CK932976

Overview
NameCK932976
Unique NameCK932976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig888 contig Csv1_Contig888:59..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_PROCL (40S ribosomal protein S14 OS=Procambarus clarkii GN=RPS14 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.807e-48
Identity = 98/140 (70.00%), Postives = 110/140 (78.57%), Query Frame = 2
Query:   26 MSRRKNREPKEE-NVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            M+ RK +  KEE  V LGP V DGE VF V HI+AS+NDTF+HVTDLSGRET+VRITGG KVKADRDESSPYAAMLAAQDV+ +CK LGI  LHIK+RA             QSALRALAR+GMKIGRIEDVTP+P+DST
Sbjct:    1 MAPRKGKVQKEEVQVQLGPQVLDGEKVFAVCHIYASYNDTFVHVTDLSGRETIVRITGGQKVKADRDESSPYAAMLAAQDVAEKCKSLGINCLHIKIRATGGNKTKTPGPGGQSALRALARAGMKIGRIEDVTPVPSDST 140          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_SCHPO (40S ribosomal protein S14 OS=Schizosaccharomyces pombe GN=rps14a PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.981e-47
Identity = 91/124 (73.39%), Postives = 106/124 (85.48%), Query Frame = 2
Query:   71 LGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            +GP +R GE VFGVAHIFASFNDTF+H+TDL+G+ET+VR+TGGMKVK DRDESSPYAAMLAAQD + +CKE+GITALHIK+RA            AQ+ALRALAR+GM+IGRIEDVTPIPTDST
Sbjct:    5 VGPQIRSGELVFGVAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDAAAKCKEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIEDVTPIPTDST 128          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_DICDI (40S ribosomal protein S14 OS=Dictyostelium discoideum GN=rps14 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.130e-45
Identity = 94/132 (71.21%), Postives = 104/132 (78.79%), Query Frame = 2
Query:   47 EPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            E     +  GP+    E VFGVAHIFASFNDTF+HVTDLS +ET+VR+TGGMKVK DRDESSPYAA +AAQDV+ RCKELG+TALHIKLRA            AQSALRALARSGM+IGRIEDVTPIPTDST
Sbjct:   14 EALSAKIPCGPS----ELVFGVAHIFASFNDTFVHVTDLSSKETIVRVTGGMKVKTDRDESSPYAATMAAQDVALRCKELGVTALHIKLRATGGNGSKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDST 141          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_KLULA (40S ribosomal protein S14 OS=Kluyveromyces lactis GN=RPS14 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.963e-44
Identity = 86/119 (72.27%), Postives = 100/119 (84.03%), Query Frame = 2
Query:   86 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            +D   VFGVA IFASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKE+GITA+HIK+RA             Q+ALRALARSG++IGRIEDVTP+P+DST
Sbjct:    8 KDNSQVFGVARIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHIKIRATGGTRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDST 126          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14B_YEAST (40S ribosomal protein S14-B OS=Saccharomyces cerevisiae GN=RPS14B PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.735e-43
Identity = 84/119 (70.59%), Postives = 100/119 (84.03%), Query Frame = 2
Query:   86 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            RD   VFGVA I+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKE+GITA+H+K+RA             Q+ALRALARSG++IGRIEDVTP+P+DST
Sbjct:    9 RDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDST 127          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14A_YEAST (40S ribosomal protein S14-A OS=Saccharomyces cerevisiae GN=RPS14A PE=1 SV=5)

HSP 1 Score: 176.022 bits (445), Expect = 1.735e-43
Identity = 84/119 (70.59%), Postives = 100/119 (84.03%), Query Frame = 2
Query:   86 RDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            RD   VFGVA I+ASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKE+GITA+H+K+RA             Q+ALRALARSG++IGRIEDVTP+P+DST
Sbjct:    8 RDNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDST 126          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_CANAL (40S ribosomal protein S14 OS=Candida albicans GN=RPS14 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43
Identity = 86/114 (75.44%), Postives = 98/114 (85.96%), Query Frame = 2
