CK932973

Overview
NameCK932973
Unique NameCK932973
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932973_ssr470 microsatellite CK932973_ssr470:470..481. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9684 contig Csv1_Contig9684:168..802. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YIPP_DROME (Protein yippee OS=Drosophila melanogaster GN=Yippee PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 2
Query:   98 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILE 373
            G   F+C  C   L     LIS  F   TG+AY+F   +N+     +++ M+TG + +  + C NCG +LGW Y  A +  QK+KEG  ILE
Sbjct:   11 GLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILE 102          
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YPEL5_PONAB (Protein yippee-like 5 OS=Pongo abelii GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 2
Query:   98 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 376
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YPEL5_MOUSE (Protein yippee-like 5 OS=Mus musculus GN=Ypel5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 2
Query:   98 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 376
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YPEL5_HUMAN (Protein yippee-like 5 OS=Homo sapiens GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 2
Query:   98 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 376
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YPEL5_CERAE (Protein yippee-like 5 OS=Cercopithecus aethiops GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 2
Query:   98 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 376
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YPEL5_BOVIN (Protein yippee-like 5 OS=Bos taurus GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 2
Query:   98 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 376
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDTILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YPEL5_MACFA (Protein yippee-like 5 OS=Macaca fascicularis GN=YPEL5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.288e-13
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 2
Query:   98 GRPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILEK 376
            G   FSC NC   L    +LIS  F   TG+A++F+  +N+     +D+ M+TG + +  + C NC  +LGW Y  A +  Q++KEG  ILE+
Sbjct:   11 GTRLFSCANCDAILTNRSELISTRFTGATGRAFLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQRYKEGRVILER 103          
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YPL2_CAEEL (Protein yippee-like B0546.4 OS=Caenorhabditis elegans GN=B0546.4 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12
Identity = 35/88 (39.77%), Postives = 47/88 (53.41%), Query Frame = 2
Query:  110 FSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILE 373
            + C  C   L    +L SK F   TG A +F  A NVV GR E ++M TG +T+  ++C  C Q+LGW Y  A    Q +KE   I+E
Sbjct:   16 YGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRCEHRKMTTGWHTVRDVFCVTCNQKLGWMYEMAVSESQTYKETQVIIE 103          
BLAST of CK932973 vs. ExPASy Swiss-Prot
Match: YIPL_SCHPO (Protein yippee-like PJ691.02 OS=Schizosaccharomyces pombe GN=SPAPJ691.02 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.804e-11
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 2
Query:  110 FSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGIYTIAKIYCSNCGQELGWHYLRAYDLKQKWKEGNFILE 373
            + C  C   LAF   L+S  ++ + G A +F    NV+    + +QM TG + +  I+C  C   +GW Y+ +Y+  QK+K+G++ILE
Sbjct:   14 YVCAKCKTHLAFKGHLLSHDYRGKNGPACLFKRVENVIEMEPKTEQMSTGRFIVRHIHCCRCHTYIGWKYVSSYEPSQKFKDGHYILE 101          
The following BLAST results are available for this feature:
BLAST of CK932973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
YIPP_DROME1.476e-1338.04Protein yippee OS=Drosophila melanogaster GN=Yippe... [more]
YPEL5_PONAB1.928e-1337.63Protein yippee-like 5 OS=Pongo abelii GN=YPEL5 PE=... [more]
YPEL5_MOUSE1.928e-1337.63Protein yippee-like 5 OS=Mus musculus GN=Ypel5 PE=... [more]
YPEL5_HUMAN1.928e-1337.63Protein yippee-like 5 OS=Homo sapiens GN=YPEL5 PE=... [more]
YPEL5_CERAE1.928e-1337.63Protein yippee-like 5 OS=Cercopithecus aethiops GN... [more]
YPEL5_BOVIN1.928e-1337.63Protein yippee-like 5 OS=Bos taurus GN=YPEL5 PE=2 ... [more]
YPEL5_MACFA3.288e-1337.63Protein yippee-like 5 OS=Macaca fascicularis GN=YP... [more]
YPL2_CAEEL4.748e-1239.77Protein yippee-like B0546.4 OS=Caenorhabditis eleg... [more]
YIPL_SCHPO1.804e-1134.09Protein yippee-like PJ691.02 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932973 ID=CK932973; Name=CK932973; organism=Citrus sinensis; type=EST; length=629bp
GGGCTCTTTAAATAACGCTCTCTTCTCCTCTCATCTGTTGTTGGTTCCAG
TCTTAAGCAGATCAGTTTTTGGTTTCAGTTAAATGGCAGAGTTCGATGGT
CGTCCCTTCTTCAGTTGCAGAAATTGTCTTAATCCACTTGCCTTTCACCA
TGATCTTATTTCCAAAACTTTTAAGGCACAAACAGGACAGGCCTACATGT
TTAGTAATGCAATGAATGTAGTTCTGGGAAGAAAGGAGGATAAGCAAATG
ATAACAGGCATTTACACAATTGCCAAAATCTATTGCAGCAATTGTGGGCA
GGAATTGGGTTGGCATTATTTGCGAGCTTATGATCTCAAACAAAAATGGA
AGGAAGGCAATTTCATTCTCGAGAAATTCAAGATGCTTAAAGAATACAAG
TAGCCCTCTATTTTATTGCAACAAAATAATGCCATCAAAGCAAGTTTTCA
AGTTCTATGCAAGTATGTATGTGTGTGTGTGCATCTTGGACTTGGAAGAA
AATTTGTGTACTCCATGCACTTCTTTCATTAGATGTATGCATATAATAAG
AGTTTATTGAAAGAGAGTGTATACATGAAGGGTAATCAAATTTTTCTCGT
AGAAAAAAAAAAAAAAAAAAAAAAAAAAA
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