CK932977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP326_ARATH (Pentatricopeptide repeat-containing protein At4g19895 OS=Arabidopsis thaliana GN=At4g19895 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 46/144 (31.94%), Postives = 67/144 (46.53%), Query Frame = 1 Query: 316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 +AF +F ++R P V ++ ++ G K + +LF R+ GLFP++ TY LIN CK G + + P+ T+N+ I LC +SR EA L K + G E D TY LI C+ I AL Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483 HSP 2 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 1 Query: 376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 ++ IL+ K + L F R+N TG D+ NILI FC+ ++ F ++ + P T+ S+I C E I A F +K GC PD FTY +LI+GLC+ Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580 HSP 3 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 40/114 (35.09%), Postives = 55/114 (48.25%), Query Frame = 1 Query: 382 NILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 NIL+A + K LF + S GL P TY +I+C+CK G + L F + R PD+ T+ SLI GLC +S + EA L+ + G P T TL C+ Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13 Identity = 39/128 (30.47%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALNGHN 759 ++ L+ G + + + L ++ + + P + T+N LI C G+ L F + S + PD +TFNS+I G C E R+ +A + + +PD +T N L+NGLC+ G ALN N Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615 HSP 2 Score: 74.7146 bits (182), Expect = 7.531e-13 Identity = 42/138 (30.43%), Postives = 67/138 (48.55%), Query Frame = 1 Query: 316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 +A + + M+ P ++N +L ++K + L + GL P+ TYN L+ +CK+G + F + ++ V PD T+N LI GLC + E L +K+ +PDV TYNTLI+G G Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359 HSP 3 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 P VS+FN L+ GL + + + F L +GL PD T+N +I +CK GRV F + ++ PD T N L+ GLC E + E A F E D TYNT+I+ C+ Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG-MTEKALNFFNTLIEEREVDTVTYNTMISAFCK 637
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP376_ARATH (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13 Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLING 714 P V +N+L+ GL K K + LF + + L P L TYN LI+ +CK G F R+ + P TFN+L++GL + +A + ++K G PD FT++ L +G Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328 HSP 2 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 37/124 (29.84%), Postives = 62/124 (50.00%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 P V ++NIL+ G + +D + + G P++ +Y LINC CK ++ + V+P +N LI G C++ +I +A ++ G E ++ TYNTLI+GL TG + Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580 HSP 3 Score: 70.8626 bits (172), Expect = 1.088e-11 Identity = 44/140 (31.43%), Postives = 65/140 (46.43%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGH 732 +EA +F + LR P S +LL L K K + + +F + + P F Y I K+ V G F R+ + P +N LI GLC R+ +A LF ++ A P + TYNTLI+G C+ G+ Sbjct: 126 SEAADLF-FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13 Identity = 36/129 (27.91%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALN 750 P ++N++L G + +T L F + + G+ PD T+N +IN FC+ ++ F + + + P ++ ++I+G A R+ + +F ++++ G EP+ TY+TL+ GLC G ++ A N Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP158_ARATH (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13 Identity = 36/122 (29.51%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 370 VSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 + S+NI L GL ++ + + ++ G+ P +++YNIL++ CK+G +S G + R+ V PDA T+ L+ G C+ ++ A +L ++ C P+ +T N L++ L + G I Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447 HSP 2 Score: 71.633 bits (174), Expect = 6.376e-12 Identity = 35/127 (27.56%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVA 744 P +FN+L+ L + D LF + G P+ FT+ IL+ +CK G G + V P+ +N+++ C E R ++ + K++ G PD+ T+N+ I+ LC+ G ++ A Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271 HSP 3 Score: 71.633 bits (174), Expect = 6.376e-12 Identity = 43/129 (33.33%), Postives = 63/129 (48.84%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALN 750 P + +++ LL GL K + LF + L PD YNI I+ FCK G++S F + + T+NSLI GL +++I E L ++K G P++ TYNT I LC + A N Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650 