CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_BACCR (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.570e-44
Identity = 83/171 (48.54%), Postives = 125/171 (73.10%), Query Frame = 3 
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L++QDP KDI +++NSPGGS++A MAIYD +Q ++  VST+ +GM+AS  + +L  G KGKR+A+PN+ VMIHQP+GGA GQ  ++EI A+ I+  ++   +I++  TG+  E +Q+D DRD +M+  +A+EY
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKALEY 183
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_RALME (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=clpP PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.250e-43
Identity = 83/183 (45.36%), Postives = 127/183 (69.40%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P     + RG  A D    L +ER+VF+   ++D  A+ +++QLL L++++P KD+ L++NSPGGS+SA +AIYD +Q ++ DV T+ +GM+AS  + +L  G KGKR A+PN+R+MIHQP+GGA GQ  D+EIQAREI++ ++    I+S  TG+  E++ +D DRD +MS  +AV+Y
Sbjct:   23 LGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDY 205
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BACA2 (ATP-dependent Clp protease proteolytic subunit OS=Bacillus amyloliquefaciens (strain FZB42) GN=clpP PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.250e-43
Identity = 83/171 (48.54%), Postives = 124/171 (72.51%), Query Frame = 3 
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++A MAIYD +Q ++  VST+ +GM+AS  + +L  G KGKR+A+PN+ VMIHQP+GGA GQ  ++EI A+ I+  +D   ++++  TG+  E +++D DRD + S  EA+EY
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEY 183
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.250e-43
Identity = 84/171 (49.12%), Postives = 123/171 (71.93%), Query Frame = 3 
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L RERI+FLG  +D  +A+ I++QLL LDA+DP KDI L++NSPGGS++A M I+D ++ +R DV T+  G++AS  + +L  GTKGKR ++P++R+MIHQP+GGA GQ  D+EIQAREI+++K      ++  TG+  E++ +D +RD +MSP EA +Y
Sbjct:   12 RGERAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDY 182
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SHISS (ATP-dependent Clp protease proteolytic subunit OS=Shigella sonnei (strain Ss046) GN=clpP PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.632e-43
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SHIFL (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri GN=clpP PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.632e-43
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SHIF8 (ATP-dependent Clp protease proteolytic subunit OS=Shigella flexneri serotype 5b (strain 8401) GN=clpP PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.632e-43
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SHIDS (ATP-dependent Clp protease proteolytic subunit OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=clpP PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.632e-43
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SHIBS (ATP-dependent Clp protease proteolytic subunit OS=Shigella boydii serotype 4 (strain Sb227) GN=clpP PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.632e-43
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196
[Close]
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_ECOUT (ATP-dependent Clp protease proteolytic subunit OS=Escherichia coli (strain UTI89 / UPEC) GN=clpP PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.632e-43
Identity = 82/183 (44.81%), Postives = 126/183 (68.85%), Query Frame = 3 
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P       RG  + D    L +ER++FL   ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRF +PN+RVMIHQP+GG  GQ  D+EI AREI+  K     +++  TG+S EQ+++D +RDR++S  EAVEY
Sbjct:   14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEY 196
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP2_BACCR9.570e-4448.54ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_RALME1.250e-4345.36ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BACA21.250e-4348.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_ANAVT1.250e-4349.12ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_SHISS1.632e-4344.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIFL1.632e-4344.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIF81.632e-4344.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIDS1.632e-4344.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_SHIBS1.632e-4344.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ECOUT1.632e-4344.81ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
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