CK932977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP230_ARATH (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11 Identity = 41/136 (30.15%), Postives = 66/136 (48.53%), Query Frame = 1 Query: 328 IFDYMLRMHPSPPPVS------SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGL 717 +FD + ++ S P + NIL+ GL ++ + + L L P++ T++ LI FC G+ F R+ + + PD TFN LI GL + R+ E L ++K GCEP+ TY ++ GL Sbjct: 182 LFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 38/131 (29.01%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 328 IFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLC 720 +FD ML + + ++N LL L K+ D +F + + GL PD +++ I I+ +C G V + R+ R + P+ TFN +I+ LC ++ +A L ++ G PD +TYN+++ C Sbjct: 230 VFDEMLERN-CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC 359
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP130_ARATH (Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana GN=At1g77405 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 56/205 (27.32%), Postives = 83/205 (40.49%), Query Frame = 1 Query: 205 DWLLLTAKVKDRASLDKFLKERCKSSGEGDINVITPNEAFCIFD---------------YMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLF--PDLFTYNILINCFCKMG-----------RVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 D L AK D L FL++ S E NV+T C+ Y ++ + P V ++N ++ L + ++ L ++ G PD +TY ILI+ +C+ G R+ F +L PD T+N LI G C +RI A LF +K GC P+ TYN+ I T I Sbjct: 132 DMACLLAKGNDFKGLWDFLRQ--VSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEI 334
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR42_ARATH (Putative pentatricopeptide repeat-containing protein At1g13800 OS=Arabidopsis thaliana GN=At1g13800 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 34/93 (36.56%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 469 PDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 PD+F Y +LI+ CK+G + F +++ S V PDAA + +LI C + EA +F ++ G +PDV Y LI G CR G ++ A+ Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAV 851
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP393_ARATH (Pentatricopeptide repeat-containing protein At5g18950 OS=Arabidopsis thaliana GN=At5g18950 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 38/140 (27.14%), Postives = 68/140 (48.57%), Query Frame = 1 Query: 316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 EA+CIF + +P V + ++ G + + L+ + G+ P+ F YN++I+ K G +SL A + +LR+ + N++I+G C+ + EA +F + G P+ TYN LI G C+ + Sbjct: 301 EAYCIFKNLKDKGYAPDRVV-YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKV 439 HSP 2 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 35/129 (27.13%), Postives = 63/129 (48.84%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALN 750 P ++N+++ G K V + + G + + N +I FC G+ F F + + VTP+A T+N+LI+G C E+++ + L+ +LKA G +P Y L+ L + + +LN Sbjct: 351 PNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLN 479 The following BLAST results are available for this feature:
BLAST of CK932977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932977 ID=CK932977; Name=CK932977; organism=Citrus sinensis; type=EST; length=869bpback to top |