CK932977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 38/122 (31.15%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 P + S+N L+ L + + L + + GL PD+ T+N L+ G+ LG + +++ V D T+N+ + GL E++ E LF +LKA G +PDVF++N +I G G Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEG 299
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 38/129 (29.46%), Postives = 60/129 (46.51%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALN 750 P +F +L+ GL Y+ L + G P L Y IL++ K GR+ G + + + PD +N L+ LC E R+ EA + +++ GC+P+ TY +I+G CR LN Sbjct: 254 PNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLN 382
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP241_ARATH (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 47/173 (27.17%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 229 VKDRASLDKFLKERCKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 V D S + + R KS G +TPN A + D M+R P ++N LL+ +++ + D + +F + + PDL+TYN +I+ + + G + F + PDA T+NSL+ E + ++ +++ G D TYNT+I+ + G + +AL Sbjct: 257 VPDLISFNTLINARLKSGG------LTPNLAVELLD-MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11 Identity = 53/177 (29.94%), Postives = 80/177 (45.20%), Query Frame = 1 Query: 226 KVKDR-ASLDKFLK----------ERCKSSGEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLL-F*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLC 720 K+K+R +S+D+F K C SG D +A +FD M++ P V+ F L+ GL K+ L + L G+ P + Y LI C++G +S F + DAA +++LI L R E + + ++ GC+PD TYN LING C Sbjct: 136 KMKERLSSIDEFGKPDACTYNILIHGCSQSGCFD-------DALKLFDEMVKKKVKPTGVT-FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFC 304
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11 Identity = 44/149 (29.53%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 283 GEGDINVITPNEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 G+G +++ A + M R SP P + N++++G ++ D + L + G +YN LI C+ G +S + +S + P+ TFN+LI G C ++ EA+ +F ++KA P+ TYNTLING + G Sbjct: 215 GQGRVDI-----ALRFYREMRRCKISPNPYT-LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11 Identity = 51/177 (28.81%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 247 LDKFLKERCKSSGEGDINVITPNEAFC-----IFDYM----LRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVALN 750 +D+F +R S +NVI NE +DY+ + M+ SP +S FN+++ L K + D + +F + PD +TY L++ CK R+ + +P +N LI GLC + + L + GC P+ TYNTLI+GLC G + A++ Sbjct: 139 VDEFRCKRSVKSFNSVLNVII-NEGLYHRGLEFYDYVVNSNMNMNISPNGLS-FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP141_ARATH (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana GN=At2g01740 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11 Identity = 38/124 (30.65%), Postives = 62/124 (50.00%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 P + SFN L G +K K D V + + P++ TY+ I+ FCK G + L +F + R ++P+ TF LI G C + A +L+ +++ +V TY LI+G C+ G + Sbjct: 127 PDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEM 249
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP164_ARATH (Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.423e-11 Identity = 44/141 (31.21%), Postives = 65/141 (46.10%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHI 735 N+ F + D M R P V+++NIL+ + + D + L G P + +I F K G F + + + PD T ++L+ G C R+ +A LF KL G +PDV YNTLI+G C G I Sbjct: 495 NKVFELIDEM-RSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PP117_ARATH (Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.423e-11 Identity = 41/135 (30.37%), Postives = 64/135 (47.41%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHP--SPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLIN 711 +EA +FD+M+ S P +F +++ LAKN + L R+ STG PD+ TY +I C +V + + PD T+N ++ LC + EA L+ ++ C P V TYN LI+ Sbjct: 320 DEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
BLAST of CK932977 vs. ExPASy Swiss-Prot
Match: PPR77_ARATH (Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11 Identity = 42/145 (28.97%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 313 NEAFCIFDYMLRMHPSPPPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAF-GRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVA 744 ++A I+DY++ ++ S P V + N LL+ L K++ ++ + G D ++ IL+ C G+V +G GR + C+ P+ +N++I G C I A +F +LK G P + T+ T+ING C+ G + + Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294 HSP 2 Score: 69.3218 bits (168), Expect = 3.164e-11 Identity = 39/118 (33.05%), Postives = 59/118 (50.00%), Query Frame = 1 Query: 376 SFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTG 729 S+ L+ K+K YD L ++ G PD+ TY ILI+ G + +++ V+PDAA +N L+ GLC R + A LF ++ PD + Y TLI+G R+G Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499 HSP 3 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 40/128 (31.25%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 364 PPVSSFNILLAGLAKNKHYDTVLLLF*RLNSTGLFPDLFTYNILINCFCKMGRVSLGFAAFGRILRSCVTPDAATFNSLIQGLCAESRIMEAAALFMKLKAFGCEPDVFTYNTLINGLCRTGHIIVAL 747 P + ++ IL+ GL + H D + + +L G+ PD YN+L++ CK GR F +L + PDA + +LI G EA +F G + DV +N +I G CR+G + AL Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540 The following BLAST results are available for this feature:
BLAST of CK932977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932977 ID=CK932977; Name=CK932977; organism=Citrus sinensis; type=EST; length=869bpback to top |