CK932977

Overview
NameCK932977
Unique NameCK932977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP326_ARATH (Pentatricopeptide repeat-containing protein At4g19895 OS=Arabidopsis thaliana GN=At4g19895 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 46/144 (31.94%), Postives = 67/144 (46.53%), Query Frame = 1
Query:  316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747
            +AF +F  ++R     P V ++  ++ G  K    +   +LF R+   GLFP++ TY  LIN  CK G     +     +      P+  T+N+ I  LC +SR  EA  L  K  + G E D  TY  LI   C+   I  AL
Sbjct:  340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483          

HSP 2 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 1
Query:  376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723
            ++ IL+    K    +  L  F R+N TG   D+   NILI  FC+  ++      F  ++   + P   T+ S+I   C E  I  A   F  +K  GC PD FTY +LI+GLC+
Sbjct:  465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 580          

HSP 3 Score: 68.5514 bits (166), Expect = 5.397e-11
Identity = 40/114 (35.09%), Postives = 55/114 (48.25%), Query Frame = 1
Query:  382 NILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723
            NIL+A   + K       LF  + S GL P   TY  +I+C+CK G + L    F  + R    PD+ T+ SLI GLC +S + EA  L+  +   G  P   T  TL    C+
Sbjct:  502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 39/128 (30.47%), Postives = 64/128 (50.00%), Query Frame = 1
Query:  376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALNGHN 759
            ++  L+ G  + +  +  L ++  +    + P + T+N LI   C  G+  L    F  +  S + PD +TFNS+I G C E R+ +A   + +      +PD +T N L+NGLC+ G    ALN  N
Sbjct:  488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615          

HSP 2 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 42/138 (30.43%), Postives = 67/138 (48.55%), Query Frame = 1
Query:  316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729
            +A  + + M+      P   ++N +L  ++K      +  L   +   GL P+  TYN L+  +CK+G +   F     + ++ V PD  T+N LI GLC    + E   L   +K+   +PDV TYNTLI+G    G
Sbjct:  222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359          

HSP 3 Score: 73.9442 bits (180), Expect = 1.285e-12
Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723
            P VS+FN L+ GL  +   +  +  F  L  +GL PD  T+N +I  +CK GRV   F  +   ++    PD  T N L+ GLC E  + E A  F        E D  TYNT+I+  C+
Sbjct:  519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEG-MTEKALNFFNTLIEEREVDTVTYNTMISAFCK 637          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP376_ARATH (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLING 714
            P V  +N+L+ GL K K  +    LF  + +  L P L TYN LI+ +CK G     F    R+    + P   TFN+L++GL     + +A  +  ++K  G  PD FT++ L +G
Sbjct:  212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328          

HSP 2 Score: 71.2478 bits (173), Expect = 8.327e-12
Identity = 37/124 (29.84%), Postives = 62/124 (50.00%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735
            P V ++NIL+ G  +   +D    +   +   G  P++ +Y  LINC CK  ++         +    V+P    +N LI G C++ +I +A     ++   G E ++ TYNTLI+GL  TG +
Sbjct:  457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580          

HSP 3 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 44/140 (31.43%), Postives = 65/140 (46.43%), Query Frame = 1
Query:  313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGH 732
            +EA  +F + LR     P   S  +LL  L K K +   + +F  +  +   P  F Y   I    K+  V  G   F R+    + P    +N LI GLC   R+ +A  LF ++ A    P + TYNTLI+G C+ G+
Sbjct:  126 SEAADLF-FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP190_ARATH (Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 36/129 (27.91%), Postives = 70/129 (54.26%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALN 750
            P   ++N++L G   +   +T L  F  + + G+ PD  T+N +IN FC+  ++      F  +  + + P   ++ ++I+G  A  R+ +   +F ++++ G EP+  TY+TL+ GLC  G ++ A N
Sbjct:  253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP158_ARATH (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 36/122 (29.51%), Postives = 67/122 (54.92%), Query Frame = 1
Query:  370 VSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735
            + S+NI L GL ++  +     +  ++   G+ P +++YNIL++  CK+G +S      G + R+ V PDA T+  L+ G C+  ++  A +L  ++    C P+ +T N L++ L + G I
Sbjct:  326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447          

