LV  V + TD +R  RD  +   APL IG +V + HL  I  T  GINPARSFG+AV+
Sbjct:    3 SEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL 202          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 137.117 bits (344), Expect = 1.126e-31
Identity = 87/209 (41.63%), Postives = 123/209 (58.85%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIG-----HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY-NSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E+K   F+RA++AEF+A  LF+++S+ + +G      + Q+     V    ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAV Y++AQC+GAI    ++         NSL  G N +A G N G  LG EI+GT  LV  V + TD +R  RD  +   APL IG +V + HL  I  T  GINPARSFG+AV+
Sbjct:    3 SEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL 202          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.277e-31
Identity = 80/210 (38.10%), Postives = 122/210 (58.10%), Query Frame = 2
Query:  209 AELKLWSFYRALIAEFVATLLFLYVSVATVIG-----HKKQSDACG-GVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKH-EYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +E K  +F+RA+IAEF+A +LF+++S+   +G      +K +   G    ++ ++ AFG  I  +      +SG H+NPAVT G  L+ ++S+++AV Y++AQCLGA+    ++       E NSL  G N ++ G + G  LG EI+ TF LV  V + TD +R      V    PL IG +V + HL  I  T  G+NPARSFG+AV+
Sbjct:    3 SEFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSV----PLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL 206          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.377e-29
Identity = 81/198 (40.91%), Postives = 116/198 (58.59%), Query Frame = 2
Query:  227 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +F++A+ AEF+A L+F+ +SV + I      +    V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++  ++    N +GG G  TV      G  L  E++ TF LV+T+F++ D KR    + V     L IGF+V + HL  I  T   +NPARSFG AVI
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVI 226          
The following BLAST results are available for this feature:
BLAST of CK932965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
AQP1_BOVIN2.680e-3341.83Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP3.501e-3341.83Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_PIG7.799e-3341.83Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN7.799e-3342.23Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_CANFA2.964e-3240.87Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_PONAB3.870e-3241.75Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE6.602e-3241.63Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT1.126e-3141.63Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQPA_RANES3.277e-3138.10Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_NOTAL1.377e-2940.91Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932965 ID=CK932965; Name=CK932965; organism=Citrus sinensis; type=EST; length=819bp
GGGGACAGACGCTACCTTTTCTCGAGACCAGAGAGGGTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACAAACTCA
CCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCACCACTCA
TTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTCATAGCC
GAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCACTGTCAT
TGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTTTGGGTA
TTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGCACCGCT
GGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTT
GGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGT
GCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCAT
GAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAA
CAAAGGATCAGCCTTGGGTGCTGAGATTATGGGTACCTTCGTGCTTGTTT
ACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCAC
GTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCA
CTTGGCCACCATCCCCATCACNNNNACGGGCATCAACCCTGCTAGGAGCT
TTGGTGCTGCTGTTATCTA
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