Query:  101 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            VFGVA IFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKE+GITA+HIKLRA             QSALRALARSG++IGRIEDVTP+P+DST
Sbjct:   10 VFGVARIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHIKLRATGGTKTKTPGPGGQSALRALARSGLRIGRIEDVTPVPSDST 123          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_TRYBB (40S ribosomal protein S14 OS=Trypanosoma brucei brucei GN=RPS14 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.593e-43
Identity = 86/130 (66.15%), Postives = 101/130 (77.69%), Query Frame = 2
Query:   53 KEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            K+E    G +    + V+GV HI+ASFNDTF+HVTD+SGRET  ++TGGMKVKADRDESSPYAAM+AAQDV  RCKE GI ALH+K+RA            AQ+ALRALAR+GMKIGRIEDVTP+PTDST
Sbjct:    4 KQEVKYYGSSAGKDQLVYGVVHIYASFNDTFVHVTDMSGRETFCKVTGGMKVKADRDESSPYAAMMAAQDVVARCKECGINALHVKMRATGGVGTKSPGPGAQAALRALARAGMKIGRIEDVTPVPTDST 133          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_TORRU (40S ribosomal protein S14 OS=Tortula ruralis GN=RPS14 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.582e-42
Identity = 89/114 (78.07%), Postives = 97/114 (85.09%), Query Frame = 2
Query:  101 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            VFGVAHIFASFNDTF+HVTDLSG+ET + +TGGMKVKADRDE+SPYAAMLAAQDV+ RCKELGITALHI +RA            AQS LRALARSGM+IGRIEDVTPIPTDST
Sbjct:   11 VFGVAHIFASFNDTFVHVTDLSGKETSLVLTGGMKVKADRDEASPYAAMLAAQDVAQRCKELGITALHINVRATGGNKTKTPGPGAQS-LRALARSGMRIGRIEDVTPIPTDST 123          
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_THESM (30S ribosomal protein S11P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps11p PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31
Identity = 65/113 (57.52%), Postives = 85/113 (75.22%), Query Frame = 2
Query:  104 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            +GVAHI+AS+N+T IH+TDL+G ET+ + +GGM VKADRDESSPYAAM+AA+  +    E GI  +HIK+RA            AQ+A+RALAR+G++IGR+EDVTPIP D T
Sbjct:   16 WGVAHIYASYNNTIIHITDLTGAETISKWSGGMVVKADRDESSPYAAMIAARRAAEEAMEKGINGVHIKVRAPGGSKSKNPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGT 128          
The following BLAST results are available for this feature:
BLAST of CK932976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
RS14_PROCL6.807e-4870.0040S ribosomal protein S14 OS=Procambarus clarkii G... [more]
RS14_SCHPO1.981e-4773.3940S ribosomal protein S14 OS=Schizosaccharomyces p... [more]
RS14_DICDI4.130e-4571.2140S ribosomal protein S14 OS=Dictyostelium discoid... [more]
RS14_KLULA5.963e-4472.2740S ribosomal protein S14 OS=Kluyveromyces lactis ... [more]
RS14B_YEAST1.735e-4370.5940S ribosomal protein S14-B OS=Saccharomyces cerev... [more]
RS14A_YEAST1.735e-4370.5940S ribosomal protein S14-A OS=Saccharomyces cerev... [more]
RS14_CANAL2.960e-4375.4440S ribosomal protein S14 OS=Candida albicans GN=R... [more]
RS14_TRYBB6.593e-4366.1540S ribosomal protein S14 OS=Trypanosoma brucei br... [more]
RS14_TORRU5.582e-4278.0740S ribosomal protein S14 OS=Tortula ruralis GN=RP... [more]
RS11_THESM9.875e-3157.5230S ribosomal protein S11P OS=Thermococcus sibiric... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932976 ID=CK932976; Name=CK932976; organism=Citrus sinensis; type=EST; length=717bp
GGGTCCATCTCGTGTCTTCGCAGGCATGTCGAGGAGAAAGAATAGGGAGC
CTAAGGAAGAGAATGTGACTCTAGGACCTGCTGTGAGAGATGGGGAGCAT
GTTTTTGGAGTTGCCCACATCTTTGCATCGTTCAATGATACATTTATTCA
TGTGACTGATCTGTCAGGCAGAGAAACCCTTGTCCGTATCACTGGTGGTA
TGAAGGTGAAAGCTGACCGAGATGAGTCCTCTCCATACGCTGCCATGCTT
GCAGCACAAGATGTTTCAACCAGATGCAAGGAGCTTGGAATCACTGCTCT
TCATATTAAGCTGCGTGCTACTGGTGGGAACAAAACCAAAACACCTGGTC
CAGGTGCCCAGTCTGCTCTTCGTGCCCTTGCTCGTTCTGGGATGAAAATT
GGTCGCATAGAGGATGTGACCCCTATTCCCACTGATAGCACACGCAGAAA
GGGTGGTAGAAGAGGAAGAAGGCTTTAAGCTGTGTTGTTTGTCCGATTGT
CTTGTTTTATGCGGGCATTCTGAATGGGACAGTTGTTCCTTAAAGTTAGT
TGAAGTTACTTTTCAATTTTGGAACTAATTTATAGTTTTATCTGTCGCTA
TTAAAAGATTTTATTTTCCTGCTTTTTGTAAAAACAATAGGCGGCCTTGA
GAGCATATGGCATTACTGGTGTCTTGCATTGCGTGTTGAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
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