CK932965

Overview
NameCK932965
Unique NameCK932965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932965_ssr83 microsatellite CK932965_ssr83:83..109. BLAST: Citrus ESTs to Prunus persica proteins V1
CK932965_ssr105 microsatellite CK932965_ssr105:105..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9730 contig Csv1_Contig9730:1..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23
Identity = 69/204 (33.82%), Postives = 104/204 (50.98%), Query Frame = 2
Query:  206 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            M E + +SF+RA+ AEF  T+ +++  +   +       A G   +L IA AFG ++  +V     +SG HINPAVTF   +  ++SL RA+ Y+ AQ LGA+ G  ++               NT+  G + G A   EI  T   V  +F+  D +R+ R   V     L IGF++ + HL  +  T   +NPARSF  AV+
Sbjct:    1 MWEFRSFSFWRAVFAEFFGTMFYVFFGLGASLKW-----AAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRG-NLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVL 194          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23
Identity = 67/196 (34.18%), Postives = 102/196 (52.04%), Query Frame = 2
Query:  227 SFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAV 814
            + +R L AE + TLL + +   +  G +       G  ++ IA  FG +I  +V C   +SG HINPAVT GL +   +S+++A+ Y++ QC+GAI G  ++K     E+        ++A G         E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  T + +NPARSFG AV
Sbjct:   24 TIWRCLAAELIGTLLLVLIGTGSCTGVQISE----GDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGT-LCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV 210          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.289e-23
Identity = 73/204 (35.78%), Postives = 105/204 (51.47%), Query Frame = 2
Query:  206 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            M EL+  +F RA+ AEF+ATLLF++  + + +   +   +     +L IA AFG  I  LV     ISG HINPAVT    +   VS++RA  Y+ AQ LGA+ G  L+      +        N +++    G A+  E+  T  LV  +F++TD +R       P    L IGF+V + HL  I  T   +NPARS   AV+
Sbjct:    1 MWELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRG-DLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVV 194          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.316e-23
Identity = 73/204 (35.78%), Postives = 110/204 (53.92%), Query Frame = 2
Query:  236 RALIAEFVATLLFLYVSVATVIGHKKQ---------SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            RA +AEF++T +F++    +++   K          ++  GG+ L+ +A A    +F  V     +SGGH+NPAVTF   +  ++S+IRA+ Y VAQ +GAI    L    ++   N L      VASG ++   L  EI+ TF LVY V+S A DPKR +    + ++APL IG  V    L   P     +NPAR+FG A++
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALA--LFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAI----LACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV 217          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.555e-23
Identity = 71/197 (36.04%), Postives = 109/197 (55.33%), Query Frame = 2
Query:  236 RALIAEFVATLLFLYVSVATVIGHKKQSD--ACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            +A +AEF++T +F++    + I + K ++  A    GL+  + A    +FV V   A ISGGH+NPAV FG F+   ++L+R + Y++AQ LG+I    L+         + G     ++ G   G AL  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ IGF V    L     T   +NPA SFG AV+
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV 207          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.248e-22
Identity = 72/204 (35.29%), Postives = 111/204 (54.41%), Query Frame = 2
Query:  236 RALIAEFVATLLFLYVSVATVIGHKKQ---------SDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            RA +AEF++T +F++ +  +++   K          ++  GG+ L+ +A AF   +F  V     +SGGH+NPAVTFG  +  +V+ IRA+ Y +AQ LGAI    L    ++   N +      +ASG    + L  EI+ TF LVY V+S   DPKR +    + ++APL IG  V    L   P +   +NPAR+FG A++
Sbjct:   24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAI----LACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV 217          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22
Identity = 70/196 (35.71%), Postives = 104/196 (53.06%), Query Frame = 2
Query:  236 RALIAEFVATLLFLYVSVATVIG-HKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            RA I+EF+AT +F++ +  +++   K   D     GL+ ++ A    + V V     ISGGH+NPA+TFG  L  ++SLIRA+ Y +AQ LGA+    L++         +      +ASG     A+  E   TF L+Y  ++   DPKR     HV  +APL +GF +    LA  P    G+NPAR FG A++
