CK933138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 552.747 bits (1423), Expect = 9.434e-157 Identity = 275/289 (95.16%), Postives = 287/289 (99.31%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VIQQAQSGTGKTATFCSGILQQLDYGLV+CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL++GVHV+VGTPGRVFDMLRRQSLRPD +R+FVLDEADEMLSRGFKDQIYDIFQ+LP K+QVGVFSATMPPEAL+ITRKFMNKPVRILVKRDELTLEGIKQF+VNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR+RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG Sbjct: 80 VIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQSLRPDYLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 368
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF415_TOBAC (Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 551.206 bits (1419), Expect = 2.745e-156 Identity = 279/289 (96.54%), Postives = 286/289 (98.96%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VIQQAQSGTGKTATFCSGILQQL Y L+ECQALVLAPTRELAQQIEKVMRALGDYLGVKV ACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPD+I++FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF+VNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIG Sbjct: 80 VIQQAQSGTGKTATFCSGILQQLAYELLECQALVLAPTRELAQQIEKVMRALGDYLGVKVTACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIG 368
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1) HSP 1 Score: 550.821 bits (1418), Expect = 3.585e-156 Identity = 275/289 (95.16%), Postives = 286/289 (98.96%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VIQQAQSGTGKTATFCSG+LQQLD+ L++CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDML+RQSLR DNI++FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFM+KPVRILVKRDELTLEGIKQF+VNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIG Sbjct: 79 VIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIG 367
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1) HSP 1 Score: 548.895 bits (1413), Expect = 1.362e-155 Identity = 275/289 (95.16%), Postives = 285/289 (98.62%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VIQQAQSGTGKTATFCSG+LQQLDY L++CQALVLAPTRELAQQIEKVMRALGDY GVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRPD I++FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFM+KPVRILVKRDELTLEGIKQF+VNVEKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIG Sbjct: 79 VIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIG 367
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A3_ARATH (Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana GN=TIF4A-3 PE=1 SV=1) HSP 1 Score: 540.036 bits (1390), Expect = 6.328e-153 Identity = 271/289 (93.77%), Postives = 281/289 (97.23%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VIQQAQSGTGKTATFCSG+LQQLD LV+CQALVLAPTRELAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+L SGVHVVVGTPGRVFD+LRRQSLR D I++FVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF+VNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQPENYLHRIG Sbjct: 81 VIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIG 369
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 527.709 bits (1358), Expect = 3.250e-149 Identity = 265/276 (96.01%), Postives = 274/276 (99.28%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 830 VIQQAQSGTGKTATFCSG+LQQLDY LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL SGVHVVVGTPGRVFDMLRRQSLRPD+I++FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMN+PVRILVKRD++TLEGIKQF+VNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD Sbjct: 80 VIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNQPVRILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 355
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 8.342e-121 Identity = 217/290 (74.83%), Postives = 250/290 (86.21%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF ILQQL+ L E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+KFM +P+RILVK++ELTLEGIKQF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIG Sbjct: 73 VIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIG 362
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 430.639 bits (1106), Expect = 5.407e-120 Identity = 216/290 (74.48%), Postives = 248/290 (85.52%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIG Sbjct: 73 VIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIG 362
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 430.639 bits (1106), Expect = 5.407e-120 Identity = 216/290 (74.48%), Postives = 248/290 (85.52%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIG Sbjct: 73 VIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIG 362
BLAST of CK933138 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 430.639 bits (1106), Expect = 5.407e-120 Identity = 216/290 (74.48%), Postives = 248/290 (85.52%), Query Frame = 3 Query: 3 VIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 869 VI QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIG Sbjct: 73 VIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIG 362 The following BLAST results are available for this feature:
BLAST of CK933138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933138 ID=CK933138; Name=CK933138; organism=Citrus sinensis; type=EST; length=870bpback to top |