CK933165

Overview
NameCK933165
Unique NameCK933165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_DECAR (ATP-dependent Clp protease proteolytic subunit OS=Dechloromonas aromatica (strain RCB) GN=clpP PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.203e-43
Identity = 82/183 (44.81%), Postives = 124/183 (67.76%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            L   P     + RG  A D    L +ER++FL   ++D  A+ +++QLL L+A++P KDI  ++NSPGGS++A M+IYD +Q ++ DVST+ +G +AS  + +L  G KGKRFA+PN+RVMIHQP+GG  GQ  D+ I A+EI+  +D   RI++  +G+  E+++KD DRD ++S  EA EY
Sbjct:   14 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDVTANLVVAQLLFLEAENPDKDIYFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLNAGAKGKRFALPNSRVMIHQPLGGFQGQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERIEKDTDRDNFLSAAEAAEY 196          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_BACSU (ATP-dependent Clp protease proteolytic subunit OS=Bacillus subtilis GN=clpP PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 6.203e-43
Identity = 83/171 (48.54%), Postives = 123/171 (71.93%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ IDD VA++I+SQLL L A+DP K+I L++NSPGGS++A MAIYD +Q ++  VST+ +GM+AS  + +L  G KGKR+A+PN+ VMIHQP+GGA GQ  ++EI A+ I+  +D   ++++  TG+  E +++D DRD + S  EA+EY
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_BACSK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus clausii (strain KSM-K16) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.203e-43
Identity = 81/171 (47.37%), Postives = 123/171 (71.93%), Query Frame = 3
Query:  258 RGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            RG  A D    L ++RI+ LG+ +DD VA++I++Q+L L A+DP KDI L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS  + +L  G KGKR A+PN+ VMIHQP+GG  GQ  D+EI AR I+  ++   +I++  +G+ +E++ +D DRD +M+  +A EY
Sbjct:   13 RGERAYDIYSRLLKDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEVMIHQPLGGMQGQAADMEIHARRIIQMREKLNQIMAERSGQPYERIARDTDRDNFMTAEQAKEY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_SACD2 (ATP-dependent Clp protease proteolytic subunit OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=clpP PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.101e-43
Identity = 78/173 (45.09%), Postives = 120/173 (69.36%), Query Frame = 3
Query:  249 TAMRGAEADAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            TA      D    L +ER++FL   ++D +A+ +++Q+L L+A++P KDI L++NSPGGS++A ++IYD +Q ++ DVST+ +G + S  + +L  G KGKRF +PN R MIHQP GGA GQ  D+ IQA+EI+  ++    I++G TGR  E++ +D +RDR+MS  E+VEY
Sbjct:   26 TARGERSYDIYSRLLKERVIFLVGQVEDHMANLVVAQMLFLEAENPDKDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTMCIGQACSMGAFLLTAGAKGKRFCLPNARTMIHQPSGGAQGQASDIHIQAQEILKLRERLNEIMAGHTGRGVEEIARDTERDRFMSAHESVEY 198          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_PROVI (ATP-dependent Clp protease proteolytic subunit OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=clpP PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.101e-43
Identity = 89/182 (48.90%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  225 SSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            S  P    T+ RG  A D    L RERI+FLG+ ID+ VA  I++QL+ L+++DP +DI ++VNSPGGS+SA + IYD +Q +R DVSTV +GM+AS  + +L  G KGKR ++P++R+MIHQP GGA GQ  D+ IQAREI   +     I++  TG+  +QV++D +RDR+M   EA+EY
Sbjct:   27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPDRDIFIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEIMAKHTGKDVQQVREDSERDRWMDAGEALEY 208          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_LACBA (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=clpP PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.101e-43
Identity = 86/183 (46.99%), Postives = 128/183 (69.95%), Query Frame = 3
Query:  222 LSSAPQTPATAMRGAEA-DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            ++  P     + RG  A D    L ++RI+ L   I+D +A+AII+QLL LDAQD TKDI L++NSPGG +S+ +AIYD +  +++DV T+ LGM+AS AS++   GTKGKRFA+P+ +VMIHQP GGA GQ  ++EI AREI+  ++   +I++  +G+  E++ +D +RD Y+S  EAV+Y
