CK933104

Overview
NameCK933104
Unique NameCK933104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.077e-62
Identity = 110/217 (50.69%), Postives = 151/217 (69.59%), Query Frame = 3
Query:  126 SLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDAC 770
            S+I SL + +    +VSS  F+  +  +W+  HV    DG +  L LD  SGA F+S   +LFG++ ++IKL+ G S GTV A+YMSSD PN +E DFEFLGN  G+PY++QTNVY  G+ NRE+R+ LWFDP K+FHTYS+LWN  Q+VF+VD+ PIR++ N   KG+ +P+ Q M V +S+WN + WAT+GG  K DWS  PF+AS+  + IDAC
Sbjct:   17 SIISSLLLWVSQASVVSSGDFNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPNRDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDAC 233          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.713e-62
Identity = 114/228 (50.00%), Postives = 151/228 (66.23%), Query Frame = 3
Query:  114 MAKMSLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSD---GPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIP----FPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDAC 770
            M  + L  +  +    +    +  F+D +   W+ +H     DG+   L+LDN +G GF +K  Y FG  S+++KLVGGDSAG VTA+YM S+   GP  +E DFEFLGN TG+PY++QTNVY NG GNRE R  LWFDPTK++HTYS+LWN  Q+VF VD  PIRV+ N +   +P    FP  + M ++SSIWNADDWAT+GG  KTDW  APF++SYK F ++ C
Sbjct:    1 MTALFLFMTALMASSSIAATPTQSFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDK--VPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGC 226          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 3.543e-62
Identity = 112/214 (52.34%), Postives = 150/214 (70.09%), Query Frame = 3
Query:  132 IFSLFVGLLMVVLVSSAKFDDLYQTSWAFDH--VQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDA 767
            IF     L+    VS+A F+     +W      +  +G  L L+LD  SG+GF SK++YLFGK+ +QIKLV G+SAGTVT FY+ S+G   +E DFEFLGN +G+PY + TNVY  G G++EQ+  LWFDPT  FHTYS+LWN ++++  VD+TPIR   N E  G+ FPK++ M +Y+S+WNADDWAT+GG VKTDWS APF+ASY+   ID+
Sbjct:    6 IFFFTTLLVAAFSVSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKIDS 219          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.918e-61
Identity = 114/224 (50.89%), Postives = 155/224 (69.20%), Query Frame = 3
Query:  108 SSMAKMSLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFD--HVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDID-AC 770
            S++  MS+  SLF+GL ++++V    F+     +W     ++  +G  L L LD  SG+GF SK++YL+GKV +QIKLV G+SAGTVT FY+ S G   +E DFEFLGN +G+PY+V TNVY  G G+REQ+  LWFDPT  FH YS+LWN   +VF +D  PIR   NLE  G+ +PK+Q M +Y S+WNADDWAT+GG VKT+WS  PF+AS+  ++ + AC
Sbjct:    4 STLLVMSI--SLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENAC 225          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.117e-61
Identity = 112/222 (50.45%), Postives = 148/222 (66.67%), Query Frame = 3
Query:  120 KMSLIFSLFVGL-LMVVLVSSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACEC 776
            K  L+ SL + +   VV  S+  F + +  +W         +G  L   LD  SG+GF SK +YLFGK+ +++KLV G+SAGTVTA+Y+SS G   +E DFEFLGN TG PY + TNV+  G G+RE +  LWFDPT +FHTY++ WN   ++FLVD  PIRV  N E  G+ +PK+Q M +YSS+W ADDWAT+GGRVK DWS+APF ASY+ F+ D   C
Sbjct:    7 KQPLLLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFN-DQSSC 227          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.295e-58
Identity = 97/178 (54.49%), Postives = 131/178 (73.60%), Query Frame = 3
Query:  237 GDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDAC 770
            G+ L L+LD +SG+GF S  ++L+GKV +Q+KLV G+SAGTVT FY+ S G   +E DFEFLGN +G PY + TNVY  G G++EQ+  LWFDPT +FHTY ++WN ++V+F +D  PIR   N E  G+PFPK Q M +Y+S+W A+ WAT+GG  KTDWS APF A Y+ +++DAC
Sbjct:   49 GNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDAC 226          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.180e-57
Identity = 104/204 (50.98%), Postives = 138/204 (67.65%), Query Frame = 3
Query:  180 AKFDDLYQTSWAFDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDACECPASVA 791
            A F   +  +W  DH+  +G  L+L LD  +G+   SK  +LFG V + IKLV G+SAGTV A+Y+SS G  H+E DFEFLGN TG+PY + TN+Y  G GNREQ+   WF+PT  FH Y++ WN  +VV+ VD TPIRV  N E +GI +P  Q M V++S+WNA+DWATQGGRVKT+W+ APF+A  + +   AC    SV+
Sbjct:   27 ADFSKNFIVTWGKDHMFMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVS 230          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.883e-55
Identity = 97/191 (50.79%), Postives = 129/191 (67.54%), Query Frame = 3
Query:  234 DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDAC-------ECPAS 785
            DG  L L+LD  SG+GF S  ++L+GK  +Q+KLV G+SAGTVT FY+ S G   +E DFEFLGN +G PY + TNVY  G G++EQ+  LWFDPT  FHTY + WN ++++F VD  PIR   N E  G+PFP  Q M +Y+S+W A+ WAT+GG  KTDWS APF A Y+ ++++ C        CPA+
Sbjct:   48 DGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPAN 238          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.883e-55
Identity = 95/179 (53.07%), Postives = 125/179 (69.83%), Query Frame = 3
Query:  234 DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDAC 770
            DG  L L+LD  SG+GF S  ++L+GK  +Q+KLV G+SAGTVT FY+ S G   +E DFEFLGN +G PY + TNVY  G G++EQ+  LWFDPT  FHTY + WN ++++F VD  PIR   N E  G+PFP  Q M +Y+S+W A+ WAT+GG  KTDWS APF A Y+ +++D C
Sbjct:   48 DGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGC 226          
BLAST of CK933104 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.460e-55
Identity = 96/190 (50.53%), Postives = 129/190 (67.89%), Query Frame = 3
Query:  237 GDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIASYKGFDIDAC-------ECPAS 785
            G  L L+LD  SG+GF S  ++L+GK  +Q+KLV G+SAGTVT FY+ S G   +E DFEFLGN +G PY + TNVY  G G++EQ+  LWFDPT  FHTY + WN ++++F VD  PIR   N E +G+PFP  Q M +Y+S+W A+ WAT+GG  KTDWS APF A Y+ ++++ C        CPA+
Sbjct:   44 GKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVCPAN 233          
The following BLAST results are available for this feature:
BLAST of CK933104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
XTH10_ARATH2.077e-6250.69Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH2.713e-6250.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH3.543e-6252.34Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH21_ARATH3.918e-6150.89Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH5.117e-6150.45Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH20_ARATH5.295e-5854.49Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH26_ARATH1.180e-5750.98Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH1.883e-5550.79Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH1.883e-5553.07Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH2.460e-5550.53Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_F04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933104 ID=CK933104; Name=CK933104; organism=Citrus sinensis; type=EST; length=814bp
GCGGGGACAGATCAGCATCTTATAAGTAGAANNNTCAACTTCCCTCCACN
NNNNNNGGCTTGCTCTGCTCATTCGCTTACTTCCTCTCCCCGTTCTTCTG
TCTTCATTCTTCAATGGCTAAAATGTCTTTGATTTTCAGTCTGTTTGTGG
GTCTTTTAATGGTGGTTTTGGTCAGCTCAGCTAAGTTTGATGATCTTTAT
CAAACAAGCTGGGCTTTTGATCATGTTCAGTATGATGGGGACACTCTCAA
GCTTAACCTCGATAATTATTCCGGAGCTGGGTTTGCGTCAAAGAGCAAGT
ATTTGTTTGGGAAAGTCTCCATCCAAATTAAACTTGTAGGGGGTGACTCT
GCTGGAACTGTCACTGCCTTCTATATGTCATCAGACGGTCCAAATCACAA
CGAGTTCGATTTTGAGTTCCTGGGGAACACTACAGGAGAGCCATACTTAG
TCCAAACCAATGTTTATGTGAATGGTGTGGGCAACAGAGAGCAGAGACTT
GACCTCTGGTTCGACCCAACAAAGGAATTTCATACCTATTCCCTCCTTTG
GAACCAGCGCCAAGTTGTATTTTTGGTGGATGAGACCCCAATTAGAGTGC
ACACTAACTTGGAGCACAAAGGAATTCCCTTTCCAAAGGACCAAGCCATG
GGTGTGTACAGTTCAATATGGAATGCTGATGACTGGGCCACACAGGGGGG
AAGGGTCAAGACTGACTGGAGCCATGCACCTTTTATTGCATCATACAAGG
GCTTTGATATTGATGCATGCGAGTGCCCAGCGTCGGTTGCAGGTGCCGAT
AATGCCAAAAAATG
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