CK932977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR41_ARATH (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana GN=At1g13630 PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 382 NILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 +++L+GL K D L LF ++ + GL PDL Y+I+I+ CK+G+ + + + + P++ T +L+ GLC + ++EA +L L + G D+ YN +I+G ++G I AL Sbjct: 381 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 502 HSP 2 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 40/128 (31.25%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 P V SFN +++G K D F + GL P ++++NILIN C +G ++ + + V PD+ T+N L +G I A + + G PDV TY L+ G C+ G+I + L Sbjct: 234 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 361
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.518e-13 Identity = 47/152 (30.92%), Postives = 74/152 (48.68%), Query Frame = 1 Query: 280 SGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 S GD+ + AF D M++ P ++N L+ GL + +L + G+ D TYNILIN +C+ G FA ++ + P T+ SLI LC +++ EA LF K+ G +PD+ NTL++G C G++ Sbjct: 338 SNNGDLEM-----AFAYRDEMVKQG-MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNM 483 HSP 2 Score: 72.4034 bits (176), Expect = 3.738e-12 Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 1 Query: 316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 +AF + D M+ P + +++ KNK + L F ++ G+ PDL N L++ C +G + F+ + + PD T+N L++GLC E + EA L ++K G +PD +YNTLI+G + G Sbjct: 415 KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL-FEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR9_ARATH (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13 Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 NE + +F+ M+R S P V+ + +L+ G AK+ + + L R+ G PD+ TY++++N CK GRV F + ++ ++SLI GL R+ EA LF ++ GC D + YN LI+ + Sbjct: 344 NEGYTVFENMIRKG-SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR40_ARATH (Pentatricopeptide repeat-containing protein At1g13040, mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13 Identity = 42/136 (30.88%), Postives = 66/136 (48.53%), Query Frame = 1 Query: 316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 +A+ +F+ M R V ++ L+ + + L ++ GL PD Y +++ CK G V + F ++ +TPDA ++NSLI GLC R+ EA LF +K C PD T+ +I GL R Sbjct: 343 KAYRLFEEM-RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIR 477
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13 Identity = 49/162 (30.25%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALNGHNPFGLIIVGESNVK 798 +EA +FD M ++ P V+ ++IL+ + DT L + TGL ++ YN LIN CK G +S ++ + P T+ SL+ G C++ +I +A L+ ++ G P ++T+ TL++GL R G I A+ N + E NVK Sbjct: 384 HEAELLFDRMGKIGLRPNDVT-YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE-----MAEWNVK 539 HSP 2 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 44/169 (26.04%), Postives = 77/169 (45.56%), Query Frame = 1 Query: 265 ERCKSSGEGDINVITPN--------EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 E+CK S +++ + + +F M+ P V + + LL GL K +H+ + LF + S G+ PD++ Y +I C++ +S + + + +N LI GLC + ++ EA + L +PDV TY TL+ GLC+ + L Sbjct: 149 EKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGL 317 HSP 3 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 41/128 (32.03%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 P + +N L+ L K + + LLF R+ GL P+ TY+ILI+ FC+ G++ + G ++ + + +NSLI G C I A ++ EP V TY +L+ G C G I AL Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP404_ARATH (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13 Identity = 44/123 (35.77%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 379 FNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 +N+L+ +K+ + L + G+FPD+FTYN LI+ +CK + R+ RS V P+ T+NS I G E R+ EA LF ++K + TY TLI+G CR I AL Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEAL 327
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13 Identity = 38/125 (30.40%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHII 738 P V ++++++ G K + + F + S + P+ YN LI +C+ GR+S+ + ++P++AT+ SLI+G+ SR+ EA LF +++ G EP+VF Y LI+G + G ++ Sbjct: 621 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 745 HSP 2 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 37/124 (29.84%), Postives = 59/124 (47.58%), Query Frame = 1 Query: 376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 S+N L++G K D + + GL PD +TY+ILI M +V + R+ + PD T++ +I G C R E F ++ + +P+ YN LI CR+G + +AL Sbjct: 555 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 678
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP292_ARATH (Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13 Identity = 52/173 (30.06%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 247 LDKFLKERCKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRIL------RSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLK-AFGCEPDVFTYNTLINGLCRTGHIIVA 744 L +F+ CK++ N A+ I +++ + +P FN LL+ L +N + L +++ + PD+ T ILIN CK RV F ++ + + D+ FN+LI GLC R+ EA L +++K C P+ TYN LI+G CR G + A Sbjct: 262 LTRFISSLCKNA--------RANAAWDILSDLMK-NKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 40/128 (31.25%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 P +SF +++ G K + +D V + ++ G+ + TYNI+I C CK + + A ++ + P++ T++ LI G C+E + EA LF + G +PD Y TLI+ LC+ G AL Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETAL 342
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP401_ARATH (Pentatricopeptide repeat-containing protein At5g28460 OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 52/173 (30.06%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 247 LDKFLKERCKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRIL------RSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLK-AFGCEPDVFTYNTLINGLCRTGHIIVA 744 L +F+ CK++ N A+ I +++ + +P FN LL+ L +N + L +++ + PD+ T ILIN CK RV F ++ + + D+ FN+LI GLC R+ EA L +++K C P+ TYN LI+G CR G + A Sbjct: 262 LTRFISSLCKNA--------RANTAWDILSDLMK-NKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425 The following BLAST results are available for this feature:
BLAST of CK932977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932977 ID=CK932977; Name=CK932977; organism=Citrus sinensis; type=EST; length=869bpback to top |