HSP 2 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 35/127 (27.56%), Postives = 62/127 (48.82%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVA 744
            P   +FN+L+  L  +   D    LF  +   G  P+ FT+ IL+  +CK G    G      +    V P+   +N+++   C E R  ++  +  K++  G  PD+ T+N+ I+ LC+ G ++ A
Sbjct:  145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271          

HSP 3 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 43/129 (33.33%), Postives = 63/129 (48.84%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALN 750
            P + +++ LL GL K   +     LF  +    L PD   YNI I+ FCK G++S  F     + +        T+NSLI GL  +++I E   L  ++K  G  P++ TYNT I  LC    +  A N
Sbjct:  522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650          

HSP 4 Score: 69.707 bits (169), Expect = 2.423e-11
Identity = 39/128 (30.47%), Postives = 63/128 (49.22%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747
            P + S+NIL+ GL K         +   +   G+ PD  TY  L++ +C +G+V    +    ++R+   P+A T N L+  L    RI EA  L  K+   G   D  T N +++GLC +G +  A+
Sbjct:  359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-12
Identity = 43/124 (34.68%), Postives = 66/124 (53.23%), Query Frame = 1
Query:  379 FNILLAGLAKNKHYDTVLLLF*RLNSTGLF-PDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747
            +N+ +AGL K    +    LF  L S+  F PD +TY ILI+     G ++  F     +    + P+  T+N+LI+GLC    +  A  L  KL   G  P+  TYNTLI+GL ++G++  A+
Sbjct:  722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAM 845          

HSP 2 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 35/126 (27.78%), Postives = 62/126 (49.21%), Query Frame = 1
Query:  370 VSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747
            V ++  L+ G  K    +    +F  L    L  D   Y +L++ +C+ G++         ++   V  +    NSLI G C   +++EA  +F ++  +  +PD  TYNTL++G CR G++  AL
Sbjct:  296 VVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.678e-12
Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 1
Query:  313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723
            N+A+ + + M +     P V ++  ++ GLAK    D   +LF    S  +  ++  Y+ LI+ F K+GR+   +     +++  +TP+  T+NSL+  L     I EA   F  +K   C P+  TY  LINGLC+
Sbjct:  604 NKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739          

HSP 2 Score: 72.7886 bits (177), Expect = 2.862e-12
Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729
            P V  F  L+ G AK    D+ L L   + S+ L  D+  YN+ I+ F K+G+V + +  F  I  + + PD  T+ S+I  LC  +R+ EA  +F  L+     P  + YNT+I G    G
Sbjct:  201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322          

HSP 3 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 42/141 (29.79%), Postives = 73/141 (51.77%), Query Frame = 1
Query:  313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735
            +EA+ + +   R   S P V ++N +L  L K    D  L +F  +      P+L TYNILI+  C+ G++   F     + ++ + P+  T N ++  LC   ++ EA A+F ++    C PD  T+ +LI+GL + G +
Sbjct:  325 DEAYSLLERQ-RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463          

HSP 4 Score: 69.3218 bits (168), Expect = 3.164e-11
Identity = 41/135 (30.37%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGL 717
            +EA+ I + +++   +P  + ++N LL  L K +  +  L+ F  +      P+  TY ILIN  CK+ + +  F  +  + +  + P   ++ ++I GL     I EA ALF + KA G  PD   YN +I GL
Sbjct:  674 DEAYLILEELMQKGLTPN-LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12
Identity = 37/120 (30.83%), Postives = 62/120 (51.67%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723
            P V  +  L+ G  +         +F  +   G+ P+++TY+I+I+  C+ G++S     F  +L S   P+A TFN+L++      R  +   ++ ++K  GCEPD  TYN LI   CR
Sbjct:  253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR22_ARATH (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12
Identity = 42/155 (27.10%), Postives = 72/155 (46.45%), Query Frame = 1
Query:  271 CKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735
            C +   G   +   ++A CI   M+ M    P   ++N+++  L K  H  T L+L   ++ +G  PD+ TYN +I C    G        +   L++   P   T+  L++ +C       A  +   +   GC PD+ TYN+L+N  CR G++
Sbjct:  142 CSNLVRGLARIDQLDKAMCILRVMV-MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295          

HSP 2 Score: 70.8626 bits (172), Expect = 1.088e-11
Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747
            ++N LL  L  ++++D V  +   +  T   P + TYNILIN  CK   +S     F ++L     PD  T+N+++  +  E  + +A  L   LK   C P + TYN++I+GL + G +  AL
Sbjct:  316 TYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439          