HSP 4 Score: 69.707 bits (169), Expect = 2.423e-11 Identity = 39/128 (30.47%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 P + S+NIL+ GL K + + G+ PD TY L++ +C +G+V + ++R+ P+A T N L+ L RI EA L K+ G D T N +++GLC +G + A+ Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12 Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 379 FNILLAGLAKNKHYDTVLLLF*RLNSTGLF-PDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 +N+ +AGL K + LF L S+ F PD +TY ILI+ G ++ F + + P+ T+N+LI+GLC + A L KL G P+ TYNTLI+GL ++G++ A+ Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAM 845 HSP 2 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 35/126 (27.78%), Postives = 62/126 (49.21%), Query Frame = 1 Query: 370 VSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 V ++ L+ G K + +F L L D Y +L++ +C+ G++ ++ V + NSLI G C +++EA +F ++ + +PD TYNTL++G CR G++ AL Sbjct: 296 VVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.678e-12 Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 N+A+ + + M + P V ++ ++ GLAK D +LF S + ++ Y+ LI+ F K+GR+ + +++ +TP+ T+NSL+ L I EA F +K C P+ TY LINGLC+ Sbjct: 604 NKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739 HSP 2 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 P V F L+ G AK D+ L L + S+ L D+ YN+ I+ F K+G+V + + F I + + PD T+ S+I LC +R+ EA +F L+ P + YNT+I G G Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322 HSP 3 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 42/141 (29.79%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 +EA+ + + R S P V ++N +L L K D L +F + P+L TYNILI+ C+ G++ F + ++ + P+ T N ++ LC ++ EA A+F ++ C PD T+ +LI+GL + G + Sbjct: 325 DEAYSLLERQ-RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463 HSP 4 Score: 69.3218 bits (168), Expect = 3.164e-11 Identity = 41/135 (30.37%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGL 717 +EA+ I + +++ +P + ++N LL L K + + L+ F + P+ TY ILIN CK+ + + F + + + + P ++ ++I GL I EA ALF + KA G PD YN +I GL Sbjct: 674 DEAYLILEELMQKGLTPN-LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 37/120 (30.83%), Postives = 62/120 (51.67%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 P V + L+ G + +F + G+ P+++TY+I+I+ C+ G++S F +L S P+A TFN+L++ R + ++ ++K GCEPD TYN LI CR Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR22_ARATH (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 42/155 (27.10%), Postives = 72/155 (46.45%), Query Frame = 1 Query: 271 CKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 C + G + ++A CI M+ M P ++N+++ L K H T L+L ++ +G PD+ TYN +I C G + L++ P T+ L++ +C A + + GC PD+ TYN+L+N CR G++ Sbjct: 142 CSNLVRGLARIDQLDKAMCILRVMV-MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295 HSP 2 Score: 70.8626 bits (172), Expect = 1.088e-11 Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 ++N LL L ++++D V + + T P + TYNILIN CK +S F ++L PD T+N+++ + E + +A L LK C P + TYN++I+GL + G + AL Sbjct: 316 TYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439 HSP 3 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 37/120 (30.83%), Postives = 58/120 (48.33%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 P V ++NIL+ GL K + + F ++ PD+ TYN ++ K G V G + +C P T+NS+I GL + + +A L+ ++ G PD T +LI G CR Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 36/124 (29.03%), Postives = 62/124 (50.00%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 P S+++ +L L + LLF + GL D++TY I+++ FCK G + F + TP+ T+ +LI ++ A LF + + GC P++ TY+ LI+G C+ G + Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604 HSP 2 Score: 68.9366 bits (167), Expect = 4.133e-11 Identity = 42/140 (30.00%), Postives = 62/140 (44.29%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDA----------------ATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 P V ++ L+ K K LF + S G P++ TY+ LI+ CK G+V F R+ S PD T+ +L+ G C R+ EA L + GCEP+ Y+ LI+GLC+ G + Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690 The following BLAST results are available for this feature:
BLAST of CK932977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932977 ID=CK932977; Name=CK932977; organism=Citrus sinensis; type=EST; length=869bpback to top |