Sbjct:   27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRL----TTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALV 214          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22
Identity = 65/200 (32.50%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  233 YRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV------KAFMKHEYNSLGGGANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAV 814
            ++ L AEF+ T   +     + +          G+GLLG+++AFG  +  + Y   GISGGH NPAV+ GL +A +V     V+Y++AQ  GAI    ++      KA  +    +  G       GY+  +AL  E++ TF  +  +  +T  +  A        AP+ IG A+ ++HL +IP+T T +NPARS G A+
Sbjct:    2 FKKLCAEFLGTCWLVLGGCGSAVLASAFPQV--GIGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQAL 193          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22
Identity = 70/200 (35.00%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  236 RALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGG--ANTVA----SGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITXTGINPARSFGAAV 814
            R  I+EF+ T   ++    + +      +   G+G LG+A+AFG  +  + Y   GISGGH NPAV+ GL +A K      V Y+VAQ LGA+     +   +  +  +  GG  AN        GY+  SAL  EI+ T   +  +  +T          VPV  AP+ IG A+ ++HL +IP+T T +NPARS G A+
Sbjct:    3 RKFISEFLGTFWLVFGGCGSAVFAAAFPEL--GIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGST-------HGRVPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQAL 193          
BLAST of CK932965 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.129e-22
Identity = 76/208 (36.54%), Postives = 111/208 (53.37%), Query Frame = 2
Query:  206 MAELKLWSFYRALIAEFVATLLFLYVSVATVIGHKKQSDACGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYN--SLGG--GANTVASGYNKGSALGAEIMGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITXTGINPARSFGAAVI 817
            M EL+  +F RA++AEF+ATLLF++  + + +   +   +     +L IA AFG  I  LV     +SG HINPAVT    +   VS +RAV Y+ AQ LGA+ G  L+     HE    ++ G    N + +    G A+  E+  T  LV  +F++TD +R     +V   A L IGF+V + HL  I  T   +NPARS   A++
Sbjct:    1 MWELRSIAFSRAVLAEFLATLLFVFFGLGSALNWPQALPS-----VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL-----HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRG---DNVGTPA-LSIGFSVALGHLLGIHYTGCSMNPARSLAPAIV 194          
The following BLAST results are available for this feature:
BLAST of CK932965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
MIP_RANPI4.289e-2333.82Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP_CICVR4.289e-2334.18Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP2_HUMAN4.289e-2335.78Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
TIP32_ARATH7.316e-2335.78Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP1_MEDSA9.555e-2336.04Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP31_ARATH1.248e-2235.29Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP31_ORYSJ2.129e-2235.71Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQPZ2_RHIME2.129e-2232.50Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
AQPZ1_AGRT52.129e-2235.00Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
AQP2_BOVIN2.129e-2236.54Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932965 ID=CK932965; Name=CK932965; organism=Citrus sinensis; type=EST; length=819bp
GGGGACAGACGCTACCTTTTCTCGAGACCAGAGAGGGTGTGTGCTTTTCT
TTGATTGTTCCAAAGAGAAATCAAAATCTTGTGAAGAAGAAGAAGAAGAA
GAAGAAGAAAGAAAGATGTCAAAGGAAGTGAATGAAGAAGGACAAACTCA
CCGCCATCACCATGGCAAGGACTACGTGGACCCACCACCAGCACCACTCA
TTGACATGGCTGAGCTCAAGCTCTGGTCCTTTTACAGAGCTCTCATAGCC
GAGTTCGTGGCCACTCTCCTCTTCCTCTACGTCAGTGTTGCCACTGTCAT
TGGCCACAAGAAACAAAGTGATGCCTGTGGTGGTGTTGGCCTTTTGGGTA
TTGCATGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGCACCGCT
GGCATTTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTT
GGCAAGGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGT
GCTTGGGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCAT
GAGTACAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAA
CAAAGGATCAGCCTTGGGTGCTGAGATTATGGGTACCTTCGTGCTTGTTT
ACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCAC
GTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCA
CTTGGCCACCATCCCCATCACNNNNACGGGCATCAACCCTGCTAGGAGCT
TTGGTGCTGCTGTTATCTA
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