HSP 3 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 37/120 (30.83%), Postives = 58/120 (48.33%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723
            P V ++NIL+ GL K +     +  F ++      PD+ TYN ++    K G V       G +  +C  P   T+NS+I GL  +  + +A  L+ ++   G  PD  T  +LI G CR
Sbjct:  347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466          
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12
Identity = 36/124 (29.03%), Postives = 62/124 (50.00%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735
            P  S+++ +L  L      +   LLF  +   GL  D++TY I+++ FCK G +      F  +     TP+  T+ +LI       ++  A  LF  + + GC P++ TY+ LI+G C+ G +
Sbjct:  481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604          

HSP 2 Score: 68.9366 bits (167), Expect = 4.133e-11
Identity = 42/140 (30.00%), Postives = 62/140 (44.29%), Query Frame = 1
Query:  364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDA----------------ATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735
            P V ++  L+    K K       LF  + S G  P++ TY+ LI+  CK G+V      F R+  S   PD                  T+ +L+ G C   R+ EA  L   +   GCEP+   Y+ LI+GLC+ G +
Sbjct:  551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690          
The following BLAST results are available for this feature:
BLAST of CK932977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PP326_ARATH5.767e-1331.94Pentatricopeptide repeat-containing protein At4g19... [more]
PP156_ARATH5.767e-1330.47Pentatricopeptide repeat-containing protein At2g16... [more]
PP376_ARATH7.531e-1333.33Pentatricopeptide repeat-containing protein At5g12... [more]
PP190_ARATH7.531e-1327.91Pentatricopeptide repeat-containing protein At2g37... [more]
PP158_ARATH7.531e-1329.51Pentatricopeptide repeat-containing protein At2g17... [more]
PPR50_ARATH1.285e-1234.68Putative pentatricopeptide repeat-containing prote... [more]
PP217_ARATH1.678e-1230.66Pentatricopeptide repeat-containing protein At3g06... [more]
PPR54_ARATH2.191e-1230.83Pentatricopeptide repeat-containing protein At1g20... [more]
PPR22_ARATH2.191e-1227.10Pentatricopeptide repeat-containing protein At1g08... [more]
PPR18_ARATH2.191e-1229.03Pentatricopeptide repeat-containing protein At1g06... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004349_B07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932977 ID=CK932977; Name=CK932977; organism=Citrus sinensis; type=EST; length=869bp
GGGGACCTTGAAAAAAACTCTTCAATGGGATTCGAATCTTGTTGTAATCG
TTCATTCTCTTTTGCTTCAGCACCAATATCAGCTTTCAAATCTAACTTCT
CATCTTTACTTGTTCACTTCCGAGACCTCACTACTCGTACTTCTAATTCT
AATTCCAATTCCAAAAATGAACCCTCATTTCCAGCTACAACAACTAAACG
GAACGATTGGTTACTGCTGACAGCCAAAGTCAAAGACAGAGCCTCCCTCG
ACAAATTCCTGAAAGAAAGATGTAAATCATCAGGTGAAGGTGATATTAAT
GTTATTACTCCTAATGAAGCCTTTTGTATCTTTGATTACATGCTCCGTAT
GCACCCTTCTCCGCCTCCTGTCTCTTCCTTCAATATTTTGCTCGCTGGCC
TCGCTAAGAATAAGCATTATGATACTGTCCTTTTACTCTTCTAGAGACTC
AATTCAACTGGGTTGTTTCCAGATCTTTTTACTTACAATATCTTGATTAA
CTGCTTTTGCAAAATGGGTAGAGTATCTCTTGGTTTTGCGGCTTTTGGGA
GGATACTCAGGTCTTGTGTTACTCCAGATGCTGCTACTTTTAATTCTTTG
ATTCAAGGTTTGTGTGCGGAGAGTAGAATCATGGAGGCTGCCGCATTGTT
TATGAAACTCAAAGCGTTTGGTTGTGAGCCTGATGTTTTTACATACAATA
CTTTGATTAATGGATTGTGTCGAACTGGCCATATAATTGTTGCTCTAAAT
GGACACAATCCATTTGGCCTTATAATAGTTGGTGAGTCAAATGTCAAGTA
GCAGCAGCATGTGTTAGCCTAAAATCCCGATCTGGAGCATCTCATTTGTG
TTGCAAAATGACTTCACCT
back to top