CK932976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_THEVO (30S ribosomal protein S11P OS=Thermoplasma volcanium GN=rps11p PE=3 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 7.324e-26 Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 107 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442 G+AHI+AS N+T IHVTD +G ET+ ++GGM VK DRD++SPYAAM AA VS KE IT L IK+RA AQ+A+RAL+R+G+KI RIE+VTPIP D T Sbjct: 10 GIAHIYASQNNTIIHVTDPTGAETIAMVSGGMVVKNDRDQASPYAAMKAADMVSETLKEHEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGT 121
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_SULTO (30S ribosomal protein S11P OS=Sulfolobus tokodaii GN=rps11p PE=3 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 7.324e-26 Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 2 Query: 104 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 439 +G+A ++AS N+T I +TD++G E + R +GGM VKADR++ SPYAAMLAA +T + GI+A+HIK+RA AQ A+RALAR+G IGRIEDVTPIP DS Sbjct: 9 WGIARVYASQNNTLITITDITGAEIISRASGGMVVKADREKPSPYAAMLAANKAATEAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDS 120
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_METBU (30S ribosomal protein S11P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps11p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.324e-26 Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 2 Query: 101 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442 ++GVAHI SFN+T I VTDL+G ET+ + +GGM VKA RDESSPY AM A ++ ++ G+ +HIK+RA AQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 5 IWGVAHIKCSFNNTIITVTDLTGAETIAKSSGGMVVKAARDESSPYTAMQMATQLADILRDKGLEGVHIKVRAPGGNKQRSPGPGAQAAIRAFARAGVRIGRIEDVTPVPHDGT 118
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_CENSY (30S ribosomal protein S11P OS=Cenarchaeum symbiosum GN=rps11p PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 9.565e-26 Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 2 Query: 77 PAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442 P + G+AHI++S+N+T IH+TDL+G ET+ +GG+ V ADR ESSP+AAM AA V + G T HI++RA AQ+A+RALAR G +IGRI+DVTPIP D+T Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAANKVIESARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTPIPHDTT 187
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_METAC (30S ribosomal protein S11P OS=Methanosarcina acetivorans GN=rps11p PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25 Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 2 Query: 104 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + K+ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLKDKGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_NATPD (30S ribosomal protein S11P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps11p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25 Identity = 56/113 (49.56%), Postives = 81/113 (71.68%), Query Frame = 2 Query: 104 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442 +G+A+++ASFN+T I VTD++G ET+V+ +GG VK +RDE+SPYAAM A+ V+ K+ GI +H+++R AQ+ +RALAR+G++IGRIEDVTPIP D T Sbjct: 7 WGIANVYASFNNTIITVTDMTGAETIVKSSGGTVVKQNRDEASPYAAMQMAEVVAEDVKDAGIDGVHVRVRGPGGNQQQNPGPGAQATIRALARAGLEIGRIEDVTPIPHDGT 119
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_METMA (30S ribosomal protein S11P OS=Methanosarcina mazei GN=rps11p PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.635e-25 Identity = 57/113 (50.44%), Postives = 79/113 (69.91%), Query Frame = 2 Query: 104 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRDKGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_METBF (30S ribosomal protein S11P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps11p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.200e-25 Identity = 57/113 (50.44%), Postives = 79/113 (69.91%), Query Frame = 2 Query: 104 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D T Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRDKGIHGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGT 118
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_CALMQ (30S ribosomal protein S11P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps11p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.200e-25 Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 104 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 439 +G+A+I+AS N+T I +TDL+G ET+ R++GG VKADRD+ SPYAAM+AA + GI A+H+K+R A +A+RALAR+GM IGRIEDVTPIP D+ Sbjct: 9 WGIAYIYASSNNTMIIITDLTGSETVARVSGGQVVKADRDKPSPYAAMMAAYKAAQIAMARGINAVHVKVRGPGGYGLKVPGPGAVAAIRALARAGMIIGRIEDVTPIPHDT 120
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS11_PICTO (30S ribosomal protein S11P OS=Picrophilus torridus GN=rps11p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24 Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 107 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442 G+AHI+AS N+T I VTD +G ET+ + +GGM VK DRDE+SPYAAM AA VS + +E IT L I++RA AQSA+RAL+R+G KI RIE+VTPIP D T Sbjct: 5 GIAHIYASQNNTIILVTDPTGAETIAKSSGGMVVKNDRDEASPYAAMRAADMVSEKLREREITDLIIRVRAPGGSKSKIPGPGAQSAIRALSRAGFKILRIEEVTPIPHDGT 116 The following BLAST results are available for this feature:
BLAST of CK932976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932976 ID=CK932976; Name=CK932976; organism=Citrus sinensis; type=EST; length=717bpback to top |