CK932977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 46/167 (27.54%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 235 DRASLDKFLKERCKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 D + L E CK +GD+ E +F M R P + F+ +++ ++ + D L+ F + GL PD Y ILI +C+ G +S+ +L+ D T+N+++ GLC + EA LF ++ PD +T LI+G C+ G++ Sbjct: 339 DSTTYRSLLMEACK---KGDVV-----ETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496 HSP 2 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 36/130 (27.69%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 340 MLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 +LR + + N L+ L + + ++ ++ +G+ +++T NI++N CK G++ ++ V PD T+N+LI ++ + EA L + G P V+TYNT+INGLC+ G Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319 HSP 3 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 43/132 (32.58%), Postives = 61/132 (46.21%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALNGHN 759 P V ++N ++ GL K+ Y+ +F + +GL PD TY L+ CK G V F + V PD F+S++ + +A F +K G PD Y LI G CR G I VA+N N Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434 HSP 4 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 32/128 (25.00%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 P + ++N L++ + + L + G P ++TYN +IN CK G+ F +LRS ++PD+ T+ SL+ C + ++E +F +++ PD+ ++++++ R+G++ AL Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.191e-12 Identity = 42/126 (33.33%), Postives = 62/126 (49.21%), Query Frame = 1 Query: 316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFT 693 +AF F ML P ++ +NIL+ D + LF ++ GL PDL+ YN I FCKM +V +LR + PD T+++LI+ L R EA +F ++ GC PD +T Sbjct: 513 DAFDCFKEMLEWGIEPNEIT-YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637 HSP 2 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 38/129 (29.46%), Postives = 62/129 (48.06%), Query Frame = 1 Query: 343 LRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 L +H P V +F++++ L + K F + G+ P+ TYNILI C G F ++ + ++PD +N+ IQ C ++ +A L + G +PD FTY+TLI L +G Sbjct: 486 LLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG 614 HSP 3 Score: 70.8626 bits (172), Expect = 1.088e-11 Identity = 35/120 (29.17%), Postives = 59/120 (49.17%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCR 723 P + +FN L+G + V + +L G PD+ T++++INC C+ + F F +L + P+ T+N LI+ C+ + LF K+K G PD++ YN I C+ Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR5_ARATH (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.862e-12 Identity = 44/162 (27.16%), Postives = 71/162 (43.83%), Query Frame = 1 Query: 235 DRASLDKFLKERCKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLC 720 D A + L+ C+ D + Y H P + +FNILL+G ++ + F + GL PD+ TYN LI+ +CK + + ++ TPD T+ ++I GL + +A + ++K +GC PDV YN I C Sbjct: 179 DTACFNALLRTLCQEKSMTDARNV----------YHSLKHQFQPDLQTFNILLSGWKSSEEAEA---FFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFC 327
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP340_ARATH (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.738e-12 Identity = 42/124 (33.87%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 ++ IL+ K D + + GL DL Y LI FC G + G A F +L +P A T+N+LI+G C ++ EA+ +F + G P+V+TY LI+GLC G AL Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337 HSP 2 Score: 69.707 bits (169), Expect = 2.423e-11 Identity = 39/131 (29.77%), Postives = 61/131 (46.56%), Query Frame = 1 Query: 343 LRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 +R + P V S+N ++ G + K + L L + +G L T+ ILI+ FCK G++ + + D + SLI+G C + ALF ++ G P TYNTLI G C+ G + Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR67_ARATH (Putative pentatricopeptide repeat-containing protein At1g31840 OS=Arabidopsis thaliana GN=At1g31840 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 38/122 (31.15%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 424 TVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALNGHNPFGLIIVGES 789 T +++ R+ G+ P++ TY ILI C+ GR+ F +G+IL+ + P T++SLI G C + AL+ + G PDV Y L++GL + G ++ A+ F + ++G+S Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR----FSVKMLGQS 491 HSP 2 Score: 69.707 bits (169), Expect = 2.423e-11 Identity = 40/127 (31.50%), Postives = 59/127 (46.46%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVA 744 P V +F L+ G K D LF + G+ PDL Y+ LI+ + K G + +G F + L V D F+S I + A+ ++ ++ G P+V TY LI GLC+ G I A Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410 HSP 3 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 44/136 (32.35%), Postives = 67/136 (49.26%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLC 720 +EA +F M ++ P V++F ++ + L LF R+ GL PD Y LI+ FCK + ++G F + R+ ++ D A N +I L RI +A+ F L EPD+ TYNT+I G C Sbjct: 513 DEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 47/158 (29.75%), Postives = 78/158 (49.37%), Query Frame = 1 Query: 259 LKERCKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGL-AKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 +K CK+ GDIN AF + + M R S P +++ L+ L A ++ + V L ++ G+ PD T+N++IN FC+ G V + ++ P+ +++L+ G C +I EA F ++K G + D Y TL+N CR G Sbjct: 203 VKHHCKN---GDINF-----AFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352 HSP 2 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 37/151 (24.50%), Postives = 69/151 (45.70%), Query Frame = 1 Query: 316 EAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALNGHNPFG 768 EA +F+ M+ P +FN+++ G + + + + G P+++ Y+ L+N FCK+G++ F + ++ + D + +L+ C EA L ++KA C D TYN ++ GL G AL + +G Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWG 400
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP163_ARATH (Pentatricopeptide repeat-containing protein At2g18940 OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.882e-12 Identity = 36/130 (27.69%), Postives = 63/130 (48.46%), Query Frame = 1 Query: 340 MLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 + + H P + FN +L+ +N YD + + GL PDL TYN L++ + + G + +S + PD ++N++I+G C + EA + ++ G P +FTYNT ++G G Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP380_ARATH (Pentatricopeptide repeat-containing protein At5g14080 OS=Arabidopsis thaliana GN=At5g14080 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12 Identity = 40/147 (27.21%), Postives = 74/147 (50.34%), Query Frame = 1 Query: 289 GDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 G ++ + P+ A YM+ P + + + L L ++ D ++ + L+S G F +L +Y+++I+ CK GRV + A + + + PD + +N+LI+ C I A L+ ++ GC+ ++ TYN LI L G Sbjct: 336 GSVSAVDPDSAVEFLVYMVSTGKLPA-IRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEG 481
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP282_ARATH (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12 Identity = 41/127 (32.28%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVA 744 P V ++ L+ GL KN D L + + + G+ D+ Y LI+ FCK + A F +L + P +NSLI G ++ A L+ K+ G D+ TY TLI+GL + G++I+A Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12 Identity = 40/128 (31.25%), Postives = 66/128 (51.56%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 P V+S+N L+ GL + + L + + GL PD T+NIL++ G+ G + R++ V D ++N+ + GL E++ E +LF KLK +PDVFT+ +I G G + A+ Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302 The following BLAST results are available for this feature:
BLAST of CK932977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932977 ID=CK932977; Name=CK932977; organism=Citrus sinensis; type=EST; length=869bpback to top |