Sbjct:    1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDDMANAIIAQLLFLDAQDSTKDISLYINSPGGVVSSGLAIYDTMNFIQSDVQTITLGMAASMASVLASSGTKGKRFALPHAQVMIHQPSGGAQGQQTEIEIAAREILKTRELINKILAENSGQPIERLNQDTERDNYLSAQEAVDY 183          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.101e-43
Identity = 80/165 (48.48%), Postives = 119/165 (72.12%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L RERI+FLG  +DD +A+ I++ +L LD++DP KDI L++NSPGGS++A MAIYD +Q +++DV T+ +G++AS  S +L  GTKGKR A+P++R+MIHQP GG  GQ  D+EI+AREI+  +     + +  TG+  E++++D+DRD +MS  EA  Y
Sbjct:   22 DIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAKNY 186          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_THET8 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpP PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.058e-42
Identity = 83/165 (50.30%), Postives = 119/165 (72.12%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L ++RI+FLG  ID  VA+ +++QLL LDAQ+P ++I+L++NSPGG + A +AIYD +Q VRA VST+ +GM+AS A++IL  G KG+R+A+P+ +VMIHQP GG  G   D+ IQA+EI+  K     I++  TG+  E+V+KD DRD Y+S  EA+EY
Sbjct:   18 DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEY 182          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP_THET2 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpP PE=3 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.058e-42
Identity = 83/165 (50.30%), Postives = 119/165 (72.12%), Query Frame = 3
Query:  273 DAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            D    L ++RI+FLG  ID  VA+ +++QLL LDAQ+P ++I+L++NSPGG + A +AIYD +Q VRA VST+ +GM+AS A++IL  G KG+R+A+P+ +VMIHQP GG  G   D+ IQA+EI+  K     I++  TG+  E+V+KD DRD Y+S  EA+EY
Sbjct:   18 DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEY 182          
BLAST of CK933165 vs. ExPASy Swiss-Prot
Match: CLPP5_ARATH (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.058e-42
Identity = 85/183 (46.45%), Postives = 127/183 (69.40%), Query Frame = 3
Query:  219 PLSSAPQTPATAMRGAEADAMGLLPRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRVMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEY 767
            P  +  Q P   ++      +  L + RI+  G  +DD +A+ I++QLL LDA DPTKDI ++VNSPGGS++A MAI+D ++ +R DVSTV +G++AS  + +L  GTKGKR+++PN+R+MIHQP+GGA G   D++IQA E++H+K N    ++  TG+S E++ +D DRD +MS  EA EY
Sbjct:   96 PAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEY 278          
The following BLAST results are available for this feature:
BLAST of CK933165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_DECAR6.203e-4344.81ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BACSU6.203e-4348.54ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_BACSK6.203e-4347.37ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_SACD28.101e-4345.09ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PROVI8.101e-4348.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_LACBA8.101e-4346.99ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_THEEB8.101e-4348.48ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_THET81.058e-4250.30ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THET21.058e-4250.30ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP5_ARATH1.058e-4246.45ATP-dependent Clp protease proteolytic subunit 5, ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933165 ID=CK933165; Name=CK933165; organism=Citrus sinensis; type=EST; length=808bp
TTTTTTTTTTTCTTTGAACACTAATGGATTTGCTTTCAGTCTCTTCCGCT
TCAACCTCTCACCTCCCTTTTTCTCTTTACAAACCCCCCAATTTCTCACT
CTCTAAATCTTTGCCTCTCTCTTTTAAACCCATTTCTTCTGTTAAAACTC
AAAGAATCTCAACCAAAACCCTAGCTCTACAGCAACAGCAACAGCAGCAG
CAATGGCAACACGATGTTCCTTTGTCTTCGGCCCCTCAGACACCGGCCAC
CGCCATGCGCGGCGCCGAAGCCGACGCCATGGGCCTCCTGCCCAGGGAAA
GAATTGTTTTCTTGGGTAATAACATTGACGATTTCGTTGCTGACGCCATC
ATCAGTCAGCTCCTCTTATTGGACGCTCAGGACCCCACCAAAGATATCAG
GCTGTTCGTCAACTCCCCCGGTGGCTCTCTCAGTGCCACAATGGCTATAT
ATGATGTGGTGCAGCTTGTGCGAGCAGACGTGTCCACGGTTGCGCTAGGC
ATGTCAGCATCAACTGCTTCGTTAATTCTTGGTGGTGGGACGAAAGGGAA
GCGGTTTGCAATGCCCAACACTCGGGTAATGATTCATCAGCCTATGGGAG
GAGCTAGTGGGCAAGTATTAGATGTGGAAATTCAAGCAAGAGAAATCATG
CATAACAAGGATAATTTCACAAGAATTATATCTGGTTTTACTGGTCGTTC
GTTTGAGCAAGTGCAAAAGGATATTGATAGGGATCGGTACATGTCTCCGA
TTGAAGCAGTTGAATATGGGATTATTGATGGGAGTATTGATAGAGACAGT
ATTATTCC
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